FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4327, 332 aa 1>>>pF1KE4327 332 - 332 aa - 332 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7031+/-0.000699; mu= 20.1683+/- 0.042 mean_var=77.6441+/-15.041, 0's: 0 Z-trim(111.2): 18 B-trim: 0 in 0/50 Lambda= 0.145553 statistics sampled from 12175 (12183) to 12175 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.739), E-opt: 0.2 (0.374), width: 16 Scan time: 2.150 The best scores are: opt bits E(32554) CCDS59180.1 IL9R gene_id:3581|Hs108|chrX ( 342) 2406 514.3 5.7e-146 CCDS59180.1 IL9R gene_id:3581|Hs108|chrY ( 342) 2406 514.3 5.7e-146 CCDS14771.4 IL9R gene_id:3581|Hs108|chrX ( 521) 994 218.0 1.4e-56 CCDS14771.4 IL9R gene_id:3581|Hs108|chrY ( 521) 994 218.0 1.4e-56 >>CCDS59180.1 IL9R gene_id:3581|Hs108|chrX (342 aa) initn: 2406 init1: 2406 opt: 2406 Z-score: 2734.1 bits: 514.3 E(32554): 5.7e-146 Smith-Waterman score: 2406; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:11-342) 10 20 30 40 50 pF1KE4 MHLGSNCCKNGQTLLQRTCHGVSCCGWWFQAARSILGKGPSAQSLAGWTL :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 MPQTCDGTGQMHLGSNCCKNGQTLLQRTCHGVSCCGWWFQAARSILGKGPSAQSLAGWTL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 ESEALRRDMGTWLLACICICTCVCLGVSVTGEGQGPRSRTFTCLTNNILRIDCHWSAPEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 ESEALRRDMGTWLLACICICTCVCLGVSVTGEGQGPRSRTFTCLTNNILRIDCHWSAPEL 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 GQGSSPWLLFTRLLAAHISASCGAVSAPSCCHLRQCSCHLTISPSLSTTACLGGSRSAWW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 GQGSSPWLLFTRLLAAHISASCGAVSAPSCCHLRQCSCHLTISPSLSTTACLGGSRSAWW 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 TRSTCPGDTSNISSGHCILTWSISPALEPMTTLLSYELAFKKQEEAWEQAQHRDHIVGVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 TRSTCPGDTSNISSGHCILTWSISPALEPMTTLLSYELAFKKQEEAWEQAQHRDHIVGVT 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 WLILEAFELDPGFIHEARLRVQMATLEDDVVEEERYTGQWSEWSQPVCFQAPQRQGPLIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 WLILEAFELDPGFIHEARLRVQMATLEDDVVEEERYTGQWSEWSQPVCFQAPQRQGPLIP 250 260 270 280 290 300 300 310 320 330 pF1KE4 PWGWPGNTLVAVSIFLLLTGPTYLLFKLSPRLGWGPTGPVCC :::::::::::::::::::::::::::::::::::::::::: CCDS59 PWGWPGNTLVAVSIFLLLTGPTYLLFKLSPRLGWGPTGPVCC 310 320 330 340 >>CCDS59180.1 IL9R gene_id:3581|Hs108|chrY (342 aa) initn: 2406 init1: 2406 opt: 2406 Z-score: 2734.1 bits: 514.3 E(32554): 5.7e-146 Smith-Waterman score: 2406; 100.0% identity (100.0% similar) in 332 aa overlap (1-332:11-342) 10 20 30 40 50 pF1KE4 MHLGSNCCKNGQTLLQRTCHGVSCCGWWFQAARSILGKGPSAQSLAGWTL :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 MPQTCDGTGQMHLGSNCCKNGQTLLQRTCHGVSCCGWWFQAARSILGKGPSAQSLAGWTL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 ESEALRRDMGTWLLACICICTCVCLGVSVTGEGQGPRSRTFTCLTNNILRIDCHWSAPEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 ESEALRRDMGTWLLACICICTCVCLGVSVTGEGQGPRSRTFTCLTNNILRIDCHWSAPEL 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 GQGSSPWLLFTRLLAAHISASCGAVSAPSCCHLRQCSCHLTISPSLSTTACLGGSRSAWW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 GQGSSPWLLFTRLLAAHISASCGAVSAPSCCHLRQCSCHLTISPSLSTTACLGGSRSAWW 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 TRSTCPGDTSNISSGHCILTWSISPALEPMTTLLSYELAFKKQEEAWEQAQHRDHIVGVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 TRSTCPGDTSNISSGHCILTWSISPALEPMTTLLSYELAFKKQEEAWEQAQHRDHIVGVT 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 WLILEAFELDPGFIHEARLRVQMATLEDDVVEEERYTGQWSEWSQPVCFQAPQRQGPLIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 WLILEAFELDPGFIHEARLRVQMATLEDDVVEEERYTGQWSEWSQPVCFQAPQRQGPLIP 250 260 270 280 290 300 300 310 320 330 pF1KE4 PWGWPGNTLVAVSIFLLLTGPTYLLFKLSPRLGWGPTGPVCC :::::::::::::::::::::::::::::::::::::::::: CCDS59 PWGWPGNTLVAVSIFLLLTGPTYLLFKLSPRLGWGPTGPVCC 310 320 330 340 >>CCDS14771.4 IL9R gene_id:3581|Hs108|chrX (521 aa) initn: 1526 init1: 989 opt: 994 Z-score: 1129.4 bits: 218.0 E(32554): 1.4e-56 Smith-Waterman score: 1512; 78.9% identity (84.8% similar) in 289 aa overlap (47-322:10-297) 20 30 40 50 60 70 pF1KE4 RTCHGVSCCGWWFQAARSILGKGPSAQSLAGWTLESEALRRDMGTWLLACICICTCVCLG :::::::::::::::::::::::::::::: CCDS14 MGLGRCIWEGWTLESEALRRDMGTWLLACICICTCVCLG 10 20 30 80 90 100 110 120 130 pF1KE4 VSVTGEGQGPRSRTFTCLTNNILRIDCHWSAPELGQGSSPWLLFTRLLAAHISASCGAVS ::::::::::::::::::::::::::::::::::::::::::::: : . .: . CCDS14 VSVTGEGQGPRSRTFTCLTNNILRIDCHWSAPELGQGSSPWLLFTSNQAPGGTHKC-ILR 40 50 60 70 80 90 140 150 160 170 180 pF1KE4 APSCCHLRQCSCHLTISPSLSTT--ACLGGSRSA------WWTRSTC----PGDT-SNIS . : . :. : ... : :..: ... . : :.: :::: CCDS14 GSECTVVLPPEAVLVPSDNFTITFHHCMSGREQVSLVDPEYLPRRHVKLDPPSDLQSNIS 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE4 SGHCILTWSISPALEPMTTLLSYELAFKKQEEAWEQAQHRDHIVGVTWLILEAFELDPGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 SGHCILTWSISPALEPMTTLLSYELAFKKQEEAWEQAQHRDHIVGVTWLILEAFELDPGF 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE4 IHEARLRVQMATLEDDVVEEERYTGQWSEWSQPVCFQAPQRQGPLIPPWGWPGNTLVAVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 IHEARLRVQMATLEDDVVEEERYTGQWSEWSQPVCFQAPQRQGPLIPPWGWPGNTLVAVS 220 230 240 250 260 270 310 320 330 pF1KE4 IFLLLTGPTYLLFKLSPRLGWGPTGPVCC ::::::::::::::::::. CCDS14 IFLLLTGPTYLLFKLSPRVKRIFYQNVPSPAMFFQPLYSVHNGNFQTWMGAHGAGVLLSQ 280 290 300 310 320 330 >>CCDS14771.4 IL9R gene_id:3581|Hs108|chrY (521 aa) initn: 1526 init1: 989 opt: 994 Z-score: 1129.4 bits: 218.0 E(32554): 1.4e-56 Smith-Waterman score: 1512; 78.9% identity (84.8% similar) in 289 aa overlap (47-322:10-297) 20 30 40 50 60 70 pF1KE4 RTCHGVSCCGWWFQAARSILGKGPSAQSLAGWTLESEALRRDMGTWLLACICICTCVCLG :::::::::::::::::::::::::::::: CCDS14 MGLGRCIWEGWTLESEALRRDMGTWLLACICICTCVCLG 10 20 30 80 90 100 110 120 130 pF1KE4 VSVTGEGQGPRSRTFTCLTNNILRIDCHWSAPELGQGSSPWLLFTRLLAAHISASCGAVS ::::::::::::::::::::::::::::::::::::::::::::: : . .: . CCDS14 VSVTGEGQGPRSRTFTCLTNNILRIDCHWSAPELGQGSSPWLLFTSNQAPGGTHKC-ILR 40 50 60 70 80 90 140 150 160 170 180 pF1KE4 APSCCHLRQCSCHLTISPSLSTT--ACLGGSRSA------WWTRSTC----PGDT-SNIS . : . :. : ... : :..: ... . : :.: :::: CCDS14 GSECTVVLPPEAVLVPSDNFTITFHHCMSGREQVSLVDPEYLPRRHVKLDPPSDLQSNIS 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE4 SGHCILTWSISPALEPMTTLLSYELAFKKQEEAWEQAQHRDHIVGVTWLILEAFELDPGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 SGHCILTWSISPALEPMTTLLSYELAFKKQEEAWEQAQHRDHIVGVTWLILEAFELDPGF 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE4 IHEARLRVQMATLEDDVVEEERYTGQWSEWSQPVCFQAPQRQGPLIPPWGWPGNTLVAVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS14 IHEARLRVQMATLEDDVVEEERYTGQWSEWSQPVCFQAPQRQGPLIPPWGWPGNTLVAVS 220 230 240 250 260 270 310 320 330 pF1KE4 IFLLLTGPTYLLFKLSPRLGWGPTGPVCC ::::::::::::::::::. CCDS14 IFLLLTGPTYLLFKLSPRVKRIFYQNVPSPAMFFQPLYSVHNGNFQTWMGAHGAGVLLSQ 280 290 300 310 320 330 332 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:08:22 2016 done: Sat Nov 5 23:08:23 2016 Total Scan time: 2.150 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]