Result of FASTA (ccds) for
pFN21AE0692
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0692, 402 aa
1>>>pF1KE0692 402 - 402 aa - 402 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4082+/-0.00081; mu= 8.4050+/- 0.049
mean_var=153.4582+/-32.433, 0's: 0 Z-trim(113.4): 135 B-trim: 353 in 1/52
Lambda= 0.103533
statistics sampled from 13911 (14073) to 13911 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.772), E-opt: 0.2 (0.432), width: 16
Scan time: 3.260
The best scores are: opt bits E(32554)
CCDS2662.1 STAC gene_id:6769|Hs108|chr3 ( 402) 2737 420.3 1.6e-117
CCDS77722.1 STAC gene_id:6769|Hs108|chr3 ( 341) 1451 228.1 9.5e-60
CCDS11335.1 STAC2 gene_id:342667|Hs108|chr17 ( 411) 979 157.7 1.8e-38
CCDS66405.1 STAC3 gene_id:246329|Hs108|chr12 ( 178) 431 75.6 4.2e-14
CCDS66406.1 STAC3 gene_id:246329|Hs108|chr12 ( 325) 431 75.8 6.6e-14
CCDS8936.1 STAC3 gene_id:246329|Hs108|chr12 ( 364) 431 75.8 7.3e-14
>>CCDS2662.1 STAC gene_id:6769|Hs108|chr3 (402 aa)
initn: 2737 init1: 2737 opt: 2737 Z-score: 2223.3 bits: 420.3 E(32554): 1.6e-117
Smith-Waterman score: 2737; 99.8% identity (100.0% similar) in 402 aa overlap (1-402:1-402)
10 20 30 40 50 60
pF1KE0 MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRSLSFKTKSLRSKSADNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRSLSFKTKSLRSKSADNF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFHEYIFKKPTF
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
CCDS26 FQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFQEYIFKKPTF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 CDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQRCMGKLPKGFRRYYSSPLLIHEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 CDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQRCMGKLPKGFRRYYSSPLLIHEQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 FGCIKEVMPIACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 FGCIKEVMPIACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEEA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 NGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTYVALYKFVPQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 NGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTYVALYKFVPQE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE0 NEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRTFIGCKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 NEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRTFIGCKE
310 320 330 340 350 360
370 380 390 400
pF1KE0 QGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
::::::::::::::::::::::::::::::::::::::::::
CCDS26 QGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
370 380 390 400
>>CCDS77722.1 STAC gene_id:6769|Hs108|chr3 (341 aa)
initn: 1442 init1: 1442 opt: 1451 Z-score: 1186.2 bits: 228.1 E(32554): 9.5e-60
Smith-Waterman score: 2158; 84.6% identity (84.8% similar) in 402 aa overlap (1-402:1-341)
10 20 30 40 50 60
pF1KE0 MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRSLSFKTKSLRSKSADNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRSLSFKTKSLRSKSADNF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 FQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFHEYIFKKPTF
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
CCDS77 FQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFQEYIFKKPTF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 CDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQRCMGKLPKGFRRYYSSPLLIHEQ
:::::::::
CCDS77 CDVCNHMIV---------------------------------------------------
190 200 210 220 230 240
pF1KE0 FGCIKEVMPIACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEEA
::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 ----------ACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEEA
130 140 150 160 170
250 260 270 280 290 300
pF1KE0 NGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTYVALYKFVPQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 NGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTYVALYKFVPQE
180 190 200 210 220 230
310 320 330 340 350 360
pF1KE0 NEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRTFIGCKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS77 NEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRTFIGCKE
240 250 260 270 280 290
370 380 390 400
pF1KE0 QGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
::::::::::::::::::::::::::::::::::::::::::
CCDS77 QGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
300 310 320 330 340
>>CCDS11335.1 STAC2 gene_id:342667|Hs108|chr17 (411 aa)
initn: 961 init1: 452 opt: 979 Z-score: 804.1 bits: 157.7 E(32554): 1.8e-38
Smith-Waterman score: 1084; 46.1% identity (70.8% similar) in 414 aa overlap (16-402:11-411)
10 20 30 40 50 60
pF1KE0 MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRSLSFKTKSLRSKSADNF
: .:. ...::. .: . ::.:::..:::::.:: ::::: .::
CCDS11 MTEMSEKENEPDDAA-THSPPGTVS-ALQETKLQRFKRSLSLKTI-LRSKSLENF
10 20 30 40 50
70 80 90 100
pF1KE0 FQRTNSEDMKLQAH-MVAEISPSSSPLPAP-----GSLTSTPAR-------AGLHPGGKA
: :..:: .: .. ... .: : : : : : .:. :.:.: .
CCDS11 FLRSGSE-LKCPTEVLLTPPTPLPPPSPPPTASDRGLATPSPSPCPVPRPLAALKPV-RL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE0 HAFHEYIFKKPTFCDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQRCMGKLPKGF
:.:.:..::. . :..:...::: :.:.::::: ::.:.: :.. .. :.: :: .:
CCDS11 HSFQEHVFKRASPCELCHQLIVG-NSKQGLRCKMCKVSVHLWCSEEISHQQCPGKTSTSF
120 130 140 150 160
170 180 190 200 210 220
pF1KE0 RRYYSSPLLIHEQFG-CI--KEVMPIACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDS
:: .:::::.:: : :: : . ..::::::::::.::::: ...: .: :.:
CCDS11 RRNFSSPLLVHEPPPVCATSKESPPTGDSGKVDPVYETLRYGTSLAL-MNRSSFSSTSES
170 180 190 200 210 220
230 240 250 260 270
pF1KE0 PHRTSTSDLVEVPEEANGP------GGGYDLRKRSNSVFTYP---ENGTDDFRDPAKNIN
: : : :. :. :...: : : .. ::: : :. . ..:....
CCDS11 PTR-SLSERDELTEDGEGSIRSSEEGPG----DSASPVFTAPAESEGPGPEEKSPGQQLP
230 240 250 260 270 280
280 290 300 310 320 330
pF1KE0 HQGSLSKDPLQMNTYVALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFP
...: :: : .:::::::.::::.:: ..::: : :..::::::::::: ::.::::
CCDS11 -KATLRKDVGPMYSYVALYKFLPQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFP
290 300 310 320 330 340
340 350 360 370 380 390
pF1KE0 ANFVQRLQQNEKIFRCVRTFIGCKEQGQITLKENQICVS--SEEEQDGFIRVLSGKKKGL
::::::.. .:...:: . : : :::: ..::::::::. .. :::::: ::::.::
CCDS11 ANFVQRVRPGENVWRCCQPFSGNKEQGYMSLKENQICVGVGRSKDADGFIRVSSGKKRGL
350 360 370 380 390 400
400
pF1KE0 IPLDVLENI
.:.:.: .:
CCDS11 VPVDALTEI
410
>>CCDS66405.1 STAC3 gene_id:246329|Hs108|chr12 (178 aa)
initn: 417 init1: 417 opt: 431 Z-score: 366.7 bits: 75.6 E(32554): 4.2e-14
Smith-Waterman score: 431; 41.7% identity (76.4% similar) in 144 aa overlap (260-402:35-178)
230 240 250 260 270 280
pF1KE0 TSDLVEVPEEANGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNT
:..:. . :.. . . . .. .:..
CCDS66 ERKKGQADKKNPVAAMMEEEPESARPEEGKPQDGNPEGDKKAEKKTPDDKHKQPGFQQSH
10 20 30 40 50 60
290 300 310 320 330 340
pF1KE0 Y-VALYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKI
: ::::.: :..::.. ::. ::...::::.::.::: ...:::: ::. :.. .:..
CCDS66 YFVALYRFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERV
70 80 90 100 110 120
350 360 370 380 390 400
pF1KE0 FRCVRTFIGCKEQGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
: .:.:.: .: ::::::..:: :.. .: :...: .:.: ::.: : ::.:
CCDS66 HRVTRSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDFLEEI
130 140 150 160 170
>>CCDS66406.1 STAC3 gene_id:246329|Hs108|chr12 (325 aa)
initn: 692 init1: 417 opt: 431 Z-score: 363.1 bits: 75.8 E(32554): 6.6e-14
Smith-Waterman score: 797; 40.9% identity (69.8% similar) in 298 aa overlap (106-402:49-325)
80 90 100 110 120 130
pF1KE0 VAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFHEYIFKKPTFCDVCNHMIVGTNAKH
: : :....:::: ::::: .::: : :
CCDS66 GPIYYIYEEEEEEEEEEEEPPPEPPKLVNDKPHKFKDHFFKKPKFCDVCARMIV-LNNKF
20 30 40 50 60 70
140 150 160 170 180 190
pF1KE0 GLRCKACKMSIHHKCTDGLAPQRCMGKLPKGFRRYYSSPLLIHEQFGCIKEVMPIACGNK
::::: :: .::..: . . :::.::.: ::.: ::::: ..:..:.:. .. .:.
CCDS66 GLRCKNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSSPLYSNQQYACVKD---LSAANR
80 90 100 110 120 130
200 210 220 230 240 250
pF1KE0 VDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDLVEVPEEANGPGGGYDLRKRSNS
:::.:::: :. .:.. .: .:. . . .. . : :: : : :
CCDS66 NDPVFETLRTGVIMANKERK----KGQADKKNPVAAMMEEEPESAR-PEEGK--------
140 150 160 170 180
260 270 280 290 300 310
pF1KE0 VFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTY-VALYKFVPQENEDLEMRPGDIITL
:..:. . :.. . . . .. .:.. : ::::.: :..::.. ::. ::.
CCDS66 ----PQDGNPEGDKKAEKKTPDDKHKQPGFQQSHYFVALYRFKALEKDDLDFPPGEKITV
190 200 210 220 230
320 330 340 350 360 370
pF1KE0 LEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCVRTFIGCKEQGQITLKENQICVS
..::::.::.::: ...:::: ::. :.. .:.. : .:.:.: .: ::::::..:: :.
CCDS66 IDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVTRSFVGNREIGQITLKKDQIVVQ
240 250 260 270 280 290
380 390 400
pF1KE0 SEEEQDGFIRVLSGKKKGLIPLDVLENI
. .: :...: .:.: ::.: : ::.:
CCDS66 KGDEAGGYVKVYTGRKVGLFPTDFLEEI
300 310 320
>>CCDS8936.1 STAC3 gene_id:246329|Hs108|chr12 (364 aa)
initn: 692 init1: 417 opt: 431 Z-score: 362.4 bits: 75.8 E(32554): 7.3e-14
Smith-Waterman score: 807; 36.0% identity (63.2% similar) in 394 aa overlap (17-402:4-364)
10 20 30 40 50
pF1KE0 MIPPSSPREDGVDGLPKEAVGAEQPPSPASTSSQESKLQKLKRSL---SFKTKSLR----
::.. . .: :: : ..: ::.::. : : :: ..
CCDS89 MTEKEVLESPKPSFPAET--RQSGLQRLKQLLRKGSTGTKEMELPPE
10 20 30 40
60 70 80 90 100 110
pF1KE0 SKSADNFFQRTNSEDMKLQAHMVAEISPSSSPLPAPGSLTSTPARAGLHPGGKAHAFHEY
.. . .. . . . : : : : .:.. : : :...
CCDS89 PQANGEAVGAGGGPIYYIYEEEEEEEEEEEEPPPEPPKLVND----------KPHKFKDH
50 60 70 80 90
120 130 140 150 160 170
pF1KE0 IFKKPTFCDVCNHMIVGTNAKHGLRCKACKMSIHHKCTDGLAPQRCMGKLPKGFRRYYSS
.:::: ::::: .::: : : ::::: :: .::..: . . :::.::.: ::.: :::
CCDS89 FFKKPKFCDVCARMIV-LNNKFGLRCKNCKTNIHEHCQSYVEMQRCFGKIPPGFHRAYSS
100 110 120 130 140 150
180 190 200 210 220 230
pF1KE0 PLLIHEQFGCIKEVMPIACGNKVDPVYETLRFGTSLAQRTKKGSSGSGSDSPHRTSTSDL
:: ..:..:.:. .. .:. :::.:::: :. .:.. .: .:. . . .. .
CCDS89 PLYSNQQYACVKD---LSAANRNDPVFETLRTGVIMANKERK----KGQADKKNPVAAMM
160 170 180 190 200
240 250 260 270 280 290
pF1KE0 VEVPEEANGPGGGYDLRKRSNSVFTYPENGTDDFRDPAKNINHQGSLSKDPLQMNTY-VA
: :: : : : :..:. . :.. . . . .. .:.. : ::
CCDS89 EEEPESAR-PEEGK------------PQDGNPEGDKKAEKKTPDDKHKQPGFQQSHYFVA
210 220 230 240 250
300 310 320 330 340 350
pF1KE0 LYKFVPQENEDLEMRPGDIITLLEDSNEDWWKGKIQDRIGFFPANFVQRLQQNEKIFRCV
::.: :..::.. ::. ::...::::.::.::: ...:::: ::. :.. .:.. : .
CCDS89 LYRFKALEKDDLDFPPGEKITVIDDSNEEWWRGKIGEKVGFFPPNFIIRVRAGERVHRVT
260 270 280 290 300 310
360 370 380 390 400
pF1KE0 RTFIGCKEQGQITLKENQICVSSEEEQDGFIRVLSGKKKGLIPLDVLENI
:.:.: .: ::::::..:: :.. .: :...: .:.: ::.: : ::.:
CCDS89 RSFVGNREIGQITLKKDQIVVQKGDEAGGYVKVYTGRKVGLFPTDFLEEI
320 330 340 350 360
402 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 08:03:25 2016 done: Sat Nov 5 08:03:26 2016
Total Scan time: 3.260 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]