Result of FASTA (omim) for pFN21AB3487
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB3487, 664 aa
  1>>>pF1KB3487 664 - 664 aa - 664 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.9696+/-0.000407; mu= 15.4910+/- 0.025
 mean_var=70.4437+/-14.281, 0's: 0 Z-trim(111.1): 36  B-trim: 21 in 1/50
 Lambda= 0.152810
 statistics sampled from 19626 (19650) to 19626 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.598), E-opt: 0.2 (0.23), width:  16
 Scan time: 10.840

The best scores are:                                      opt bits E(85289)
NP_004159 (OMIM: 252011,256000,600857,613642,61416 ( 664) 4485 998.5       0
XP_016865174 (OMIM: 252011,256000,600857,613642,61 ( 785) 4315 961.0       0
XP_011512374 (OMIM: 252011,256000,600857,613642,61 ( 680) 4305 958.8       0
NP_001317687 (OMIM: 252011,256000,600857,613642,61 ( 583) 3501 781.5       0
XP_011512375 (OMIM: 252011,256000,600857,613642,61 ( 599) 3501 781.5       0
NP_001281261 (OMIM: 252011,256000,600857,613642,61 ( 616) 3474 775.6       0


>>NP_004159 (OMIM: 252011,256000,600857,613642,614165) s  (664 aa)
 initn: 4485 init1: 4485 opt: 4485  Z-score: 5340.5  bits: 998.5 E(85289):    0
Smith-Waterman score: 4485; 99.8% identity (100.0% similar) in 664 aa overlap (1-664:1-664)

               10        20        30        40        50        60
pF1KB3 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB3 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB3 IDEYDYSKPIQGQQKKPFEEHWRKHTLSFVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
       ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_004 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
              610       620       630       640       650       660

           
pF1KB3 IRSY
       ::::
NP_004 IRSY
           

>>XP_016865174 (OMIM: 252011,256000,600857,613642,614165  (785 aa)
 initn: 4315 init1: 4315 opt: 4315  Z-score: 5136.7  bits: 961.0 E(85289):    0
Smith-Waterman score: 4315; 99.5% identity (100.0% similar) in 640 aa overlap (1-640:1-640)

               10        20        30        40        50        60
pF1KB3 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB3 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB3 IDEYDYSKPIQGQQKKPFEEHWRKHTLSFVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
       ::::::::::::::::::::::::::::.::::::::..:                    
XP_016 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKVSVELVLTTAQHPHGPAQACGLAL
              610       620       630       640       650       660

                                                                   
pF1KB3 IRSY                                                        
                                                                   
XP_016 LMVNGEEQARFKSTPDRFEAPLKKALRQQSGFGLETESSSCRWFRGALRKGCSVVCARWT
              670       680       690       700       710       720

>>XP_011512374 (OMIM: 252011,256000,600857,613642,614165  (680 aa)
 initn: 4305 init1: 4305 opt: 4305  Z-score: 5125.8  bits: 958.8 E(85289):    0
Smith-Waterman score: 4305; 99.7% identity (99.8% similar) in 638 aa overlap (1-638:1-638)

               10        20        30        40        50        60
pF1KB3 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB3 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB3 IDEYDYSKPIQGQQKKPFEEHWRKHTLSFVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
       ::::::::::::::::::::::::::::.::::::: :                      
XP_011 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKCTAREQHITHRKQLCSCDGGLSTR
              610       620       630       640       650       660

                           
pF1KB3 IRSY                
                           
XP_011 KERTIGARSSLNKSESHYAV
              670       680

>>NP_001317687 (OMIM: 252011,256000,600857,613642,614165  (583 aa)
 initn: 3501 init1: 3501 opt: 3501  Z-score: 4169.0  bits: 781.5 E(85289):    0
Smith-Waterman score: 3777; 87.7% identity (87.8% similar) in 664 aa overlap (1-664:1-583)

               10        20        30        40        50        60
pF1KB3 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
       :::::::::::::::::::::::::::::::::::::                       
NP_001 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQK-----------------------
              490       500       510                              

              550       560       570       580       590       600
pF1KB3 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
                                                                 ::
NP_001 ----------------------------------------------------------VR
                                                                   

              610       620       630       640       650       660
pF1KB3 IDEYDYSKPIQGQQKKPFEEHWRKHTLSFVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
       ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_001 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
     520       530       540       550       560       570         

           
pF1KB3 IRSY
       ::::
NP_001 IRSY
     580   

>>XP_011512375 (OMIM: 252011,256000,600857,613642,614165  (599 aa)
 initn: 3761 init1: 3501 opt: 3501  Z-score: 4168.8  bits: 781.5 E(85289):    0
Smith-Waterman score: 3597; 87.0% identity (87.1% similar) in 638 aa overlap (1-638:1-557)

               10        20        30        40        50        60
pF1KB3 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB3 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB3 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB3 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB3 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB3 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB3 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB3 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
       :::::::::::::::::::::::::::::::::::::                       
XP_011 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQK-----------------------
              490       500       510                              

              550       560       570       580       590       600
pF1KB3 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
                                                                 ::
XP_011 ----------------------------------------------------------VR
                                                                   

              610       620       630       640       650       660
pF1KB3 IDEYDYSKPIQGQQKKPFEEHWRKHTLSFVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
       ::::::::::::::::::::::::::::.::::::: :                      
XP_011 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKCTAREQHITHRKQLCSCDGGLSTR
     520       530       540       550       560       570         

                           
pF1KB3 IRSY                
                           
XP_011 KERTIGARSSLNKSESHYAV
     580       590         

>>NP_001281261 (OMIM: 252011,256000,600857,613642,614165  (616 aa)
 initn: 3474 init1: 3474 opt: 3474  Z-score: 4136.4  bits: 775.6 E(85289):    0
Smith-Waterman score: 4034; 92.6% identity (92.8% similar) in 664 aa overlap (1-664:1-616)

               10        20        30        40        50        60
pF1KB3 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSGVRGLSRLLSARRLALAKAWPTVLQTGTRGFHFTVDGNKRASAKVSDSISAQYPVVDH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB3 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWR
       ::::::::::::::::::::::::::::::::::::::::::::                
NP_001 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQ----------------
               70        80        90       100                    

              130       140       150       160       170       180
pF1KB3 WHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKF
                                       ::::::::::::::::::::::::::::
NP_001 --------------------------------LENYGMPFSRTEDGKIYQRAFGGQSLKF
                                          110       120       130  

              190       200       210       220       230       240
pF1KB3 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE
            140       150       160       170       180       190  

              250       260       270       280       290       300
pF1KB3 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI
            200       210       220       230       240       250  

              310       320       330       340       350       360
pF1KB3 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE
            260       270       280       290       300       310  

              370       380       390       400       410       420
pF1KB3 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQ
            320       330       340       350       360       370  

              430       440       450       460       470       480
pF1KB3 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK
            380       390       400       410       420       430  

              490       500       510       520       530       540
pF1KB3 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKIS
            440       450       460       470       480       490  

              550       560       570       580       590       600
pF1KB3 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVR
            500       510       520       530       540       550  

              610       620       630       640       650       660
pF1KB3 IDEYDYSKPIQGQQKKPFEEHWRKHTLSFVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
       ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_001 IDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLNEADCATVPPA
            560       570       580       590       600       610  

           
pF1KB3 IRSY
       ::::
NP_001 IRSY
           




664 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 07:06:55 2016 done: Sat Nov  5 07:06:57 2016
 Total Scan time: 10.840 Total Display time:  0.090

Function used was FASTA [36.3.4 Apr, 2011]
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