FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3514, 245 aa 1>>>pF1KE3514 245 - 245 aa - 245 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4780+/-0.000886; mu= 11.1763+/- 0.053 mean_var=184.3786+/-40.149, 0's: 0 Z-trim(112.6): 105 B-trim: 4 in 1/50 Lambda= 0.094454 statistics sampled from 13220 (13336) to 13220 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.77), E-opt: 0.2 (0.41), width: 16 Scan time: 2.230 The best scores are: opt bits E(32554) CCDS58405.1 RNF151 gene_id:146310|Hs108|chr16 ( 245) 1751 250.2 9.3e-67 >>CCDS58405.1 RNF151 gene_id:146310|Hs108|chr16 (245 aa) initn: 1751 init1: 1751 opt: 1751 Z-score: 1312.0 bits: 250.2 E(32554): 9.3e-67 Smith-Waterman score: 1751; 100.0% identity (100.0% similar) in 245 aa overlap (1-245:1-245) 10 20 30 40 50 60 pF1KE3 MGGGYDLNLFASPPDSNFVCSVCHGVLKRPARLPCSHIFCKKCILRWLARQKTCPCCRKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MGGGYDLNLFASPPDSNFVCSVCHGVLKRPARLPCSHIFCKKCILRWLARQKTCPCCRKE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 VKRKKVVHMNKLRKTIGRLEVKCKNADAGCIVTCPLAHRKGHQDSCPFELTACPNEGCTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 VKRKKVVHMNKLRKTIGRLEVKCKNADAGCIVTCPLAHRKGHQDSCPFELTACPNEGCTS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 QVPRGTLAEHRQHCQQGSQQRCPLGCGATLDPAERARHNCYRELHNAWSVRQERRRPLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 QVPRGTLAEHRQHCQQGSQQRCPLGCGATLDPAERARHNCYRELHNAWSVRQERRRPLLL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 SLLRRVRWLDQATSVVRRELAELSNFLEEDTALLEGAPQEEAEAAPEGNVGAEVVGEPRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 SLLRRVRWLDQATSVVRRELAELSNFLEEDTALLEGAPQEEAEAAPEGNVGAEVVGEPRA 190 200 210 220 230 240 pF1KE3 NIPCK ::::: CCDS58 NIPCK 245 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 22:33:59 2016 done: Sat Nov 5 22:33:59 2016 Total Scan time: 2.230 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]