FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3436, 929 aa 1>>>pF1KE3436 929 - 929 aa - 929 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.7809+/-0.00118; mu= -0.4872+/- 0.071 mean_var=194.5927+/-41.871, 0's: 0 Z-trim(106.8): 50 B-trim: 0 in 0/51 Lambda= 0.091941 statistics sampled from 9175 (9198) to 9175 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.633), E-opt: 0.2 (0.283), width: 16 Scan time: 4.520 The best scores are: opt bits E(32554) CCDS9076.1 SCYL2 gene_id:55681|Hs108|chr12 ( 929) 6104 823.2 0 CCDS81726.1 SCYL2 gene_id:55681|Hs108|chr12 ( 933) 6086 820.8 0 >>CCDS9076.1 SCYL2 gene_id:55681|Hs108|chr12 (929 aa) initn: 6104 init1: 6104 opt: 6104 Z-score: 4388.0 bits: 823.2 E(32554): 0 Smith-Waterman score: 6104; 100.0% identity (100.0% similar) in 929 aa overlap (1-929:1-929) 10 20 30 40 50 60 pF1KE3 MESMLNKLKSTVTKVTADVTSAVMGNPVTREFDVGRHIASGGNGLAWKIFNGTKKSTKQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 MESMLNKLKSTVTKVTADVTSAVMGNPVTREFDVGRHIASGGNGLAWKIFNGTKKSTKQE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 VAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 VAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 PVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQVSEGLSFLHSSVKMVHGNIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 PVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQVSEGLSFLHSSVKMVHGNIT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 PENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPNPEYLAPEYILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 PENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPNPEYLAPEYILS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 VSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLGSSSLTNIPEEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 VSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLGSSSLTNIPEEV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 REHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQKSQFFKGLPKVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 REHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQKSQFFKGLPKVL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 PKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLILPELGPVFKQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 PKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLILPELGPVFKQQ 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 EPIQILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQELCLNIIPTFANLID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 EPIQILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQELCLNIIPTFANLID 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 YPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVLDDILPFLQQIPSKEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 YPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVLDDILPFLQQIPSKEP 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 AVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNLNQFNSFISVIKEMLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 AVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNLNQFNSFISVIKEMLN 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 RLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQIDKVFNNIGADLLTGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 RLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQIDKVFNNIGADLLTGS 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 ESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 ESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLT 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE3 DTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNANMGFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 DTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNANMGFQ 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE3 TSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTDMSAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 TSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTDMSAL 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE3 NNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGMQGNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS90 NNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGMQGNP 850 860 870 880 890 900 910 920 pF1KE3 FFNPQNFAQPPTTMTNSSSASNDLKDLFG ::::::::::::::::::::::::::::: CCDS90 FFNPQNFAQPPTTMTNSSSASNDLKDLFG 910 920 >>CCDS81726.1 SCYL2 gene_id:55681|Hs108|chr12 (933 aa) initn: 6090 init1: 3281 opt: 6086 Z-score: 4375.1 bits: 820.8 E(32554): 0 Smith-Waterman score: 6086; 99.6% identity (99.6% similar) in 933 aa overlap (1-929:1-933) 10 20 30 40 50 60 pF1KE3 MESMLNKLKSTVTKVTADVTSAVMGNPVTREFDVGRHIASGGNGLAWKIFNGTKKSTKQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MESMLNKLKSTVTKVTADVTSAVMGNPVTREFDVGRHIASGGNGLAWKIFNGTKKSTKQE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 VAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 VAVFVFDKKLIDKYQKFEKDQIIDSLKRGVQQLTRLRHPRLLTVQHPLEESRDCLAFCTE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 PVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQVSEGLSFLHSSVKMVHGNIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 PVFASLANVLGNWENLPSPISPDIKDYKLYDVETKYGLLQVSEGLSFLHSSVKMVHGNIT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 PENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPNPEYLAPEYILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 PENIILNKSGAWKIMGFDFCVSSTNPSEQEPKFPCKEWDPNLPSLCLPNPEYLAPEYILS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 VSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLGSSSLTNIPEEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 VSCETASDMYSLGTVMYAVFNKGKPIFEVNKQDIYKSFSRQLDQLSRLGSSSLTNIPEEV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 REHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQKSQFFKGLPKVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 REHVKLLLNVTPTVRPDADQMTKIPFFDDVGAVTLQYFDTLFQRDNLQKSQFFKGLPKVL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 PKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLILPELGPVFKQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 PKLPKRVIVQRILPCLTSEFVNPDMVPFVLPNVLLIAEECTKEEYVKLILPELGPVFKQQ 370 380 390 400 410 420 430 440 450 460 470 pF1KE3 EPIQ----ILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQELCLNIIPTFA :::: :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 EPIQASNMILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQELCLNIIPTFA 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE3 NLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVLDDILPFLQQIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 NLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVLDDILPFLQQIP 490 500 510 520 530 540 540 550 560 570 580 590 pF1KE3 SKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNLNQFNSFISVIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 SKEPAVLMGILGIYKCTFTHKKLGITKEQLAGKVLPHLIPLSIENNLNLNQFNSFISVIK 550 560 570 580 590 600 600 610 620 630 640 650 pF1KE3 EMLNRLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQIDKVFNNIGADL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 EMLNRLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVTNIGNQQIDKVFNNIGADL 610 620 630 640 650 660 660 670 680 690 700 710 pF1KE3 LTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 LTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQT 670 680 690 700 710 720 720 730 740 750 760 770 pF1KE3 KDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 KDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMFSTPTDNTKRNLTNGLNAN 730 740 750 760 770 780 780 790 800 810 820 830 pF1KE3 MGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPNFNALSVPPAGAKQTQQRPTD 790 800 810 820 830 840 840 850 860 870 880 890 pF1KE3 MSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGSPTMGSSVMGTQMNVIGQSAFGM 850 860 870 880 890 900 900 910 920 pF1KE3 QGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG ::::::::::::::::::::::::::::::::: CCDS81 QGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG 910 920 930 929 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:33:02 2016 done: Sat Nov 5 23:33:03 2016 Total Scan time: 4.520 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]