(Linear) (Six-base) MAPSORT of: KIBB4038.seq Check: 1663 from: 1 to: 1089 KIBB4038.orf With 182 enzymes: SgfI * April 24, 2009 13:02 .. AccI GT'mk_AC Cuts at: 0 629 1089 Size: 629 460 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 30 1089 Size: 30 1059 AlwNI CAG_nnn'CTG Cuts at: 0 882 1089 Size: 882 207 ApaI G_GGCC'C Cuts at: 0 245 1089 Size: 245 844 ApoI r'AATT_y Cuts at: 0 204 1089 Size: 204 885 BanI G'GyrC_C Cuts at: 0 892 1089 Size: 892 197 BanII G_rGCy'C Cuts at: 0 156 245 302 1089 Size: 156 89 57 787 Fragments arranged by size: 787 156 89 57 BbsI GAAGACnn'nnnn_ Cuts at: 0 905 1071 1089 Size: 905 166 18 Fragments arranged by size: 905 166 18 BbvCI CC'TCA_GC Cuts at: 0 659 1089 Size: 659 430 BglII A'GATC_T Cuts at: 0 779 950 1089 Size: 779 171 139 Fragments arranged by size: 779 171 139 Bme1580I G_kGCm'C Cuts at: 0 245 1089 Size: 245 844 BmrI ACTGGGnnnn_n' Cuts at: 0 666 1089 Size: 666 423 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 316 1089 Size: 316 773 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 483 655 760 859 1006 1089 Size: 483 172 105 99 147 83 Fragments arranged by size: 483 172 147 105 99 83 Bpu10I CC'TnA_GC Cuts at: 0 467 659 1089 Size: 467 192 430 Fragments arranged by size: 467 430 192 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 345 1089 Size: 345 744 BsaI GGTCTCn'nnnn_ Cuts at: 0 661 1089 Size: 661 428 BsaWI w'CCGG_w Cuts at: 0 1082 1089 Size: 1082 7 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 512 542 928 958 1089 Size: 512 30 386 30 131 Fragments arranged by size: 512 386 131 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 61 310 949 1089 Size: 61 249 639 140 Fragments arranged by size: 639 249 140 61 BseYI C'CCAG_C Cuts at: 0 488 564 1089 Size: 488 76 525 Fragments arranged by size: 525 488 76 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 527 1089 Size: 527 562 BsiHKAI G_wGCw'C Cuts at: 0 302 392 1089 Size: 302 90 697 Fragments arranged by size: 697 302 90 Bsp1286I G_dGCh'C Cuts at: 0 156 245 302 392 1089 Size: 156 89 57 90 697 Fragments arranged by size: 697 156 90 89 57 BspHI T'CATG_A Cuts at: 0 302 1089 Size: 302 787 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 19 193 663 1089 Size: 19 174 470 426 Fragments arranged by size: 470 426 174 19 BsrFI r'CCGG_y Cuts at: 0 1049 1089 Size: 1049 40 BssSI C'ACGA_G Cuts at: 0 437 1089 Size: 437 652 BstEII G'GTnAC_C Cuts at: 0 1002 1089 Size: 1002 87 BstYI r'GATC_y Cuts at: 0 779 950 1089 Size: 779 171 139 Fragments arranged by size: 779 171 139 Bsu36I CC'TnA_GG Cuts at: 0 44 1089 Size: 44 1045 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 129 164 1089 Size: 129 35 925 Fragments arranged by size: 925 129 35 DrdI GACnn_nn'nnGTC Cuts at: 0 697 1089 Size: 697 392 EaeI y'GGCC_r Cuts at: 0 170 402 597 644 993 1089 Size: 170 232 195 47 349 96 Fragments arranged by size: 349 232 195 170 96 47 EarI CTCTTCn'nnn_ Cuts at: 0 374 540 1089 Size: 374 166 549 Fragments arranged by size: 549 374 166 EcoICRI GAG'CTC Cuts at: 0 300 1089 Size: 300 789 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 483 655 760 859 1006 1089 Size: 483 172 105 99 147 83 Fragments arranged by size: 483 172 147 105 99 83 EcoO109I rG'GnC_Cy Cuts at: 0 51 242 713 1089 Size: 51 191 471 376 Fragments arranged by size: 471 376 191 51 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 318 350 477 509 658 690 771 803 Size: 318 32 127 32 149 32 81 32 Cuts at: 803 1089 Size: 286 Fragments arranged by size: 318 286 149 127 81 32 32 32 32 HincII GTy'rAC Cuts at: 0 801 1089 Size: 801 288 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 113 1089 Size: 113 976 MscI TGG'CCA Cuts at: 0 404 599 646 995 1089 Size: 404 195 47 349 94 Fragments arranged by size: 404 349 195 94 47 MslI CAynn'nnrTG Cuts at: 0 307 1089 Size: 307 782 MspA1I CmG'CkG Cuts at: 0 771 1089 Size: 771 318 NaeI GCC'GGC Cuts at: 0 1051 1089 Size: 1051 38 NgoMIV G'CCGG_C Cuts at: 0 1049 1089 Size: 1049 40 NspI r_CATG'y Cuts at: 0 1078 1089 Size: 1078 11 PasI CC'CwG_GG Cuts at: 0 63 94 1089 Size: 63 31 995 Fragments arranged by size: 995 63 31 PflMI CCAn_nnn'nTGG Cuts at: 0 882 1089 Size: 882 207 PpuMI rG'GwC_Cy Cuts at: 0 51 1089 Size: 51 1038 PspOMI G'GGCC_C Cuts at: 0 241 1089 Size: 241 848 PvuII CAG'CTG Cuts at: 0 771 1089 Size: 771 318 SacI G_AGCT'C Cuts at: 0 302 1089 Size: 302 787 SapI GCTCTTCn'nnn_ Cuts at: 0 374 1089 Size: 374 715 SexAI A'CCwGG_T Cuts at: 0 881 1089 Size: 881 208 SfcI C'TryA_G Cuts at: 0 278 1089 Size: 278 811 SmlI C'TyrA_G Cuts at: 0 324 1089 Size: 324 765 StuI AGG'CCT Cuts at: 0 82 478 755 1089 Size: 82 396 277 334 Fragments arranged by size: 396 334 277 82 StyI C'CwwG_G Cuts at: 0 399 1089 Size: 399 690 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 537 981 1089 Size: 537 444 108 Fragments arranged by size: 537 444 108 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 512 543 544 575 928 960 1089 Size: 512 31 1 31 353 32 129 Fragments arranged by size: 512 353 129 32 31 31 1 Tth111I GACn'n_nGTC Cuts at: 0 672 1089 Size: 672 417 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 235 1089 Size: 235 854 Enzymes that do cut: AccI AlfI AlwNI ApaI ApoI BanI BanII BbsI BbvCI BglII Bme1580I BmrI BplI BpmI Bpu10I BpuEI BsaI BsaWI BsaXI BseRI BseYI BsgI BsiHKAI Bsp1286I BspHI BspMI BsrFI BssSI BstEII BstYI Bsu36I CspCI DrdI EaeI EarI EcoICRI Eco57MI EcoO109I Hin4I HincII MmeI MscI MslI MspA1I NaeI NgoMIV NspI PasI PflMI PpuMI PspOMI PvuII SacI SapI SexAI SfcI SmlI StuI StyI TaqII TstI Tth111I XcmI Enzymes that do not cut: AarI AatII Acc65I AclI AcuI AfeI AflII AflIII AgeI AhdI AleI AloI ApaLI AscI AseI AsiSI AvaI AvrII BaeI BamHI BbeI BcgI BciVI BclI BfrBI BglI BlpI BmgBI BmtI BsaAI BsaBI BsaHI BsiEI BsiWI BsmI BsmBI BspEI BsrBI BsrDI BsrGI BssHII BstAPI BstBI BstXI BstZ17I BtgI BtgZI BtsI ClaI DraI DraIII EagI EciI EcoNI EcoRI EcoRV FalI FseI FspI FspAI HaeII HindIII HpaI KasI KpnI MfeI MluI NarI NcoI NdeI NheI NotI NruI NsiI PacI PciI PfoI PmeI PmlI PpiI PshAI PsiI PspXI PsrI PstI PvuI RsrII SacII SalI SanDI SbfI ScaI SfiI SfoI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI SspI SwaI TatI XbaI XhoI XmaI XmnI ZraI