FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6260, 727 aa 1>>>pF1KB6260 727 - 727 aa - 727 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.5085+/-0.00113; mu= -1.6963+/- 0.068 mean_var=402.7049+/-81.223, 0's: 0 Z-trim(113.5): 42 B-trim: 0 in 0/53 Lambda= 0.063912 statistics sampled from 14135 (14166) to 14135 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.435), width: 16 Scan time: 4.620 The best scores are: opt bits E(32554) CCDS42346.1 UBTF gene_id:7343|Hs108|chr17 ( 727) 4860 462.9 7.6e-130 CCDS11480.1 UBTF gene_id:7343|Hs108|chr17 ( 764) 3397 328.1 3.2e-89 CCDS44704.1 UBTFL1 gene_id:642623|Hs108|chr11 ( 393) 807 88.9 1.6e-17 >>CCDS42346.1 UBTF gene_id:7343|Hs108|chr17 (727 aa) initn: 4860 init1: 4860 opt: 4860 Z-score: 2444.7 bits: 462.9 E(32554): 7.6e-130 Smith-Waterman score: 4860; 100.0% identity (100.0% similar) in 727 aa overlap (1-727:1-727) 10 20 30 40 50 60 pF1KB6 MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDEIMRDYIQKHPELNISEEGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDEIMRDYIQKHPELNISEEGI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 TKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 TKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQ 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 KEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 KEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB6 EGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 EGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB6 AREAALKAQSERKPGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 AREAALKAQSERKPGGEREERGKLPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEM 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB6 TWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 TWNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQK 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB6 FSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 FSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSL 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB6 SPQDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 SPQDRAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDD 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB6 ENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 ENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGD 670 680 690 700 710 720 pF1KB6 SSDSDSN ::::::: CCDS42 SSDSDSN >>CCDS11480.1 UBTF gene_id:7343|Hs108|chr17 (764 aa) initn: 3349 init1: 3349 opt: 3397 Z-score: 1715.4 bits: 328.1 E(32554): 3.2e-89 Smith-Waterman score: 4743; 95.1% identity (95.1% similar) in 759 aa overlap (6-727:6-764) 10 20 30 40 50 60 pF1KB6 MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR 130 140 150 160 170 180 190 200 210 220 pF1KB6 EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPD-------------------- :::::::::::::::::::::::::::::::::::::::: CCDS11 EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDATTKEVKDSLGKQWSQLSDK 190 200 210 220 230 240 230 240 250 260 pF1KB6 -----------------EIMRDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKP ::::::::::::::::::::::::::::::::::::::::::: CCDS11 KRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKP 250 260 270 280 290 300 270 280 290 300 310 320 pF1KB6 PPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 PPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLR 310 320 330 340 350 360 330 340 350 360 370 380 pF1KB6 FLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKGGSEKPKRPVSAMFIFSEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 FLESLPEEEQQRVLGEEKMLNINKKQATSPASKKPAQEGGKGGSEKPKRPVSAMFIFSEE 370 380 390 400 410 420 390 400 410 420 430 440 pF1KB6 KRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKPGGEREERGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKPGGEREERGK 430 440 450 460 470 480 450 460 470 480 490 500 pF1KB6 LPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKR 490 500 510 520 530 540 510 520 530 540 550 560 pF1KB6 YERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 YERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEI 550 560 570 580 590 600 570 580 590 600 610 620 pF1KB6 GSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMTKLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 GSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSMTKLR 610 620 630 640 650 660 630 640 650 660 670 680 pF1KB6 GPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 GPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESED 670 680 690 700 710 720 690 700 710 720 pF1KB6 GDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN :::::::::::::::::::::::::::::::::::::::::::: CCDS11 GDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 730 740 750 760 >>CCDS44704.1 UBTFL1 gene_id:642623|Hs108|chr11 (393 aa) initn: 1447 init1: 807 opt: 807 Z-score: 428.2 bits: 88.9 E(32554): 1.6e-17 Smith-Waterman score: 935; 41.4% identity (68.4% similar) in 408 aa overlap (13-398:1-380) 10 20 30 40 50 60 pF1KB6 MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF :: :..: .::..:.: :::::.:: ::.:.: :..:.::::: :::: CCDS44 MALPRSQGHWSNKDILRLLECMENNRPSDDNSTFSSTQSHMDWGKVAF 10 20 30 40 70 80 90 100 110 120 pF1KB6 KDFSGDMCKLKWVEISNEVRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF :.:::.::.:::.::: ..::: :: ::.:.:.. ::. :..: .. :::::.::: : CCDS44 KNFSGEMCRLKWLEISCNLRKFGTLKELVLEAKKCVKKMNKSQKYRNGPDFPKRPLTAYN 50 60 70 80 90 100 130 140 150 160 170 180 pF1KB6 RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR ::: :. .:....: : . .:::::::::.::::. :.::::::..::::::..::::: CCDS44 RFFKESWPQYSQMYPGMRSQELTKILSKKYRELPEQMKQKYIQDFRKEKQEFEEKLARFR 110 120 130 140 150 160 190 200 210 220 230 240 pF1KB6 EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDEIMRDYIQKHPELNISEEGI :.::::.:.::::.. .. :..: .::. . :: : CCDS44 EEHPDLVQKAKKSSVSKR---------TQNK---------------VQKKFQKNIEEV-- 170 180 190 200 250 260 270 280 290 pF1KB6 TKSTLTKAERQLKD-KFDGRPTKPPPNSYSLYCAELMAN--MKDVPSTERMVLCSQQWKL .: :..: .: :: :.: ::: :.: . . .. :. . :::: ...:. CCDS44 --RSLPKTDRFFKKVKFHGEPQKPPMNGYHKFHQDSWSSKEMQHLSVRERMVEIGRRWQR 210 220 230 240 250 260 300 310 320 330 340 pF1KB6 LSQKEKDAYHKKCDQKKKDYEVELLRFLESL-PE-----EEQQRVLGEEKMLNINK---- . :..:: .... .. .:.:.:.: .:..: :: .:. . :.. .. . CCDS44 IPQSQKDHFKSQAEELQKQYKVKLDLWLKTLSPENYAAYKESTYAKGKNMAMTGGPDPRL 270 280 290 300 310 320 350 360 370 380 390 pF1KB6 KQATSPASK-KPAQEG---GKG----GSEKPKRP-VSAMFIFSEEKRRQLQEERPELSES ::: .:. : ::: :.: :... . :. . :. :. ..:. : :.: CCDS44 KQADPQSSSAKGLQEGFGEGQGLQAAGTDSSQTIWVNCHVSMEPEENRKKDREKEESSNS 330 340 350 360 370 380 400 410 420 430 440 450 pF1KB6 ELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKPGGEREERGKLPESPKRAEEIWQQS CCDS44 SDCSSGEEIEVDV 390 727 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 16:07:48 2016 done: Mon Nov 7 16:07:48 2016 Total Scan time: 4.620 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]