FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2182, 181 aa 1>>>pF1KE2182 181 - 181 aa - 181 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.0591+/-0.00085; mu= 2.7553+/- 0.052 mean_var=208.0953+/-41.638, 0's: 0 Z-trim(114.4): 8 B-trim: 119 in 1/52 Lambda= 0.088908 statistics sampled from 14978 (14983) to 14978 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.769), E-opt: 0.2 (0.46), width: 16 Scan time: 2.270 The best scores are: opt bits E(32554) CCDS5662.1 PDAP1 gene_id:11333|Hs108|chr7 ( 181) 1160 160.0 7.2e-40 >>CCDS5662.1 PDAP1 gene_id:11333|Hs108|chr7 (181 aa) initn: 1160 init1: 1160 opt: 1160 Z-score: 829.2 bits: 160.0 E(32554): 7.2e-40 Smith-Waterman score: 1160; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181) 10 20 30 40 50 60 pF1KE2 MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MPKGGRKGGHKGRARQYTSPEEIDAQLQAEKQKAREEEEQKEGGDGAAGDPKKEKKSLDS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRREREEIEKQKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 DESEDEEDDYQQKRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELSRREREEIEKQKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEEERKAKDDATLSGKRMQSLSLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 KERYMKMHLAGKTEQAKADLARLAIIRKQREEAARKKEEERKAKDDATLSGKRMQSLSLN 130 140 150 160 170 180 pF1KE2 K : CCDS56 K 181 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:56:10 2016 done: Mon Nov 7 15:56:10 2016 Total Scan time: 2.270 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]