FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2125, 328 aa 1>>>pF1KE2125 328 - 328 aa - 328 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.5711+/-0.000363; mu= 6.5451+/- 0.023 mean_var=162.1486+/-32.231, 0's: 0 Z-trim(118.5): 20 B-trim: 42 in 1/56 Lambda= 0.100720 statistics sampled from 31473 (31490) to 31473 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.728), E-opt: 0.2 (0.369), width: 16 Scan time: 8.560 The best scores are: opt bits E(85289) NP_060354 (OMIM: 606505) PIN2/TERF1-interacting te ( 328) 2174 327.6 2.3e-89 NP_001271285 (OMIM: 606505) PIN2/TERF1-interacting ( 174) 906 143.1 4.1e-34 >>NP_060354 (OMIM: 606505) PIN2/TERF1-interacting telome (328 aa) initn: 2174 init1: 2174 opt: 2174 Z-score: 1725.5 bits: 327.6 E(85289): 2.3e-89 Smith-Waterman score: 2174; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328) 10 20 30 40 50 60 pF1KE2 MSMLAERRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MSMLAERRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 KNNHLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTDSSDKKEKKSFSLEEKSKIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 KNNHLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTDSSDKKEKKSFSLEEKSKIS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KNRVHYMKFTKGKDLSSRSKTDLDCIFGKRQSKKTPEGDASPSTPEENETTTTSAFTIQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 KNRVHYMKFTKGKDLSSRSKTDLDCIFGKRQSKKTPEGDASPSTPEENETTTTSAFTIQE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 YFAKRMAALKNKPQVPVPGSDISETQVERKRGKKRNKEATGKDVESYLQPKAKRHTEGKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 YFAKRMAALKNKPQVPVPGSDISETQVERKRGKKRNKEATGKDVESYLQPKAKRHTEGKP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ERAEAQERVAKKKSAPAEEQLRGPCWDQSSKASAQDAGDHVQPPEGRDFTLKPKKRRGKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 ERAEAQERVAKKKSAPAEEQLRGPCWDQSSKASAQDAGDHVQPPEGRDFTLKPKKRRGKK 250 260 270 280 290 300 310 320 pF1KE2 KLQKPVEIAEDATLEETLVKKKKKKDSK :::::::::::::::::::::::::::: NP_060 KLQKPVEIAEDATLEETLVKKKKKKDSK 310 320 >>NP_001271285 (OMIM: 606505) PIN2/TERF1-interacting tel (174 aa) initn: 897 init1: 897 opt: 906 Z-score: 733.4 bits: 143.1 E(85289): 4.1e-34 Smith-Waterman score: 906; 93.2% identity (96.6% similar) in 146 aa overlap (1-144:1-146) 10 20 30 40 50 60 pF1KE2 MSMLAERRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSMLAERRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 KNNHLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTDSSDKKEKKSFSLEEKSKIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KNNHLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTDSSDKKEKKSFSLEEKSKIS 70 80 90 100 110 120 130 140 150 160 170 pF1KE2 KNRVHYMKFTKGK--DLSSRSKTDLDCIFGKRQSKKTPEGDASPSTPEENETTTTSAFTI ::::::::::::. .: ::.. . : NP_001 KNRVHYMKFTKGRCQSLHSRGERNHDNQRLHHPGVLCQADGSTEEQAPGSSSRV 130 140 150 160 170 328 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:46:57 2016 done: Mon Nov 7 15:46:58 2016 Total Scan time: 8.560 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]