FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0944, 343 aa 1>>>pF1KE0944 343 - 343 aa - 343 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.1863+/-0.00106; mu= -9.0788+/- 0.061 mean_var=293.7399+/-66.956, 0's: 0 Z-trim(109.9): 358 B-trim: 0 in 0/53 Lambda= 0.074833 statistics sampled from 10758 (11185) to 10758 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.707), E-opt: 0.2 (0.344), width: 16 Scan time: 2.860 The best scores are: opt bits E(32554) CCDS1683.1 TRIB2 gene_id:28951|Hs108|chr2 ( 343) 2306 262.7 3.1e-70 CCDS6357.1 TRIB1 gene_id:10221|Hs108|chr8 ( 372) 1266 150.5 2.1e-36 CCDS64971.1 TRIB1 gene_id:10221|Hs108|chr8 ( 206) 987 120.2 1.5e-27 CCDS12997.1 TRIB3 gene_id:57761|Hs108|chr20 ( 358) 979 119.5 4.3e-27 CCDS77554.1 TRIB3 gene_id:57761|Hs108|chr20 ( 385) 979 119.5 4.5e-27 >>CCDS1683.1 TRIB2 gene_id:28951|Hs108|chr2 (343 aa) initn: 2306 init1: 2306 opt: 2306 Z-score: 1374.4 bits: 262.7 E(32554): 3.1e-70 Smith-Waterman score: 2306; 100.0% identity (100.0% similar) in 343 aa overlap (1-343:1-343) 10 20 30 40 50 60 pF1KE0 MNIHRSTPITIARYGRSRNKTQDFEELSSIRSAEPSQSFSPNLGSPSPPETPNLSHCVSC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 MNIHRSTPITIARYGRSRNKTQDFEELSSIRSAEPSQSFSPNLGSPSPPETPNLSHCVSC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 IGKYLLLEPLEGDHVFRAVHLHSGEELVCKVFDISCYQESLAPCFCLSAHSNINQITEII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 IGKYLLLEPLEGDHVFRAVHLHSGEELVCKVFDISCYQESLAPCFCLSAHSNINQITEII 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 LGETKAYVFFERSYGDMHSFVRTCKKLREEEAARLFYQIASAVAHCHDGGLVLRDLKLRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 LGETKAYVFFERSYGDMHSFVRTCKKLREEEAARLFYQIASAVAHCHDGGLVLRDLKLRK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 FIFKDEERTRVKLESLEDAYILRGDDDSLSDKHGCPAYVSPEILNTSGSYSGKAADVWSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 FIFKDEERTRVKLESLEDAYILRGDDDSLSDKHGCPAYVSPEILNTSGSYSGKAADVWSL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 GVMLYTMLVGRYPFHDIEPSSLFSKIRRGQFNIPETLSPKAKCLIRSILRREPSERLTSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 GVMLYTMLVGRYPFHDIEPSSLFSKIRRGQFNIPETLSPKAKCLIRSILRREPSERLTSQ 250 260 270 280 290 300 310 320 330 340 pF1KE0 EILDHPWFSTDFSVSNSAYGAKEVSDQLVPDVNMEENLDPFFN ::::::::::::::::::::::::::::::::::::::::::: CCDS16 EILDHPWFSTDFSVSNSAYGAKEVSDQLVPDVNMEENLDPFFN 310 320 330 340 >>CCDS6357.1 TRIB1 gene_id:10221|Hs108|chr8 (372 aa) initn: 1283 init1: 1215 opt: 1266 Z-score: 767.1 bits: 150.5 E(32554): 2.1e-36 Smith-Waterman score: 1275; 61.9% identity (81.2% similar) in 320 aa overlap (35-342:56-371) 10 20 30 40 50 pF1KE0 RSTPITIARYGRSRNKTQDFEELSSIRSAEPSQSFSPNLGSPSPPETPNLSHCV------ : . .:: ::: :. : . . CCDS63 TRGVPAKRLLDADDAAAVAAKCPRLSECSSPPDYLSPP-GSPCSPQPPPAAPGAGGGSGS 30 40 50 60 70 80 60 70 80 90 100 110 pF1KE0 ----SCIGKYLLLEPLEGDHVFRAVHLHSGEELVCKVFDISCYQESLAPCFCLSAHSNIN : :. :::: : .:: ::. .:.:.:: :::: :. ::... : . : .::::. CCDS63 APGPSRIADYLLLPLAEREHVSRALCIHTGRELRCKVFPIKHYQDKIRPYIQLPSHSNIT 90 100 110 120 130 140 120 130 140 150 160 170 pF1KE0 QITEIILGETKAYVFFERSYGDMHSFVRTCKKLREEEAARLFYQIASAVAHCHDGGLVLR :.:.::::::::::::...:::::.::. :.:::::::::: ::.:::::::....:: CCDS63 GIVEVILGETKAYVFFEKDFGDMHSYVRSRKRLREEEAARLFKQIVSAVAHCHQSAIVLG 150 160 170 180 190 200 180 190 200 210 220 230 pF1KE0 DLKLRKFIFKDEERTRVKLESLEDAYILRGDDDSLSDKHGCPAYVSPEILNTSGSYSGKA :::::::.:. ::::...::::::..:..:.::.::::::::::::::::::.:.::::: CCDS63 DLKLRKFVFSTEERTQLRLESLEDTHIMKGEDDALSDKHGCPAYVSPEILNTTGTYSGKA 210 220 230 240 250 260 240 250 260 270 280 290 pF1KE0 ADVWSLGVMLYTMLVGRYPFHDIEPSSLFSKIRRGQFNIPETLSPKAKCLIRSILRREPS ::::::::::::.::::::::: .::.:::::::::: ::: .::::.:::::.:::::: CCDS63 ADVWSLGVMLYTLLVGRYPFHDSDPSALFSKIRRGQFCIPEHISPKARCLIRSLLRREPS 270 280 290 300 310 320 300 310 320 330 340 pF1KE0 ERLTSQEILDHPWFSTDFSVSNSAYGAKEV--SDQLVPDVNMEENLDPFFN ::::. ::: :::: :: . .: .:. :::.::. . . ... :: CCDS63 ERLTAPEILLHPWFE---SVLEPGYIDSEIGTSDQIVPEYQEDSDISSFFC 330 340 350 360 370 >>CCDS64971.1 TRIB1 gene_id:10221|Hs108|chr8 (206 aa) initn: 1009 init1: 945 opt: 987 Z-score: 607.8 bits: 120.2 E(32554): 1.5e-27 Smith-Waterman score: 987; 70.2% identity (88.9% similar) in 208 aa overlap (137-342:1-205) 110 120 130 140 150 160 pF1KE0 LSAHSNINQITEIILGETKAYVFFERSYGDMHSFVRTCKKLREEEAARLFYQIASAVAHC :::.::. :.:::::::::: ::.:::::: CCDS64 MHSYVRSRKRLREEEAARLFKQIVSAVAHC 10 20 30 170 180 190 200 210 220 pF1KE0 HDGGLVLRDLKLRKFIFKDEERTRVKLESLEDAYILRGDDDSLSDKHGCPAYVSPEILNT :....:: :::::::.:. ::::...::::::..:..:.::.:::::::::::::::::: CCDS64 HQSAIVLGDLKLRKFVFSTEERTQLRLESLEDTHIMKGEDDALSDKHGCPAYVSPEILNT 40 50 60 70 80 90 230 240 250 260 270 280 pF1KE0 SGSYSGKAADVWSLGVMLYTMLVGRYPFHDIEPSSLFSKIRRGQFNIPETLSPKAKCLIR .:.:::::::::::::::::.::::::::: .::.:::::::::: ::: .::::.:::: CCDS64 TGTYSGKAADVWSLGVMLYTLLVGRYPFHDSDPSALFSKIRRGQFCIPEHISPKARCLIR 100 110 120 130 140 150 290 300 310 320 330 340 pF1KE0 SILRREPSERLTSQEILDHPWFSTDFSVSNSAYGAKEV--SDQLVPDVNMEENLDPFFN :.::::::::::. ::: :::: :: . .: .:. :::.::. . . ... :: CCDS64 SLLRREPSERLTAPEILLHPWFE---SVLEPGYIDSEIGTSDQIVPEYQEDSDISSFFC 160 170 180 190 200 >>CCDS12997.1 TRIB3 gene_id:57761|Hs108|chr20 (358 aa) initn: 947 init1: 947 opt: 979 Z-score: 599.9 bits: 119.5 E(32554): 4.3e-27 Smith-Waterman score: 993; 46.9% identity (70.0% similar) in 337 aa overlap (5-331:2-338) 10 20 30 40 50 pF1KE0 MNIHRSTPITIARYGRSRNKTQDFEE-LSSIRSAE------PSQSFSPNLGSPSPPETPN :.::.. . ::.: .... :.. : .. :. . : : ::: .:. CCDS12 MRATPLAAPAGSLSRKKRLELDDNLDTERPVQKRARSGPQPRLPPCLLPLSPPTAPD 10 20 30 40 50 60 70 80 90 100 110 pF1KE0 LSHCV---SCIGKYLLLEPLEGDHVFRAVHLHSGEELVCKVFDISCYQESLAPCFCLSAH . : : .: :.:::: :: ....:.: .: : .:::. .. : : : : CCDS12 RATAVATASRLGPYVLLEPEEGGRAYQALHCPTGTEYTCKVYPVQEALAVLEPYARLPPH 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE0 SNINQITEIILGETKAYVFFERSYGDMHSFVRTCKKLREEEAARLFYQIASAVAHCHDGG ... . ::.. : :.:: :..:::::.::. ... : ::: :: :.:.:.::::. : CCDS12 KHVARPTEVLAGTQLLYAFFTRTHGDMHSLVRSRHRIPEPEAAVLFRQMATALAHCHQHG 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE0 LVLRDLKLRKFIFKDEERTRVKLESLEDAYILRGDDDSLSDKHGCPAYVSPEILNTSGSY :::::::: .:.: :.:: .. ::.:::. .: : :::: :::.:::::.::::.. .:: CCDS12 LVLRDLKLCRFVFADRERKKLVLENLEDSCVLTGPDDSLWDKHACPAYVGPEILSSRASY 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE0 SGKAADVWSLGVMLYTMLVGRYPFHDIEPSSLFSKIRRGQFNIPETLSPKAKCLIRSILR :::::::::::: :.:::.:.:::.: :: ::.::::: . .: :: :.::.: .:: CCDS12 SGKAADVWSLGVALFTMLAGHYPFQDSEPVLLFGKIRRGAYALPAGLSAPARCLVRCLLR 240 250 260 270 280 290 300 310 320 330 340 pF1KE0 REPSERLTSQEILDHPWFSTDFSVSNSAYGAKEVSDQLVPDVNMEENLDPFFN :::.::::. :: :::. : . . . :.::: CCDS12 REPAERLTATGILLHPWLRQDPMPLAPTRSHLWEAAQVVPDGLGLDEAREEEGDREVVLY 300 310 320 330 340 350 CCDS12 G >>CCDS77554.1 TRIB3 gene_id:57761|Hs108|chr20 (385 aa) initn: 947 init1: 947 opt: 979 Z-score: 599.5 bits: 119.5 E(32554): 4.5e-27 Smith-Waterman score: 993; 46.9% identity (70.0% similar) in 337 aa overlap (5-331:29-365) 10 20 30 pF1KE0 MNIHRSTPITIARYGRSRNKTQDFEE-LSSIRSAE- :.::.. . ::.: .... :.. : .. CCDS77 MVLMHLAVKNNRMSANNDHFLTPTWQQMRATPLAAPAGSLSRKKRLELDDNLDTERPVQK 10 20 30 40 50 60 40 50 60 70 80 pF1KE0 -----PSQSFSPNLGSPSPPETPNLSHCV---SCIGKYLLLEPLEGDHVFRAVHLHSGEE :. . : : ::: .:. . : : .: :.:::: :: ....:.: .: : CCDS77 RARSGPQPRLPPCLLPLSPPTAPDRATAVATASRLGPYVLLEPEEGGRAYQALHCPTGTE 70 80 90 100 110 120 90 100 110 120 130 140 pF1KE0 LVCKVFDISCYQESLAPCFCLSAHSNINQITEIILGETKAYVFFERSYGDMHSFVRTCKK .:::. .. : : : :... . ::.. : :.:: :..:::::.::. .. CCDS77 YTCKVYPVQEALAVLEPYARLPPHKHVARPTEVLAGTQLLYAFFTRTHGDMHSLVRSRHR 130 140 150 160 170 180 150 160 170 180 190 200 pF1KE0 LREEEAARLFYQIASAVAHCHDGGLVLRDLKLRKFIFKDEERTRVKLESLEDAYILRGDD . : ::: :: :.:.:.::::. ::::::::: .:.: :.:: .. ::.:::. .: : : CCDS77 IPEPEAAVLFRQMATALAHCHQHGLVLRDLKLCRFVFADRERKKLVLENLEDSCVLTGPD 190 200 210 220 230 240 210 220 230 240 250 260 pF1KE0 DSLSDKHGCPAYVSPEILNTSGSYSGKAADVWSLGVMLYTMLVGRYPFHDIEPSSLFSKI ::: :::.:::::.::::.. .:::::::::::::: :.:::.:.:::.: :: ::.:: CCDS77 DSLWDKHACPAYVGPEILSSRASYSGKAADVWSLGVALFTMLAGHYPFQDSEPVLLFGKI 250 260 270 280 290 300 270 280 290 300 310 320 pF1KE0 RRGQFNIPETLSPKAKCLIRSILRREPSERLTSQEILDHPWFSTDFSVSNSAYGAKEVSD ::: . .: :: :.::.: .:::::.::::. :: :::. : . . . CCDS77 RRGAYALPAGLSAPARCLVRCLLRREPAERLTATGILLHPWLRQDPMPLAPTRSHLWEAA 310 320 330 340 350 360 330 340 pF1KE0 QLVPDVNMEENLDPFFN :.::: CCDS77 QVVPDGLGLDEAREEEGDREVVLYG 370 380 343 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 04:38:47 2016 done: Sat Nov 5 04:38:48 2016 Total Scan time: 2.860 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]