FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2203, 875 aa 1>>>pF1KE2203 875 - 875 aa - 875 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.9825+/-0.000548; mu= -5.7123+/- 0.034 mean_var=315.5197+/-64.065, 0's: 0 Z-trim(116.5): 122 B-trim: 470 in 1/53 Lambda= 0.072204 statistics sampled from 27565 (27694) to 27565 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.648), E-opt: 0.2 (0.325), width: 16 Scan time: 11.580 The best scores are: opt bits E(85289) NP_004389 (OMIM: 601235) probable ATP-dependent RN ( 875) 5688 607.4 9.6e-173 NP_006764 (OMIM: 606355) ATP-dependent RNA helicas ( 670) 1277 147.8 1.6e-34 NP_057439 (OMIM: 615428) probable ATP-dependent RN ( 455) 774 95.3 7.1e-19 NP_060365 (OMIM: 616621) probable ATP-dependent RN ( 796) 745 92.4 8.9e-18 NP_004388 (OMIM: 600326) probable ATP-dependent RN ( 483) 667 84.1 1.7e-15 NP_001244120 (OMIM: 600326) probable ATP-dependent ( 483) 667 84.1 1.7e-15 XP_005271474 (OMIM: 600326) PREDICTED: probable AT ( 483) 667 84.1 1.7e-15 NP_076977 (OMIM: 611665) ATP-dependent RNA helicas ( 881) 642 81.7 1.6e-14 NP_001104792 (OMIM: 611665) ATP-dependent RNA heli ( 882) 642 81.7 1.6e-14 NP_001308759 (OMIM: 608170,616871) probable ATP-de ( 496) 632 80.5 2.1e-14 NP_001308661 (OMIM: 608170,616871) probable ATP-de ( 496) 632 80.5 2.1e-14 XP_016879601 (OMIM: 613369) PREDICTED: ATP-depende ( 775) 636 81.1 2.3e-14 NP_057306 (OMIM: 608170,616871) probable ATP-depen ( 622) 632 80.6 2.6e-14 NP_987095 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 636 81.1 2.7e-14 NP_031398 (OMIM: 613369) ATP-dependent RNA helicas ( 938) 636 81.1 2.7e-14 XP_016879600 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 636 81.1 2.7e-14 XP_006721720 (OMIM: 613369) PREDICTED: ATP-depende ( 938) 636 81.1 2.7e-14 NP_001243839 (OMIM: 606357) nucleolar RNA helicase ( 715) 632 80.6 2.9e-14 NP_004719 (OMIM: 606357) nucleolar RNA helicase 2 ( 783) 632 80.6 3.1e-14 NP_006377 (OMIM: 608469) probable ATP-dependent RN ( 729) 631 80.5 3.1e-14 NP_001091974 (OMIM: 608469) probable ATP-dependent ( 731) 631 80.5 3.1e-14 XP_011534230 (OMIM: 606286) PREDICTED: probable AT ( 529) 619 79.2 5.8e-14 XP_011534229 (OMIM: 606286) PREDICTED: probable AT ( 529) 619 79.2 5.8e-14 XP_011534228 (OMIM: 606286) PREDICTED: probable AT ( 604) 619 79.2 6.4e-14 NP_061135 (OMIM: 606286) probable ATP-dependent RN ( 648) 619 79.2 6.8e-14 XP_011522561 (OMIM: 613369) PREDICTED: ATP-depende ( 674) 618 79.1 7.5e-14 XP_016872117 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 616 78.9 8.7e-14 XP_016872118 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 616 78.9 8.7e-14 XP_011538446 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 616 78.9 8.7e-14 XP_005270205 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 616 78.9 8.7e-14 XP_016872116 (OMIM: 610373) PREDICTED: ATP-depende ( 672) 616 78.9 8.7e-14 NP_076950 (OMIM: 610373) ATP-dependent RNA helicas ( 737) 616 79.0 9.3e-14 XP_016872115 (OMIM: 610373) PREDICTED: ATP-depende ( 737) 616 79.0 9.3e-14 NP_001307526 (OMIM: 180630) probable ATP-dependent ( 614) 612 78.5 1.1e-13 NP_004387 (OMIM: 180630) probable ATP-dependent RN ( 614) 612 78.5 1.1e-13 NP_001307524 (OMIM: 180630) probable ATP-dependent ( 614) 612 78.5 1.1e-13 NP_001307525 (OMIM: 180630) probable ATP-dependent ( 614) 612 78.5 1.1e-13 XP_016866492 (OMIM: 606286) PREDICTED: probable AT ( 439) 602 77.4 1.7e-13 NP_001160006 (OMIM: 605281) probable ATP-dependent ( 575) 596 76.8 3.2e-13 XP_011541799 (OMIM: 605281) PREDICTED: probable AT ( 678) 596 76.9 3.7e-13 NP_001136021 (OMIM: 605281) probable ATP-dependent ( 690) 596 76.9 3.8e-13 XP_011541797 (OMIM: 605281) PREDICTED: probable AT ( 698) 596 76.9 3.8e-13 NP_001160005 (OMIM: 605281) probable ATP-dependent ( 704) 596 76.9 3.8e-13 NP_077726 (OMIM: 605281) probable ATP-dependent RN ( 724) 596 76.9 3.9e-13 XP_011508337 (OMIM: 174300,615464) PREDICTED: prob ( 619) 567 73.8 2.8e-12 XP_016857920 (OMIM: 174300,615464) PREDICTED: prob ( 619) 567 73.8 2.8e-12 NP_001026895 (OMIM: 174300,615464) probable ATP-de ( 619) 567 73.8 2.8e-12 XP_016857921 (OMIM: 174300,615464) PREDICTED: prob ( 619) 567 73.8 2.8e-12 NP_001407 (OMIM: 602641) eukaryotic initiation fac ( 406) 552 72.1 5.9e-12 NP_001278405 (OMIM: 612500) probable ATP-dependent ( 491) 551 72.1 7.4e-12 >>NP_004389 (OMIM: 601235) probable ATP-dependent RNA he (875 aa) initn: 5688 init1: 5688 opt: 5688 Z-score: 3222.3 bits: 607.4 E(85289): 9.6e-173 Smith-Waterman score: 5688; 100.0% identity (100.0% similar) in 875 aa overlap (1-875:1-875) 10 20 30 40 50 60 pF1KE2 MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKKKQLRKQLKKPEWQVERESISRLMQNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKKKQLRKQLKKPEWQVERESISRLMQNY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 EKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 EKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 LAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 LAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LKHEAERINNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 LKHEAERINNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 ENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 ISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 ISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 FVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 FVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 PSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 PSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVY 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 LMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFLQKMQKQPTKELVRSQADKVIEPRAPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 LMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFLQKMQKQPTKELVRSQADKVIEPRAPSL 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 TNDEVEEFRAYFNEKMSILQKGGKRLEGTEHRQDNDTGNEEQEEEEDDEEEMEEKLAKAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 TNDEVEEFRAYFNEKMSILQKGGKRLEGTEHRQDNDTGNEEQEEEEDDEEEMEEKLAKAK 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 GSQAPSLPNTSEAQKIKEVPTQFLDRDEEEEDADFLKVKRHNVFGLDLKDEKTLQKKEPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 GSQAPSLPNTSEAQKIKEVPTQFLDRDEEEEDADFLKVKRHNVFGLDLKDEKTLQKKEPS 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 KSSIKKKMTKVAEAKKVMKRNFKVNKKITFTDEGELVQQWPQMQKSAIKDAEEDDDTGGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 KSSIKKKMTKVAEAKKVMKRNFKVNKKITFTDEGELVQQWPQMQKSAIKDAEEDDDTGGI 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE2 NLHKAKERLQEEDKFDKEEYRKKIKAKHREKRLKEREARREANKRQAKAKDEEEAFLDWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 NLHKAKERLQEEDKFDKEEYRKKIKAKHREKRLKEREARREANKRQAKAKDEEEAFLDWS 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE2 DDDDDDDDGFDPSTLPDPDKYRSSEDSDSEDMENKISDTKKKQGMKKRSNSEVEDVGPTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 DDDDDDDDGFDPSTLPDPDKYRSSEDSDSEDMENKISDTKKKQGMKKRSNSEVEDVGPTS 790 800 810 820 830 840 850 860 870 pF1KE2 HNRKKARWDTLEPLDTGLSLAEDEELVLHLLRSQS ::::::::::::::::::::::::::::::::::: NP_004 HNRKKARWDTLEPLDTGLSLAEDEELVLHLLRSQS 850 860 870 >>NP_006764 (OMIM: 606355) ATP-dependent RNA helicase DD (670 aa) initn: 902 init1: 476 opt: 1277 Z-score: 740.7 bits: 147.8 E(85289): 1.6e-34 Smith-Waterman score: 1277; 42.0% identity (74.5% similar) in 505 aa overlap (12-510:121-621) 10 20 30 40 pF1KE2 MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKK-KQLRKQ :.:: .. .. : : ... . :. ... NP_006 TVLTNGEAAMQSSNSESKKKKKKKRKMVNDAEPDTKKAKTENKGKSEEESAETTKETENN 100 110 120 130 140 150 50 60 70 80 90 pF1KE2 LKKPEWQVERESISRLMQNYEKINVNEITRFSDFP--LSKKTLKGLQEAQYRLVTEIQKQ ..::. . .. . : . .. : : :... ....:::...: . .::::.. NP_006 VEKPDNDEDESEVPSLPLGLT--GAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHK 160 170 180 190 200 100 110 120 130 140 150 pF1KE2 TIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTF .: :.:.:.:.:::::::::::::.:..: . .:.. .: ::::.:::::::.::: NP_006 SIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTF 210 220 230 240 250 260 160 170 180 190 200 210 pF1KE2 EVLRKVGKNHDFSAGLIIGGKDLKHEAERINN-INILVCTPGRLLQHMDETVSFHATDLQ ::... .: . :::.::.. . ::....: :::.: ::::::.::..: .: .:: NP_006 GVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQ 270 280 290 300 310 320 220 230 240 250 260 270 pF1KE2 MLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKN-PEYVWV ::.::::::::.:: . .. .:. :: .:::.:::::::..:.::::.:::. : :: : NP_006 CLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGV 330 340 350 360 370 380 280 290 300 310 320 330 pF1KE2 HEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRL . .: :::.:.:: .... .:..::... ::: .:::::: :.: :... . NP_006 DDDKANATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYI 390 400 410 420 430 440 340 350 360 370 380 390 pF1KE2 RPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDA . .::.::.:.: .: .. .: ...:. ::.::::::.: :.:..:.: :.: NP_006 --DLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDP 450 460 470 480 490 500 400 410 420 430 440 450 pF1KE2 NTYIHRAGRTAR-YKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLE . ::::.::::: . :.::::: : : .... : :.:::..:. .. :. :.:..:: NP_006 KEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLSEFDFSWSKISDIQSQLE 510 520 530 540 550 560 460 470 480 490 500 510 pF1KE2 SILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFLQK ... .. :.. ::. . ::.:. . :..:.:..: .:. :::.:. : : : NP_006 KLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVN 570 580 590 600 610 620 520 530 540 550 560 570 pF1KE2 MQKQPTKELVRSQADKVIEPRAPSLTNDEVEEFRAYFNEKMSILQKGGKRLEGTEHRQDN NP_006 SNEGKQKKRGGGGGFGYQKTKKVEKSKIFKHISKKSSDSRQFSH 630 640 650 660 670 >>NP_057439 (OMIM: 615428) probable ATP-dependent RNA he (455 aa) initn: 715 init1: 264 opt: 774 Z-score: 459.9 bits: 95.3 E(85289): 7.1e-19 Smith-Waterman score: 774; 34.1% identity (66.1% similar) in 416 aa overlap (63-469:18-425) 40 50 60 70 80 90 pF1KE2 KKKQLRKQLKKPEWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLV .. .: :.:. .. .. .. . NP_057 MAAPEEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKP 10 20 30 40 100 110 120 130 140 150 pF1KE2 TEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRE :.:: ..: :::::.:..: :.:::::: :: .:.:.:: . . . : .:...:::: NP_057 TKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLE----TPQRLFALVLTPTRE 50 60 70 80 90 100 160 170 180 190 200 210 pF1KE2 LAYQTFEVLRKVGKNHDFSAGLIIGGKD-LKHEAERINNINILVCTPGRLLQHMDETVSF ::.: : .. .:.. ....:.:: : ... .. .:.. :::::..:...: .: NP_057 LAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGF 110 120 130 140 150 160 220 230 240 250 260 270 pF1KE2 HATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNP . :..::.:::::::.: : .. ... .:. :.:.:::::.::.:. : : .:::: NP_057 NLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNP 170 180 190 200 210 220 280 290 300 310 320 330 pF1KE2 EYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYR : ..::.: :.: :: . : . : .: .. ..: :.:...: NP_057 --VKCAVSSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIFCSTCNNTQRTAL 230 240 250 260 270 280 340 350 360 370 380 390 pF1KE2 VFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFD .. : : . . :::...: .:. :.: : ..:.:::.:.::::.: :. :..:: NP_057 LLRNL--GFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFD 290 300 310 320 330 400 410 420 430 440 pF1KE2 CPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQ---LLQKKVPV-----KEIKIN : .. ::::.::::: ..:.:. .. . . :. :. ::.: :. . NP_057 IPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPGFPTQDDEVMML 340 350 360 370 380 390 450 460 470 480 490 500 pF1KE2 PEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLG :.. ..:. . : . . :.:.. NP_057 TERVAEAQRFARMELREHGEKKKRSREDAGDNDDTEGAIGVRNKVAGGKMKKRKGR 400 410 420 430 440 450 >>NP_060365 (OMIM: 616621) probable ATP-dependent RNA he (796 aa) initn: 592 init1: 382 opt: 745 Z-score: 440.1 bits: 92.4 E(85289): 8.9e-18 Smith-Waterman score: 754; 29.7% identity (59.2% similar) in 622 aa overlap (66-667:215-795) 40 50 60 70 80 90 pF1KE2 QLRKQLKKPEWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEI .: :.:. ::. ::.. .. : : NP_060 KADTLKVKDRKKKKKKGQEAGGFFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPI 190 200 210 220 230 240 100 110 120 130 140 150 pF1KE2 QKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEAL-YRLQWTSTDGLGVLIISPTRELA :: : ..: :::. . : ::.::: :: .:::: : :. . . . ::.. :::::. NP_060 QKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVT--RVLVLVPTRELG 250 260 270 280 290 300 160 170 180 190 200 210 pF1KE2 YQTFEVLRKVGKNHDFSAGLIIGGKDLK-HEAERINNINILVCTPGRLLQHMDETVSFHA :. : :.... .... : .:: :.: .:: .::. :::::..:. . ::: NP_060 IQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHL 310 320 330 340 350 360 220 230 240 250 260 270 pF1KE2 TDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEY .....:.::::::.:: : . :. .:. ..:::.:::::.: ::::: .::::: NP_060 SSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVR 370 380 390 400 410 420 280 290 300 310 320 330 pF1KE2 VWVHEKAKYSTPATLEQNYIVCELQQ---KISVLYSFLRSHLKKKSIVFFSSCKEVQYLY ..:. .. . : :.:..: . .. . ... ..: . . ..: .. :... .. NP_060 IFVNSNTDVA-P-FLRQEFIRIRPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMH 430 440 450 460 470 480 340 350 360 370 380 390 pF1KE2 RVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQF .. . :... ::: .: .:.:. .: .. .: :::.::::::. .:. :..: NP_060 ILLGLM--GLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINF 490 500 510 520 530 400 410 420 430 440 pF1KE2 DCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQK-KVPVKEIKINPEKLID :. . :.::.::::: . :... .. .:. :...... :.::: NP_060 TMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKAAKAPVKA---------- 540 550 560 570 580 450 460 470 480 490 500 pF1KE2 VQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLA-VAP :: :: :: : . . : .:.:. : .: : .. . : . NP_060 ------RILPQDVILKFRDK---------IEKM-EKDVYAVLQLEAEEKEMQQSEAQINT 590 600 610 620 630 510 520 530 540 550 560 pF1KE2 RVRFLQKMQKQPTKELVRSQADKVIEPRAPSLTNDEVEEFRAYFNEKMSILQKGGKRLEG :.:.: .. ..: :: .. : : ..:: . : : :.. NP_060 AKRLLEKGKEAVVQEPERSWF-QTKEERKKEKIAKALQEFDLALRGK-----KKRKKFMK 640 650 660 670 680 570 580 590 600 610 620 pF1KE2 TEHRQDNDTGNEEQEEEEDDEEEMEEKLAKA--KGSQAPSLPNT----SEAQKIKEVPTQ ... . :..:... : . . :.::: ....: ..:. . :.: :. . NP_060 DAKKKGEMTAEERSQFEILKAQMFAERLAKRNRRAKRARAMPEEEPVRGPAKKQKQGKKS 690 700 710 720 730 740 630 640 650 660 670 pF1KE2 FLDRDEEEEDADFLKVKRHNVFGLDLKDEKTL----QKKE---PSKSSIKKKMTKVAEAK .:.. . . :: : : .....: : :.. ::: :.. NP_060 VFDEELTNTSKKALKQYRA---GPSFEERKQLGLPHQRRGGNFKSKSRYKRRK 750 760 770 780 790 680 690 700 710 720 730 pF1KE2 KVMKRNFKVNKKITFTDEGELVQQWPQMQKSAIKDAEEDDDTGGINLHKAKERLQEEDKF >>NP_004388 (OMIM: 600326) probable ATP-dependent RNA he (483 aa) initn: 469 init1: 162 opt: 667 Z-score: 399.3 bits: 84.1 E(85289): 1.7e-15 Smith-Waterman score: 667; 29.7% identity (64.9% similar) in 461 aa overlap (3-450:26-470) 10 20 30 pF1KE2 MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKKKQL : ...::.:. ...:. :. .. .. ..: NP_004 MSTARTENPVIMGLSSQNGQLRGPVKPTGGPGGGGTQTQ-QQMNQLKNTNTINNGTQQQA 10 20 30 40 50 40 50 60 70 80 pF1KE2 RKQLK--KP--EWQVERESISRLMQNYEKINVNEIT-----RFSDFPLSKKTLKGLQEAQ ... :: .:. . .: . .:.....: .: :. :... : :. : NP_004 QSMTTTIKPGDDWK----KTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMG 60 70 80 90 100 110 90 100 110 120 130 140 pF1KE2 YRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIIS .. . ::...: .::.:.:.:. ::.:.::. :.:.:.:: ::. . :.. ...: NP_004 WEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE---RLD-LKKDNIQAMVIV 120 130 140 150 160 170 150 160 170 180 190 200 pF1KE2 PTRELAYQTFEVLRKVGKNHDFSAGLII--GGKDLKHEAERINN-INILVCTPGRLLQHM :::::: :. .. .:.: : .: .. :: .:. . :... ..... ::::.:. . NP_004 PTRELALQVSQICIQVSK-HMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLI 180 190 200 210 220 230 210 220 230 240 250 260 pF1KE2 DETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLAR . :. .. .::.::::::..:.. :.. :. .: .:::.:: ::.::: ::. . NP_004 KKGVA-KVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMN 240 250 260 270 280 270 280 290 300 310 320 pF1KE2 LSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKE :..: . . :. : . : : .::. : ... ..::.: .: .. NP_004 SHLQKPYEINLMEEL---TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQR 290 300 310 320 330 340 330 340 350 360 370 380 pF1KE2 VQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVN :. : . . .: : : . .:....: .: .:...: : ::. .::.:. ::: NP_004 VELLAKKISQL--GYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVN 350 360 370 380 390 400 390 400 410 420 430 440 pF1KE2 WVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQK-KVPVKEIKINP :..:: :. :.::.:: ::..:. . : :. .. ... .... .. . .: : : NP_004 VVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI 410 420 430 440 450 460 450 460 470 480 490 500 pF1KE2 EKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGL .: . : NP_004 DKSLYVAEYHSEPVEDEKP 470 480 >>NP_001244120 (OMIM: 600326) probable ATP-dependent RNA (483 aa) initn: 469 init1: 162 opt: 667 Z-score: 399.3 bits: 84.1 E(85289): 1.7e-15 Smith-Waterman score: 667; 29.7% identity (64.9% similar) in 461 aa overlap (3-450:26-470) 10 20 30 pF1KE2 MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKKKQL : ...::.:. ...:. :. .. .. ..: NP_001 MSTARTENPVIMGLSSQNGQLRGPVKPTGGPGGGGTQTQ-QQMNQLKNTNTINNGTQQQA 10 20 30 40 50 40 50 60 70 80 pF1KE2 RKQLK--KP--EWQVERESISRLMQNYEKINVNEIT-----RFSDFPLSKKTLKGLQEAQ ... :: .:. . .: . .:.....: .: :. :... : :. : NP_001 QSMTTTIKPGDDWK----KTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMG 60 70 80 90 100 110 90 100 110 120 130 140 pF1KE2 YRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIIS .. . ::...: .::.:.:.:. ::.:.::. :.:.:.:: ::. . :.. ...: NP_001 WEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE---RLD-LKKDNIQAMVIV 120 130 140 150 160 170 150 160 170 180 190 200 pF1KE2 PTRELAYQTFEVLRKVGKNHDFSAGLII--GGKDLKHEAERINN-INILVCTPGRLLQHM :::::: :. .. .:.: : .: .. :: .:. . :... ..... ::::.:. . NP_001 PTRELALQVSQICIQVSK-HMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLI 180 190 200 210 220 230 210 220 230 240 250 260 pF1KE2 DETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLAR . :. .. .::.::::::..:.. :.. :. .: .:::.:: ::.::: ::. . NP_001 KKGVA-KVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMN 240 250 260 270 280 270 280 290 300 310 320 pF1KE2 LSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKE :..: . . :. : . : : .::. : ... ..::.: .: .. NP_001 SHLQKPYEINLMEEL---TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQR 290 300 310 320 330 340 330 340 350 360 370 380 pF1KE2 VQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVN :. : . . .: : : . .:....: .: .:...: : ::. .::.:. ::: NP_001 VELLAKKISQL--GYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVN 350 360 370 380 390 400 390 400 410 420 430 440 pF1KE2 WVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQK-KVPVKEIKINP :..:: :. :.::.:: ::..:. . : :. .. ... .... .. . .: : : NP_001 VVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI 410 420 430 440 450 460 450 460 470 480 490 500 pF1KE2 EKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGL .: . : NP_001 DKSLYVAEYHSEPVEDEKP 470 480 >>XP_005271474 (OMIM: 600326) PREDICTED: probable ATP-de (483 aa) initn: 469 init1: 162 opt: 667 Z-score: 399.3 bits: 84.1 E(85289): 1.7e-15 Smith-Waterman score: 667; 29.7% identity (64.9% similar) in 461 aa overlap (3-450:26-470) 10 20 30 pF1KE2 MGKTANSPGSGARPDPVRSFNRWKKKHSHRQNKKKQL : ...::.:. ...:. :. .. .. ..: XP_005 MSTARTENPVIMGLSSQNGQLRGPVKPTGGPGGGGTQTQ-QQMNQLKNTNTINNGTQQQA 10 20 30 40 50 40 50 60 70 80 pF1KE2 RKQLK--KP--EWQVERESISRLMQNYEKINVNEIT-----RFSDFPLSKKTLKGLQEAQ ... :: .:. . .: . .:.....: .: :. :... : :. : XP_005 QSMTTTIKPGDDWK----KTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMG 60 70 80 90 100 110 90 100 110 120 130 140 pF1KE2 YRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIIS .. . ::...: .::.:.:.:. ::.:.::. :.:.:.:: ::. . :.. ...: XP_005 WEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE---RLD-LKKDNIQAMVIV 120 130 140 150 160 170 150 160 170 180 190 200 pF1KE2 PTRELAYQTFEVLRKVGKNHDFSAGLII--GGKDLKHEAERINN-INILVCTPGRLLQHM :::::: :. .. .:.: : .: .. :: .:. . :... ..... ::::.:. . XP_005 PTRELALQVSQICIQVSK-HMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLI 180 190 200 210 220 230 210 220 230 240 250 260 pF1KE2 DETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLAR . :. .. .::.::::::..:.. :.. :. .: .:::.:: ::.::: ::. . XP_005 KKGVA-KVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMN 240 250 260 270 280 270 280 290 300 310 320 pF1KE2 LSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKE :..: . . :. : . : : .::. : ... ..::.: .: .. XP_005 SHLQKPYEINLMEEL---TLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQR 290 300 310 320 330 340 330 340 350 360 370 380 pF1KE2 VQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVN :. : . . .: : : . .:....: .: .:...: : ::. .::.:. ::: XP_005 VELLAKKISQL--GYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVN 350 360 370 380 390 400 390 400 410 420 430 440 pF1KE2 WVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQK-KVPVKEIKINP :..:: :. :.::.:: ::..:. . : :. .. ... .... .. . .: : : XP_005 VVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNI 410 420 430 440 450 460 450 460 470 480 490 500 pF1KE2 EKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGL .: . : XP_005 DKSLYVAEYHSEPVEDEKP 470 480 >>NP_076977 (OMIM: 611665) ATP-dependent RNA helicase DD (881 aa) initn: 586 init1: 267 opt: 642 Z-score: 381.5 bits: 81.7 E(85289): 1.6e-14 Smith-Waterman score: 716; 27.2% identity (59.6% similar) in 718 aa overlap (71-728:98-795) 50 60 70 80 90 100 pF1KE2 LKKPEWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTI :... :: ..::... :.. : ::..:: NP_076 FPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTI 70 80 90 100 110 120 110 120 130 140 150 pF1KE2 GLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTD-GLGVLIISPTRELAYQTFE . :.::::.. :.:::::: ::.:..: ::. :.. : .::.::::::: ::.. NP_076 PVILDGKDVVAMARTGSGKTACFLLPMFE---RLKTHSAQTGARALILSPTRELALQTLK 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE2 VLRKVGKNHDFSAGLIIGGKDLKHEAERIN-NINILVCTPGRLLQHMDETVSFHATDLQM ...:: ....::.:: .. . .. : .:.. :::::. :. .:.. .... NP_076 FTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLV-HVAVEMSLKLQSVEY 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE2 LVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHE .:.:::::...::::. .. .: :: .::.::::: : . ..:: .: .: . . NP_076 VVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDV 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE2 KAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKK--SIVFFSSCKEVQYLYRVFCRL .: . :. .... . . : .:: .:.. .. . ..:: .. ....:: ... NP_076 DTKLNEQ--LKTSFFLVREDTKAAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQ 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE2 RPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDA : :: ... . : .:. . ..:..::.::::::.: .. :.... : . NP_076 R--VSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKG 370 380 390 400 410 400 410 420 430 440 pF1KE2 NTYIHRAGRTARYKEDGEALLILLPSEKAMVQQL---LQKKV----PVKEIK----IN-- . ..::.::.:: ..: : .. :.: .. .: : ... :.:: . .. NP_076 KLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGRSLTLARPLKEPSGVAGVDGM 420 430 440 450 460 470 450 460 470 480 490 pF1KE2 ----PEKLIDVQKK-LESILAQDQDLK---ERAQRCFVSYVRSVYLMKDKEVFDVSKLPI :....: . . :.: : . .:. . :. .:::: . . . .... . NP_076 LGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQYVRSRPAPSPESIKRAKEMDL 480 490 500 510 520 530 500 510 520 530 540 pF1KE2 PEYALSLGLAVAPRVRF----LQKMQKQPTKELVRSQADKVIEPRAPS--LTNDEVEEFR ..::: :: ::... . . ::.: ..: : : : .. .. : NP_076 ----VGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRAT-IFEINASSRDLCSQVMRAKR 540 550 560 570 580 590 550 560 570 580 590 pF1KE2 AYFNEKMSILQKGGKRLEGTEHRQDNDTG-----------NEEQEEEEDDEEEMEEKLAK . .. .:.: . : ...:.. .: . :.::::. : .:. ... NP_076 QKDRKAIARFQQGQQ---GRQEQQEGPVGPAPSRPALQEKQPEKEEEEEAGESVEDIFSE 600 610 620 630 640 650 600 610 620 630 640 pF1KE2 AKGSQAP-SLPNTSEAQKIKE---------VPTQFLDRDEEE------EDADFLKVKRHN . : . : :: . .. .: .: . : : :. : . : . NP_076 VVGRKRQRSGPNRGAKRRREEARQRDQEFYIPYRPKDFDSERGLSISGEGGAFEQQAAGA 660 670 680 690 700 710 650 660 670 680 690 700 pF1KE2 VFGLDLKDEKTLQKKEPSKSSIKKKMTKVAEAKKVMKRNFKVN--KKITFTDEGELVQQW :. : . ..: . . . . .:: :... . :...:.. . :. . . .: :.: NP_076 VLDLMGDEAQNLTRGRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKW 720 730 740 750 760 770 710 720 730 740 750 760 pF1KE2 PQMQKSAIKDAEEDDDTGGINLHKAKERLQEEDKFDKEEYRKKIKAKHREKRLKEREARR : :: : : .:.: : . ... :: NP_076 KQKQK--IDD--RDSDEEGASDRRGPERRGGKRDRGQGASRPHAPGTPAGRVRPELKTKQ 780 790 800 810 820 >>NP_001104792 (OMIM: 611665) ATP-dependent RNA helicase (882 aa) initn: 586 init1: 267 opt: 642 Z-score: 381.5 bits: 81.7 E(85289): 1.6e-14 Smith-Waterman score: 716; 27.2% identity (59.6% similar) in 718 aa overlap (71-728:98-795) 50 60 70 80 90 100 pF1KE2 LKKPEWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTI :... :: ..::... :.. : ::..:: NP_001 FPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTI 70 80 90 100 110 120 110 120 130 140 150 pF1KE2 GLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTD-GLGVLIISPTRELAYQTFE . :.::::.. :.:::::: ::.:..: ::. :.. : .::.::::::: ::.. NP_001 PVILDGKDVVAMARTGSGKTACFLLPMFE---RLKTHSAQTGARALILSPTRELALQTLK 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE2 VLRKVGKNHDFSAGLIIGGKDLKHEAERIN-NINILVCTPGRLLQHMDETVSFHATDLQM ...:: ....::.:: .. . .. : .:.. :::::. :. .:.. .... NP_001 FTKELGKFTGLKTALILGGDRMEDQFAALHENPDIIIATPGRLV-HVAVEMSLKLQSVEY 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE2 LVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHE .:.:::::...::::. .. .: :: .::.::::: : . ..:: .: .: . . NP_001 VVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDV 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE2 KAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKK--SIVFFSSCKEVQYLYRVFCRL .: . :. .... . . : .:: .:.. .. . ..:: .. ....:: ... NP_001 DTKLNEQ--LKTSFFLVREDTKAAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQ 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE2 RPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDA : :: ... . : .:. . ..:..::.::::::.: .. :.... : . NP_001 R--VSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKG 370 380 390 400 410 400 410 420 430 440 pF1KE2 NTYIHRAGRTARYKEDGEALLILLPSEKAMVQQL---LQKKV----PVKEIK----IN-- . ..::.::.:: ..: : .. :.: .. .: : ... :.:: . .. NP_001 KLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHLFLGRSLTLARPLKEPSGVAGVDGM 420 430 440 450 460 470 450 460 470 480 490 pF1KE2 ----PEKLIDVQKK-LESILAQDQDLK---ERAQRCFVSYVRSVYLMKDKEVFDVSKLPI :....: . . :.: : . .:. . :. .:::: . . . .... . NP_001 LGRVPQSVVDEEDSGLQSTLEASLELRGLARVADNAQQQYVRSRPAPSPESIKRAKEMDL 480 490 500 510 520 530 500 510 520 530 540 pF1KE2 PEYALSLGLAVAPRVRF----LQKMQKQPTKELVRSQADKVIEPRAPS--LTNDEVEEFR ..::: :: ::... . . ::.: ..: : : : .. .. : NP_001 ----VGLGLHPLFSSRFEEEELQRLRLVDSIKNYRSRAT-IFEINASSRDLCSQVMRAKR 540 550 560 570 580 590 550 560 570 580 590 pF1KE2 AYFNEKMSILQKGGKRLEGTEHRQDNDTG-----------NEEQEEEEDDEEEMEEKLAK . .. .:.: . : ...:.. .: . :.::::. : .:. ... NP_001 QKDRKAIARFQQGQQ---GRQEQQEGPVGPAPSRPALQEKQPEKEEEEEAGESVEDIFSE 600 610 620 630 640 650 600 610 620 630 640 pF1KE2 AKGSQAP-SLPNTSEAQKIKE---------VPTQFLDRDEEE------EDADFLKVKRHN . : . : :: . .. .: .: . : : :. : . : . NP_001 VVGRKRQRSGPNRGAKRRREEARQRDQEFYIPYRPKDFDSERGLSISGEGGAFEQQAAGA 660 670 680 690 700 710 650 660 670 680 690 700 pF1KE2 VFGLDLKDEKTLQKKEPSKSSIKKKMTKVAEAKKVMKRNFKVN--KKITFTDEGELVQQW :. : . ..: . . . . .:: :... . :...:.. . :. . . .: :.: NP_001 VLDLMGDEAQNLTRGRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKW 720 730 740 750 760 770 710 720 730 740 750 760 pF1KE2 PQMQKSAIKDAEEDDDTGGINLHKAKERLQEEDKFDKEEYRKKIKAKHREKRLKEREARR : :: : : .:.: : . ... :: NP_001 KQKQK--IDD--RDSDEEGASDRRGPERRGGKRDRGQAGASRPHAPGTPAGRVRPELKTK 780 790 800 810 820 >>NP_001308759 (OMIM: 608170,616871) probable ATP-depend (496 aa) initn: 596 init1: 223 opt: 632 Z-score: 379.4 bits: 80.5 E(85289): 2.1e-14 Smith-Waterman score: 640; 33.2% identity (62.6% similar) in 404 aa overlap (68-450:54-450) 40 50 60 70 80 90 pF1KE2 RKQLKKPEWQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQK : :... . :.::.. . : :: NP_001 RYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQI 30 40 50 60 70 80 100 110 120 130 140 150 pF1KE2 QTIGLALQGKDVLGAAKTGSGKTLAFLVPV----LEALYRLQWTSTDGLGVLIISPTREL : : :.:.:..: : :::::::.: .:: :: :: ... .: ::: :.::: NP_001 QGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSREL 90 100 110 120 130 140 160 170 180 190 200 pF1KE2 AYQTFEVLRKVGK--NHDFSA----GLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMD : :: .:. . ..: : .: ::: ..:.. : : ......: :::::.. .. NP_001 ARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQ 150 160 170 180 190 200 210 220 230 240 250 260 pF1KE2 ETVSFHATDL-QMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLAR . . . :. ..:.::::::..:::: . ... . .:::::::::. :.....:. NP_001 KKMV--SLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAK 210 220 230 240 250 260 270 280 290 300 310 320 pF1KE2 LSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKE .: .: . : . . : . : .:. : :. : :.. ..: . . NP_001 SALVKPVTINVGRAGAASLDVIQEVEYVKEE--AKMVYLLECLQK-TPPPVLIFAEKKAD 270 280 290 300 310 330 340 350 360 370 380 pF1KE2 VQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVN :. ... . : :: .:.:: ..: .: .. . : . . :: :::.:..::::::.. NP_001 VDAIHEYL--LLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQ 320 330 340 350 360 370 390 400 410 420 430 pF1KE2 WVLQFDCPEDANTYIHRAGRTARYKEDGEALLIL--------LPSEKAMVQQLLQKKVPV :...: ::. ..:.:: :::.: . : : .. : . ::.. . :: :: NP_001 HVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPV 380 390 400 410 420 430 440 450 460 470 480 490 pF1KE2 KEI-KINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIP .. . . :...:. NP_001 LQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF 440 450 460 470 480 490 875 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 15:45:02 2016 done: Mon Nov 7 15:45:04 2016 Total Scan time: 11.580 Total Display time: 0.150 Function used was FASTA [36.3.4 Apr, 2011]