FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4119, 474 aa 1>>>pF1KE4119 474 - 474 aa - 474 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4689+/-0.000994; mu= 9.3083+/- 0.060 mean_var=195.1876+/-42.451, 0's: 0 Z-trim(111.3): 145 B-trim: 472 in 1/54 Lambda= 0.091801 statistics sampled from 12068 (12237) to 12068 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.376), width: 16 Scan time: 3.380 The best scores are: opt bits E(32554) CCDS5678.1 TRIM4 gene_id:89122|Hs108|chr7 ( 474) 3276 446.6 2.7e-125 CCDS5679.1 TRIM4 gene_id:89122|Hs108|chr7 ( 500) 2273 313.8 2.7e-85 CCDS4654.1 TRIM27 gene_id:5987|Hs108|chr6 ( 513) 842 124.2 3.1e-28 CCDS31048.1 TRIM11 gene_id:81559|Hs108|chr1 ( 468) 816 120.8 3.2e-27 CCDS1571.1 TRIM17 gene_id:51127|Hs108|chr1 ( 477) 774 115.2 1.5e-25 CCDS34375.1 TRIM10 gene_id:10107|Hs108|chr6 ( 481) 748 111.8 1.7e-24 CCDS44327.1 TRIM17 gene_id:51127|Hs108|chr1 ( 343) 745 111.2 1.8e-24 CCDS1636.1 TRIM58 gene_id:25893|Hs108|chr1 ( 486) 741 110.8 3.2e-24 CCDS44525.1 TRIM21 gene_id:6737|Hs108|chr11 ( 475) 723 108.5 1.7e-23 CCDS31356.1 TRIM68 gene_id:55128|Hs108|chr11 ( 485) 693 104.5 2.6e-22 CCDS34378.1 TRIM39 gene_id:56658|Hs108|chr6 ( 488) 667 101.0 2.9e-21 CCDS78121.1 RPP21 gene_id:202658|Hs108|chr6 ( 503) 667 101.1 2.9e-21 CCDS31393.1 TRIM5 gene_id:85363|Hs108|chr11 ( 493) 656 99.6 8e-21 CCDS31391.1 TRIM34 gene_id:53840|Hs108|chr11 ( 488) 634 96.7 6e-20 CCDS31388.1 TRIM34 gene_id:445372|Hs108|chr11 ( 842) 634 96.9 8.7e-20 CCDS4676.1 TRIM10 gene_id:10107|Hs108|chr6 ( 395) 624 95.3 1.3e-19 CCDS2015.1 TRIM43 gene_id:129868|Hs108|chr2 ( 446) 623 95.2 1.5e-19 CCDS31390.1 TRIM6 gene_id:117854|Hs108|chr11 ( 488) 617 94.4 2.8e-19 CCDS31389.1 TRIM6 gene_id:117854|Hs108|chr11 ( 516) 617 94.4 2.9e-19 CCDS3808.1 TRIM60 gene_id:166655|Hs108|chr4 ( 471) 610 93.5 5.3e-19 CCDS34377.1 TRIM39 gene_id:56658|Hs108|chr6 ( 518) 602 92.5 1.2e-18 CCDS32220.1 TRIM69 gene_id:140691|Hs108|chr15 ( 500) 601 92.3 1.3e-18 CCDS4568.1 TRIM38 gene_id:10475|Hs108|chr6 ( 465) 597 91.8 1.7e-18 CCDS4462.1 TRIM7 gene_id:81786|Hs108|chr5 ( 511) 570 88.2 2.2e-17 CCDS73363.1 TRIM64 gene_id:120146|Hs108|chr11 ( 449) 568 87.9 2.4e-17 CCDS4677.1 TRIM15 gene_id:89870|Hs108|chr6 ( 465) 567 87.8 2.7e-17 CCDS53694.1 TRIM49C gene_id:642612|Hs108|chr11 ( 452) 560 86.8 5e-17 CCDS55762.1 TRIM49B gene_id:283116|Hs108|chr11 ( 452) 560 86.8 5e-17 CCDS8287.1 TRIM49 gene_id:57093|Hs108|chr11 ( 452) 559 86.7 5.5e-17 CCDS53693.1 TRIM64B gene_id:642446|Hs108|chr11 ( 449) 558 86.6 6e-17 CCDS3851.1 TRIML1 gene_id:339976|Hs108|chr4 ( 468) 558 86.6 6.2e-17 CCDS31392.1 TRIM5 gene_id:85363|Hs108|chr11 ( 326) 554 85.9 7e-17 CCDS31394.1 TRIM5 gene_id:85363|Hs108|chr11 ( 347) 554 85.9 7.3e-17 CCDS60930.1 TRIM49D1 gene_id:399939|Hs108|chr11 ( 452) 544 84.7 2.2e-16 CCDS6056.2 TRIM35 gene_id:23087|Hs108|chr8 ( 493) 544 84.8 2.3e-16 CCDS34374.1 TRIM31 gene_id:11074|Hs108|chr6 ( 425) 536 83.6 4.4e-16 CCDS41612.1 TRIM22 gene_id:10346|Hs108|chr11 ( 498) 518 81.3 2.5e-15 CCDS73287.1 TRIM64C gene_id:646754|Hs108|chr11 ( 450) 512 80.5 4.1e-15 CCDS4466.1 TRIM41 gene_id:90933|Hs108|chr5 ( 630) 493 78.1 3e-14 CCDS4465.1 TRIM41 gene_id:90933|Hs108|chr5 ( 518) 468 74.7 2.6e-13 CCDS32437.1 TRIM72 gene_id:493829|Hs108|chr16 ( 477) 459 73.5 5.6e-13 CCDS60929.1 TRIM77 gene_id:390231|Hs108|chr11 ( 450) 436 70.4 4.4e-12 CCDS376.1 TRIM62 gene_id:55223|Hs108|chr1 ( 475) 421 68.5 1.8e-11 CCDS4614.1 BTN1A1 gene_id:696|Hs108|chr6 ( 526) 409 66.9 5.9e-11 CCDS7947.2 TRIM48 gene_id:79097|Hs108|chr11 ( 224) 397 64.9 9.8e-11 >>CCDS5678.1 TRIM4 gene_id:89122|Hs108|chr7 (474 aa) initn: 3276 init1: 3276 opt: 3276 Z-score: 2362.9 bits: 446.6 E(32554): 2.7e-125 Smith-Waterman score: 3276; 100.0% identity (100.0% similar) in 474 aa overlap (1-474:1-474) 10 20 30 40 50 60 pF1KE4 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 LRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQTHAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 LRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQTHAM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 APIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMRISTEFSKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 APIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMRISTEFSKL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 HNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEVGEKSQAPTLELLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 HNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEVGEKSQAPTLELLQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 NPKEVLTRSEIQDVNYSLEAVKVKTVCQIPLMKEMLKRFQVAVNLAEDTAHPKLVFSQEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 NPKEVLTRSEIQDVNYSLEAVKVKTVCQIPLMKEMLKRFQVAVNLAEDTAHPKLVFSQEG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 RYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFVERFQHLPCVLGKNVFTSGKHYWEVES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 RYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFVERFQHLPCVLGKNVFTSGKHYWEVES 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 RDSLEVAVGVCREDVMGITDRSKMSPDVGIWAIYWSAAGYWPLIGFPGTPTQQEPALHRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 RDSLEVAVGVCREDVMGITDRSKMSPDVGIWAIYWSAAGYWPLIGFPGTPTQQEPALHRV 370 380 390 400 410 420 430 440 450 460 470 pF1KE4 GVYLDRGTGNVSFYSAVDGVHLHTFSCSSVSRLRPFFWLSPLASLVIPPVTDRK :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 GVYLDRGTGNVSFYSAVDGVHLHTFSCSSVSRLRPFFWLSPLASLVIPPVTDRK 430 440 450 460 470 >>CCDS5679.1 TRIM4 gene_id:89122|Hs108|chr7 (500 aa) initn: 3262 init1: 2273 opt: 2273 Z-score: 1644.7 bits: 313.8 E(32554): 2.7e-85 Smith-Waterman score: 3214; 94.8% identity (94.8% similar) in 500 aa overlap (1-474:1-500) 10 20 30 40 50 60 pF1KE4 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPSAPAA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 LRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQTHAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 LRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQEHQTHAM 70 80 90 100 110 120 130 140 150 pF1KE4 APIDEAFESYR--------------------------EKLLKSQRNLVAKMKKVMHLQDV ::::::::::: ::::::::::::::::::::::: CCDS56 APIDEAFESYRTGNFDIHVDEWKRRLIRLLLYHFKQEEKLLKSQRNLVAKMKKVMHLQDV 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE4 EVKNATQWKDKIKSQRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 EVKNATQWKDKIKSQRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLN 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE4 QTIASLKKLILEVGEKSQAPTLELLQNPKEVLTRSEIQDVNYSLEAVKVKTVCQIPLMKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 QTIASLKKLILEVGEKSQAPTLELLQNPKEVLTRSEIQDVNYSLEAVKVKTVCQIPLMKE 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE4 MLKRFQVAVNLAEDTAHPKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MLKRFQVAVNLAEDTAHPKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFV 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE4 ERFQHLPCVLGKNVFTSGKHYWEVESRDSLEVAVGVCREDVMGITDRSKMSPDVGIWAIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 ERFQHLPCVLGKNVFTSGKHYWEVESRDSLEVAVGVCREDVMGITDRSKMSPDVGIWAIY 370 380 390 400 410 420 400 410 420 430 440 450 pF1KE4 WSAAGYWPLIGFPGTPTQQEPALHRVGVYLDRGTGNVSFYSAVDGVHLHTFSCSSVSRLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 WSAAGYWPLIGFPGTPTQQEPALHRVGVYLDRGTGNVSFYSAVDGVHLHTFSCSSVSRLR 430 440 450 460 470 480 460 470 pF1KE4 PFFWLSPLASLVIPPVTDRK :::::::::::::::::::: CCDS56 PFFWLSPLASLVIPPVTDRK 490 500 >>CCDS4654.1 TRIM27 gene_id:5987|Hs108|chr6 (513 aa) initn: 714 init1: 321 opt: 842 Z-score: 620.3 bits: 124.2 E(32554): 3.1e-28 Smith-Waterman score: 887; 32.9% identity (59.9% similar) in 514 aa overlap (3-471:7-493) 10 20 30 40 50 pF1KE4 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPS :: .:.: :::.::.:: .:. ..::::.: .:: : :. . ::.::. CCDS46 MASGSVAECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETF 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 APAALRPNWALARLTEKT-QRRRLGPVPPG----LCGRHWEPLRLFCEDDQRPVCLVCRE .::: :: .:. . : : : :: .: .: :::.:.::.:: :.:.:: . CCDS46 PQRHMRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDR 70 80 90 100 110 120 120 130 140 150 160 pF1KE4 SQEHQTHAMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKS--- :.::. :.. :..:: :...:.. .: . ..:.: :. . .. : . .. : CCDS46 SREHRGHSVLPLEEAVEGFKEQI----QNQLDHLKRVKDLKKRRRAQGEQARAELLSLTQ 130 140 150 160 170 170 180 190 200 210 220 pF1KE4 -QRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEV .: .: :: .:.. : :.: .: ::.. . ...: ... .:. :..:: .. CCDS46 MEREKIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSSLIAQL 180 190 200 210 220 230 230 240 250 260 pF1KE4 GEKSQAPTLELLQNPKEVLTRSE-------------IQD-----------VNYSLEAVKV ::.: :: ::::. ..:.:.: .:. .. ::. CCDS46 EEKQQQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTE 240 250 260 270 280 290 270 280 290 300 310 320 pF1KE4 KTVCQIPLMKEM--LKRFQVAVNLAEDTAHPKLVFSQEGRYVKNTASASSWPVFSSAWNY : .. ..:. . ..: :.: :::.:.:..:.. : :. . .. : CCDS46 KMQSDMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLP-------- 300 310 320 330 340 330 340 350 360 370 pF1KE4 FAGWRNPQKTAFVERFQHLPCVLGKNVFTSGKHYWEVESRDSLEVAVGVCREDVM---GI :: :::. .:::::. : .:.:::::: :. . ..:::...: :. CCDS46 ----DNP------ERFNLFPCVLGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGV 350 360 370 380 390 380 390 400 410 420 430 pF1KE4 TDRSKMSPDVGIWAI-YWSAAGYWPLIGFPGTPTQQEPALHRVGVYLDRGTGNVSFYSAV :. .:. :.::. : . :: : . : : . :.:::..:: .:.::::... CCDS46 TS----APQNGFWAVSLWYGKEYWALTS-PMTALPLRTPLQRVGIFLDYDAGEVSFYNVT 400 410 420 430 440 450 440 450 460 470 pF1KE4 DGVHLHTFSCSSV-SRLRPFFWLS-----PLASLVIPPVTDRK . : ::: .. . .::.: :: : :.: :.. CCDS46 ERCHTFTFSHATFCGPVRPYFSLSYSGGKSAAPLIICPMSGIDGFSGHVGNHGHSMETSP 460 470 480 490 500 510 >>CCDS31048.1 TRIM11 gene_id:81559|Hs108|chr1 (468 aa) initn: 1059 init1: 399 opt: 816 Z-score: 602.2 bits: 120.8 E(32554): 3.2e-27 Smith-Waterman score: 1078; 39.9% identity (64.1% similar) in 471 aa overlap (5-468:9-451) 10 20 30 40 50 pF1KE4 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPS ..::: :: :::::: ::: .::::::: :..: :. ::. :::::. : CCDS31 MAAPDLSTNLQEEATCAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRELS 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 APAALRPNWALARLTEKTQRRRL---GPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRESQ :::: ::...: . ::: .::: :.: : ::: :: :. : .: .:..: CCDS31 PQRNLRPNRPLAKMAEMA--RRLHPPSPVPQGVCPAHREPLAAFCGDELRLLCAACERSG 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 EHQTHAMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMRI :: .: . :...: :. . :: :: ..: .:. .. .: .. . :. ..:::. . CCDS31 EHWAHRVRPLQDAAEDLKAKLEKSLEHLRKQMQDALLFQAQADETCVLWQKMVESQRQNV 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 STEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEVGEKSQA :: .:. .:.:::. .::::..:: :. .: :.. .:.: : : .:: :. . : CCDS31 LGEFERLRRLLAEEEQQLLQRLEEEELEVLPRLREGAAHLGQQSAHLAELIAELEGRCQL 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 PTLELLQNPKEVLTRSEIQDVNYSLEAV---KVKTVCQIPLMKEMLKRFQVAVNLAEDTA :.: :::. :..: : .:::. . : ...:::..: . : :.::. :.: ::: CCDS31 PALGLLQDIKDALRR--VQDVKLQPPEVVPMELRTVCRVPGLVETLRRFRGDVTLDPDTA 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 HPKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFVERFQHLPCVLGKNVFT .:.:..:.. : :. .. : .: :::. :::::.. :: CCDS31 NPELILSEDRRSVQRGDLRQALP------------DSP------ERFDPGPCVLGQERFT 300 310 320 330 360 370 380 390 400 410 pF1KE4 SGKHYWEVESRDSLEVAVGVCREDVMGITDRSKMSPDVGIWAIYWSAAGYWPLIGFPGTP ::.:::::: : :.:::::.: . .....: :.: . . .. :. .: CCDS31 SGRHYWEVEVGDRTSWALGVCRENV-NRKEKGELSAGNGFWILVFLGS-YYNSSERALAP 340 350 360 370 380 390 420 430 440 450 460 pF1KE4 TQQEPALHRVGVYLDRGTGNVSFYSAVDGVHLHTFSCSSVS-RLRPFFWLSPLASLVIPP .. : .:::..:: .:..:::::.:: : : : :::.: :::.: : CCDS31 LRDPP--RRVGIFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLF--SPLSSSPTPM 400 410 420 430 440 450 470 pF1KE4 VTDRK CCDS31 TICRPKGGSGDTLAPQ 460 >>CCDS1571.1 TRIM17 gene_id:51127|Hs108|chr1 (477 aa) initn: 987 init1: 452 opt: 774 Z-score: 572.0 bits: 115.2 E(32554): 1.5e-25 Smith-Waterman score: 1023; 39.0% identity (63.7% similar) in 490 aa overlap (3-471:7-472) 10 20 30 40 pF1KE4 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNW--APGG-------GPF :. .::: :: :::::: ::: :::::::.:.. .: : : : : CCDS15 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE4 PCPECRHPSAPAALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCL ::::::. : : :: :....: .:.. : :: .: :::.:::. :: :.:. CCDS15 PCPECREMSPQRNLLPNRLLTKVAEMAQQHP-GLQKQDLCQEHHEPLKLFCQKDQSPICV 70 80 90 100 110 110 120 130 140 150 160 pF1KE4 VCRESQEHQTHAMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIK :::::.::. : . : .:: ..:. :: .... : .. .. .:: : .. ..:. :.: CCDS15 VCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVK 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE4 SQRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEV .: :: :: :.. .:::::. .:: :. ::::: ..: :.. :.. ::. :.:.. CCDS15 ERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQL 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE4 GEKSQAPTLELLQNPKEVLTRSEIQDVNYSLEA--VKVKTVCQIPLMKEMLKRFQVAVNL :.: :..::. :: :.:.. .:. : .. .:::..: . :.:. : : CCDS15 EERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLEDVVP 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE4 AEDTAHPKLVF--SQEGRYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFVERFQHLPCV .:.: :.. :.. ::. .. .:. : : .:: ::. CCDS15 DATSAYPYLLLYESRQRRYLGSSPEGSG---FCSK----------------DRFVAYPCA 300 310 320 330 340 350 360 370 380 390 400 pF1KE4 LGKNVFTSGKHYWEVE---SRDSLEVAVGVCREDVMGITDRSKMSPDVGIWAIYWSAAGY .:...:.::.::::: . :.: :.::::..: . :: :. :.:.. : : CCDS15 VGQTAFSSGRHYWEVGMNITGDALW-ALGVCRDNV-SRKDRVPKCPENGFWVVQLSK-GT 350 360 370 380 390 410 420 430 440 450 pF1KE4 WPLIGFPG-TPTQ-QEPALHRVGVYLDRGTGNVSFYSAVDGVHLHTFSCSSV-SRLRPFF : : . ::.. .:: : .:..:: .:.:::::. :: ::::.: .. . :.::: CCDS15 KYLSTFSALTPVMLMEPPSH-MGIFLDFEAGEVSFYSVSDGSHLHTYSQATFPGPLQPFF 400 410 420 430 440 450 460 470 pF1KE4 WLSPLAS--LVIPPVTDRK :. : .:: :: CCDS15 CLGAPKSGQMVISTVTMWVKG 460 470 >>CCDS34375.1 TRIM10 gene_id:10107|Hs108|chr6 (481 aa) initn: 730 init1: 330 opt: 748 Z-score: 553.3 bits: 111.8 E(32554): 1.7e-24 Smith-Waterman score: 765; 31.5% identity (60.2% similar) in 483 aa overlap (6-459:10-470) 10 20 30 40 50 pF1KE4 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGP----FP-CPE . .:..:::: ...::.:.:::::::.:: : . :: : :: CCDS34 MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRACLTR-YCEIPGPDLEESPTCPL 10 20 30 40 50 60 70 80 90 100 pF1KE4 CRHPSAPAALRPNWALARLTEKTQRRRL----GPVPPGLCGRHWEPLRLFCEDDQRPVCL :..: :...:::: :: ..:. .: .: : .: .: : . .:::::. .:. CCDS34 CKEPFRPGSFRPNWQLANVVENIERLQLVSTLGLGEEDVCQEHGEKIYFFCEDDEMQLCV 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE4 VCRESQEHQTHAMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIK ::::. :: ::.: ...: :::.. : . : . ......:. : : ... CCDS34 VCREAGEHATHTMRFLEDAAAPYREQIHKCLKCLRKEREEIQEIQSRENKRMQVLLTQVS 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE4 SQRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEV ..:... .::..:..:: :.....: .:.... . .. .: : . : .. :: :. CCDS34 TKRQQVISEFAHLRKFLEEQQSILLAQLESQDGDILRQRDEFDLLVAGEICRFSALIEEL 180 190 200 210 220 230 230 240 250 260 270 pF1KE4 GEKSQAPTLELLQNPKEVLTRSEI----QDVNYSLE-AVKVKTVCQ--IPLMKEM---LK ::.. :. ::: . . .: : : . : : : . ... : .::..:: :. CCDS34 EEKNERPARELLTDIRSTLIRCETRKCRKPVAVSPELGQRIRDFPQQALPLQREMKMFLE 240 250 260 270 280 290 280 290 300 310 320 330 pF1KE4 R--FQVA-----VNLAEDTAHPKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWRNPQK . :.. ..: .:.::::..:.. . .. :: :. . ::: CCDS34 KLCFELDYEPAHISLDPQTSHPKLLLSEDHQRAQ----------FSYKWQ--NSPDNPQ- 300 310 320 330 340 340 350 360 370 380 pF1KE4 TAFVERFQHLPCVLGKNVFTSGKHYW--EVESRDSLEVAVGVCREDVMGITDRSKMSPDV ::.. :::... .:.:.: : .. . .::: :::. . .. :. CCDS34 -----RFDRATCVLAHTGITGGRHTWVVSIDLAHGGSCTVGVVSEDVQR-KGELRLRPEE 350 360 370 380 390 400 390 400 410 420 430 440 pF1KE4 GIWAIYWSAAGYWPLIG-FPGTPTQQEPALHRVGVYLDRGTGNVSFYSAVDGVHLHTFSC :.::. : :. .: :: : .: ..: : :: .: :.: .:: ..::. CCDS34 GVWAVRL-AWGFVSALGSFPTRLTLKEQP-RQVRVSLDYEVGWVTFTNAVTREPIYTFTA 410 420 430 440 450 450 460 470 pF1KE4 SSVSRLRPFFWLSPLASLVIPPVTDRK : . .. ::: : CCDS34 SFTRKVIPFFGLWGRGSSFSLSS 460 470 480 >>CCDS44327.1 TRIM17 gene_id:51127|Hs108|chr1 (343 aa) initn: 724 init1: 452 opt: 745 Z-score: 553.0 bits: 111.2 E(32554): 1.8e-24 Smith-Waterman score: 745; 41.7% identity (67.7% similar) in 288 aa overlap (3-279:7-293) 10 20 30 40 pF1KE4 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNW--APGG-------GPF :. .::: :: :::::: ::: :::::::.:.. .: : : : : CCDS44 MEAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRACIQLSWEKARGKKGRRKRKGSF 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE4 PCPECRHPSAPAALRPNWALARLTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCL ::::::. : : :: :....: .:.. : :: .: :::.:::. :: :.:. CCDS44 PCPECREMSPQRNLLPNRLLTKVAEMAQQHP-GLQKQDLCQEHHEPLKLFCQKDQSPICV 70 80 90 100 110 110 120 130 140 150 160 pF1KE4 VCRESQEHQTHAMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIK :::::.::. : . : .:: ..:. :: .... : .. .. .:: : .. ..:. :.: CCDS44 VCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSLAEWQGKVK 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE4 SQRMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEV .: :: :: :.. .:::::. .:: :. ::::: ..: :.. :.. ::. :.:.. CCDS44 ERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVACLDRQGHSLELLLLQL 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE4 GEKSQAPTLELLQNPKEVLTRSEIQDVNYSLEA--VKVKTVCQIPLMKEMLKRFQVAVNL :.: :..::. :: :.:.. .:. : .. .:::..: . :.:. : CCDS44 EERSTQGPLQMLQDMKEPLSRKNNVSVQCPEVAPPTRPRTVCRVPGQIEVLRGFLGKWAP 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE4 AEDTAHPKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFVERFQHLPCVLG CCDS44 RARTSDPGSLGDAPLYPLASEATNGGGSTSALPGDGHWLFTVPS 300 310 320 330 340 >>CCDS1636.1 TRIM58 gene_id:25893|Hs108|chr1 (486 aa) initn: 1054 init1: 354 opt: 741 Z-score: 548.3 bits: 110.8 E(32554): 3.2e-24 Smith-Waterman score: 1039; 35.8% identity (66.5% similar) in 477 aa overlap (4-471:8-462) 10 20 30 40 50 pF1KE4 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCL----HRNWAPGGGPFPCPEC : ..:. ::.:::..:.:::..:::.:: :. ... . :: . ::.: CCDS16 MAWAPPGERLREDARCPVCLDFLQEPVSVDCGHSFCLRCISEFCEKSDGAQGGVYACPQC 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 RHPSAPAALRPNWALARLTEKTQRRRLGPVPPGL--CGRHWEPLRLFCEDDQRPVCLVCR : : :...::: :: :.:...: :: . :: :.:: : : :::.:. .: :: CCDS16 RGPFRPSGFRPNRQLAGLVESVRRLGLG-AGPGARRCARHGEDLSRFCEEDEAALCWVCD 70 80 90 100 110 120 130 140 150 160 pF1KE4 ESQEHQTHAMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEV-KNATQWKDKIKSQ . ::.:: ::..:: ::. :: . . . ... .. :...: :... ::.:.. : CCDS16 AGPEHRTHRTAPLQEAAGSYQVKLQMALELMRKELEDAL-TQEANVGKKTVIWKEKVEMQ 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE4 RMRISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEVGE :.:. :: : ..::..::. :.::. ::. : ..: :. .: : .::.: :. : CCDS16 RQRFRLEFEKHRGFLAQEEQRQLRRLEAEERATLQRLRESKSRLVQQSKALKELADELQE 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE4 KSQAPTLELLQNPKEVLTRSE-IQDVNYSLEAVKVKTVCQIPLMKEMLKRFQVAVNLAED . : :.: ::.. . ::.::. . .. ...::.: :: .:.:..::: :.: CCDS16 RCQRPALGLLEGVRGVLSRSKAVTRLEAENIPMELKTACCIPGRRELLRKFQVDVKLDPA 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE4 TAHPKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWRN-PQKTAFVERFQHLPCVLGKN ::::.:... . : :.. : ::. :.. :::. ::.:: . CCDS16 TAHPSLLLTADLRSVQDGE-----P-----------WRDVPNNP---ERFDTWPCILGLQ 300 310 320 330 350 360 370 380 390 400 pF1KE4 VFTSGKHYWEVESRDSLEVAVGVCREDVMGITDRSKMSPDVGIWAIYWSAAGYWPLIGFP :.::.::::: .. : ..::: .:.. .. ::. :.::.. .. . ... : CCDS16 SFSSGRHYWEVLVGEGAEWGLGVC-QDTLPRKGETTPSPENGVWALWLLKGNEYMVLASP 340 350 360 370 380 390 410 420 430 440 450 460 pF1KE4 GTPTQQEPALHRVGVYLDRGTGNVSFYSAVDGVHLHTFSCSSVSRLRPFFWLSPLASLVI ..: : . . .:..:: .:..:::...:: ...::. . :::.:.. . :.. CCDS16 SVPLLQLESPRCIGIFLDYEAGEISFYNVTDGSYIYTFNQLFSGLLRPYFFICDATPLIL 400 410 420 430 440 450 470 pF1KE4 PPVTDRK ::.: CCDS16 PPTTIAGSGNWASRDHLDPASDVRDDHL 460 470 480 >>CCDS44525.1 TRIM21 gene_id:6737|Hs108|chr11 (475 aa) initn: 877 init1: 382 opt: 723 Z-score: 535.5 bits: 108.5 E(32554): 1.7e-23 Smith-Waterman score: 938; 38.1% identity (62.8% similar) in 465 aa overlap (6-461:10-448) 10 20 30 40 50 pF1KE4 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWAPGGGPFPCPECRHPS . ::.::::::: : .::::::::.::. :. . . ::: :: ::. CCDS44 MASAARLTMMWEEVTCPICLDPFVEPVSIECGHSFCQECISQV-GKGGGSV-CPVCRQRF 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 APAALRPNWALAR----LTEKTQRRRLGPVPPGLCGRHWEPLRLFCEDDQRPVCLVCRES :::: :: : : .:. : : . :. : : :.:::: : . .: :: .: CCDS44 LLKNLRPNRQLANMVNNLKEISQEAREG-TQGERCAVHGERLHLFCEKDGKALCWVCAQS 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 QEHQTHAMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQ-DVEVKNATQWKDKIKSQRM ..:. :::.:..:: . :.::: . .: :.. . .:. .. .: : .:: ...:. CCDS44 RKHRDHAMVPLEEAAQEYQEKLQVALGELRRKQELAEKLEVEIAIKRA-DWKKTVETQKS 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 RISTEFSKLHNFLVEEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEVGEKS :: .:: . .:::::::. ::.:.:.:.: . :.:. :: : .:..:: :. .. CCDS44 RIHAEFVQQKNFLVEEEQRQLQELEKDEREQLRILGEKEAKLAQQSQALQELISELDRRC 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE4 QAPTLELLQNPKEVLTRSEIQDV-NYSLEAVKVKTVCQIPLMKEMLKRFQVAVNLAEDTA .. .:::::. :: ::: .. . .. . ....::..: .:.::. : ..: ::: CCDS44 HSSALELLQEVIIVLERSESWNLKDLDITSPELRSVCHVPGLKKMLRTCAVHITLDPDTA 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE4 HPKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFVERFQHLPCVLGKNVFT .: :..:.. : :. . .: : : . :::. : ::: . : CCDS44 NPWLILSEDRRQVRLGDTQQSIP----------GNE--------ERFDSYPMVLGAQHFH 300 310 320 330 360 370 380 390 400 pF1KE4 SGKHYWEVESRDSLEVAVGVCREDVMGITDRSKMSPDVGIWAIY-WSAAGYWPLIGFPGT ::::::::. . .::::..: . .: :.:.:. :. : .: : CCDS44 SGKHYWEVDVTGKEAWDLGVCRDSVRR-KGHFLLSSKSGFWTIWLWNKQKYEAGT-YPQT 340 350 360 370 380 390 410 420 430 440 450 460 pF1KE4 PTQQEPALHRVGVYLDRGTGNVSFYSAVD-GVHLHTFS-CSSVSRLRPFFWLSPLASLVI : . . .::..:: .: ::::. .: : ...:: :. .. ::::: :: CCDS44 PLHLQVPPCQVGIFLDYEAGMVSFYNITDHGSLIYSFSECAFTGPLRPFF--SPGFNDGG 400 410 420 430 440 450 470 pF1KE4 PPVTDRK CCDS44 KNTAPLTLCPLNIGSQGSTDY 460 470 >>CCDS31356.1 TRIM68 gene_id:55128|Hs108|chr11 (485 aa) initn: 765 init1: 211 opt: 693 Z-score: 513.9 bits: 104.5 E(32554): 2.6e-22 Smith-Waterman score: 859; 32.3% identity (60.6% similar) in 492 aa overlap (4-465:8-468) 10 20 30 40 50 pF1KE4 MEAEDIQEELTCPICLDYFQDPVSIECGHNFCRGCLHRNWA-PGGGP---FPCPEC : : ::..::::. ....:.::.:::.::..:: : :: . . :: : CCDS31 MDPTALVEAIVEEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIPGESQNWGYTCPLC 10 20 30 40 50 60 60 70 80 90 100 pF1KE4 RHPSAPAALRPNWALARLTEKTQRRRLGP---VPPGLCGRHWEPLRLFCEDDQRPVCLVC : : : ::::: :: ..::.. :: : . :: :: : :..::..: .: .: CCDS31 RAPVQPRNLRPNWQLANVVEKVRLLRLHPGMGLKGDLCERHGEKLKMFCKEDVLIMCEAC 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE4 RESQEHQTHAMAPIDEAFESYREKLLKSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKSQ .: ::..:...:.... :. .: .. ..: ..... .:. : : .. :: ..... CCDS31 SQSPEHEAHSVVPMEDVAWEYKWELHEALEHLKKEQEEAWKLEVGERKRTATWKIQVETR 130 140 150 160 170 180 170 180 190 200 210 pF1KE4 RMRISTEFSKLHNFLVEEEDLFLQ----------RLNKEEEETKKKLNENTLKLNQTIAS .. : :: : . .: ... : :..: :: .::. : .: : CCDS31 KQSIVWEFEKYQRLLEKKQPPHRQLGAEVAAALASLQREAAETMQKLELNHSELIQQSQV 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE4 LKKLILEVGEKSQAPTLELLQNPKEVLTRSEIQDVNYSLE-AVKVKTVCQIPLMKEMLKR : ..: :. :.:: :. .::. .:::.::. ... ....:: :.. ..:.:: CCDS31 LWRMIAELKERSQRPVRWMLQDIQEVLNRSKSWSLQQPEPISLELKTDCRVLGLREILKT 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE4 FQVAVNLAEDTAHPKLVFSQEGRYVKNTASASSWPVFSSAWNYFAGWRNPQKTAFVERFQ . . : : :::. .:. :.. . :. . .. : :: ::: CCDS31 YAADVRLDPDTAYSRLIVSEDRKRVHYGDTNQKLP------------DNP------ERFY 310 320 330 340 340 350 360 370 380 390 pF1KE4 HLPCVLGKNVFTSGKHYWEVESRDSLEVAVGVCREDVMGITDRSK---MSPDVGIWAI-- . :::.. ..::.:::::: : : ..:::...: ::.. .:: :.:.: CCDS31 RYNIVLGSQCISSGRHYWEVEVGDRSEWGLGVCKQNV----DRKEVVYLSPHYGFWVIRL 350 360 370 380 390 400 410 420 430 440 pF1KE4 -----YWSAAGYWPLIGFPGTPTQQEPALHRVGVYLDRGTGNVSFYSAVD-GVHLHTFSC : ... .:....: : .:::...: . ..:::...: : :. :: CCDS31 RKGNEYRAGTDEYPILSLPVPP-------RRVGIFVDYEAHDISFYNVTDCGSHIFTFPR 400 410 420 430 440 450 450 460 470 pF1KE4 SSV-SRLRPFFWLSPLASLVIPPVTDRK .:: :.: :: :. CCDS31 YPFPGRLLPYF--SPCYSIGTNNTAPLAICSLDGED 460 470 480 474 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 16:13:44 2016 done: Mon Nov 7 16:13:45 2016 Total Scan time: 3.380 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]