FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5624, 475 aa 1>>>pF1KE5624 475 - 475 aa - 475 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7060+/-0.00117; mu= 15.0677+/- 0.070 mean_var=65.1978+/-12.784, 0's: 0 Z-trim(101.3): 24 B-trim: 0 in 0/49 Lambda= 0.158839 statistics sampled from 6468 (6474) to 6468 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.563), E-opt: 0.2 (0.199), width: 16 Scan time: 2.930 The best scores are: opt bits E(32554) CCDS82917.1 NSUN7 gene_id:79730|Hs108|chr4 ( 475) 3082 715.7 2.6e-206 CCDS3461.2 NSUN7 gene_id:79730|Hs108|chr4 ( 718) 3024 702.5 3.8e-202 >>CCDS82917.1 NSUN7 gene_id:79730|Hs108|chr4 (475 aa) initn: 3082 init1: 3082 opt: 3082 Z-score: 3817.3 bits: 715.7 E(32554): 2.6e-206 Smith-Waterman score: 3082; 99.8% identity (100.0% similar) in 475 aa overlap (1-475:1-475) 10 20 30 40 50 60 pF1KE5 MLNSTGELEFSNEEDPEIISQLTSLPLSGGKSSAGVPEKTGYPDSVYVMAANIFQGIRIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MLNSTGELEFSNEEDPEIISQLTSLPLSGGKSSAGVPEKTGYPDSVYVMAANIFQGIRIE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 KSAQKVLIKYGNEPLRSLSESEDQSFQRLSYELAFSALKYQDILETILIDSCIFPSTTIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 KSAQKVLIKYGNEPLRSLSESEDQSFQRLSYELAFSALKYQDILETILIDSCIFPSTTIP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 DHLSSLIIVMLYDFQDRKFQTRVLSDNEEPISEVQEVENLLNSFKIKLAAALARCRIKHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 DHLSSLIIVMLYDFQDRKFQTRVLSDNEEPISEVQEVENLLNSFKIKLAAALARCRIKHD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 ALSIYHILPETVRKQELRASTLPLYAWINTCKISPEEVYNNLKRRGYNKVKSVLHIDDKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 ALSIYHILPETVRKQELRASTLPLYAWINTCKISPEEVYNNLKRRGYNKVKSVLHIDDKV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 FAVDQHCYDVLIFPSHLKNDLINIDLFKDYKLIFQDKSRSLAVHSVKALLNMDDDVLMVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 FAVDQHCYDVLIFPSHLKNDLINIDLFKDYKLIFQDKSRSLAVHSVKALLNMDDDVLMVN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 TGSWYTVAHMSILTNNNTSKVFVCGVQSQAKDPDLKTLFTKIGCKNIEILHEKFINIESK :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 TGSWYTVSHMSILTNNNTSKVFVCGVQSQAKDPDLKTLFTKIGCKNIEILHEKFINIESK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DHRLQKVKVILLLPRCSGLGVSNPVEFILNEHEDTEFLKDHSQGGISVDKLHVLAQQQYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 DHRLQKVKVILLLPRCSGLGVSNPVEFILNEHEDTEFLKDHSQGGISVDKLHVLAQQQYE 370 380 390 400 410 420 430 440 450 460 470 pF1KE5 QLTHAMKFTKAQAVVYCTCSVFPEENEAVVKKALEFQDLGNKGQPYSGTLLRQCL ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 QLTHAMKFTKAQAVVYCTCSVFPEENEAVVKKALEFQDLGNKGQPYSGTLLRQCL 430 440 450 460 470 >>CCDS3461.2 NSUN7 gene_id:79730|Hs108|chr4 (718 aa) initn: 3022 init1: 3022 opt: 3024 Z-score: 3742.6 bits: 702.5 E(32554): 3.8e-202 Smith-Waterman score: 3024; 98.3% identity (98.7% similar) in 476 aa overlap (1-474:1-476) 10 20 30 40 50 60 pF1KE5 MLNSTGELEFSNEEDPEIISQLTSLPLSGGKSSAGVPEKTGYPDSVYVMAANIFQGIRIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MLNSTGELEFSNEEDPEIISQLTSLPLSGGKSSAGVPEKTGYPDSVYVMAANIFQGIRIE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 KSAQKVLIKYGNEPLRSLSESEDQSFQRLSYELAFSALKYQDILETILIDSCIFPSTTIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KSAQKVLIKYGNEPLRSLSESEDQSFQRLSYELAFSALKYQDILETILIDSCIFPSTTIP 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 DHLSSLIIVMLYDFQDRKFQTRVLSDNEEPISEVQEVENLLNSFKIKLAAALARCRIKHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 DHLSSLIIVMLYDFQDRKFQTRVLSDNEEPISEVQEVENLLNSFKIKLAAALARCRIKHD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 ALSIYHILPETVRKQELRASTLPLYAWINTCKISPEEVYNNLKRRGYNKVKSVLHIDDKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ALSIYHILPETVRKQELRASTLPLYAWINTCKISPEEVYNNLKRRGYNKVKSVLHIDDKV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 FAVDQHCYDVLIFPSHLKNDLINIDLFKDYKLIFQDKSRSLAVHSVKALLNMDDDVLMVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 FAVDQHCYDVLIFPSHLKNDLINIDLFKDYKLIFQDKSRSLAVHSVKALLNMDDDVLMVN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 TGSWYTVAHMSILTNNNTSKVFVCGVQSQAKDPDLKTLFTKIGCKNIEILHEKFINIESK :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TGSWYTVSHMSILTNNNTSKVFVCGVQSQAKDPDLKTLFTKIGCKNIEILHEKFINIESK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 DHRLQKVKVILLLPRCSGLGVSNPVEFILNEHEDTEFLKDHSQGGISVDKLHVLAQQQYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 DHRLQKVKVILLLPRCSGLGVSNPVEFILNEHEDTEFLKDHSQGGISVDKLHVLAQQQYE 370 380 390 400 410 420 430 440 450 460 470 pF1KE5 QLTHAMKFTKAQAVVYCTCSVFPEENEAVVKKALEFQDLGNKGQPY--SGTLLRQCL :::::::::::::::::::::::::::::::::::::::::::::: : .: : CCDS34 QLTHAMKFTKAQAVVYCTCSVFPEENEAVVKKALEFQDLGNKGQPYRLSPPVLPLCSLKE 430 440 450 460 470 480 CCDS34 IQLSTDKFFRMEPSEITNGCFLSILTRERDPSETVSVNDVLARAAAKGLLDGIELGKSSK 490 500 510 520 530 540 475 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:16:44 2016 done: Tue Nov 8 05:16:45 2016 Total Scan time: 2.930 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]