FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2623, 227 aa 1>>>pF1KE2623 227 - 227 aa - 227 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.8020+/-0.00106; mu= -0.3605+/- 0.063 mean_var=223.0261+/-44.789, 0's: 0 Z-trim(109.8): 26 B-trim: 0 in 0/54 Lambda= 0.085881 statistics sampled from 11102 (11112) to 11102 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.682), E-opt: 0.2 (0.341), width: 16 Scan time: 1.440 The best scores are: opt bits E(32554) CCDS5828.1 CHCHD3 gene_id:54927|Hs108|chr7 ( 227) 1440 190.6 7.1e-49 >>CCDS5828.1 CHCHD3 gene_id:54927|Hs108|chr7 (227 aa) initn: 1440 init1: 1440 opt: 1440 Z-score: 990.9 bits: 190.6 E(32554): 7.1e-49 Smith-Waterman score: 1440; 100.0% identity (100.0% similar) in 227 aa overlap (1-227:1-227) 10 20 30 40 50 60 pF1KE2 MGGTTSTRRVTFEADENENITVVKGIRLSENVIDRMKESSPSGSKSQRYSGAYGASVSDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MGGTTSTRRVTFEADENENITVVKGIRLSENVIDRMKESSPSGSKSQRYSGAYGASVSDE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ELKRRVAEELALEQAKKESEDQKRLKQAKELDRERAAANEQLTRAILRERICSEEERAKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 ELKRRVAEELALEQAKKESEDQKRLKQAKELDRERAAANEQLTRAILRERICSEEERAKA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KHLARQLEEKDRVLKKQDAFYKEQLARLEERSSEFYRVTTEQYQKAAEEVEAKFKRYESH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 KHLARQLEEKDRVLKKQDAFYKEQLARLEERSSEFYRVTTEQYQKAAEEVEAKFKRYESH 130 140 150 160 170 180 190 200 210 220 pF1KE2 PVCADLQAKILQCYRENTHQTLKCSALATQYMHCVNHAKQSMLEKGG ::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 PVCADLQAKILQCYRENTHQTLKCSALATQYMHCVNHAKQSMLEKGG 190 200 210 220 227 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 17:16:10 2016 done: Tue Nov 8 17:16:10 2016 Total Scan time: 1.440 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]