Result of FASTA (ccds) for
pFN21AE0930
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0930, 385 aa
1>>>pF1KE0930 385 - 385 aa - 385 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2282+/-0.000789; mu= 13.0596+/- 0.048
mean_var=93.2304+/-18.616, 0's: 0 Z-trim(109.4): 17 B-trim: 0 in 0/49
Lambda= 0.132830
statistics sampled from 10846 (10862) to 10846 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.334), width: 16
Scan time: 2.800
The best scores are: opt bits E(32554)
CCDS54650.1 TFDP2 gene_id:7029|Hs108|chr3 ( 446) 2502 489.5 2.5e-138
CCDS54648.1 TFDP2 gene_id:7029|Hs108|chr3 ( 418) 2495 488.1 6e-138
CCDS43159.1 TFDP2 gene_id:7029|Hs108|chr3 ( 386) 2490 487.2 1.1e-137
CCDS54649.1 TFDP2 gene_id:7029|Hs108|chr3 ( 349) 2226 436.5 1.7e-122
CCDS54647.1 TFDP2 gene_id:7029|Hs108|chr3 ( 310) 2006 394.3 7.6e-110
CCDS9538.1 TFDP1 gene_id:7027|Hs108|chr13 ( 410) 1334 265.6 5.6e-71
CCDS14636.2 TFDP3 gene_id:51270|Hs108|chrX ( 405) 1011 203.7 2.4e-52
>>CCDS54650.1 TFDP2 gene_id:7029|Hs108|chr3 (446 aa)
initn: 2502 init1: 2502 opt: 2502 Z-score: 2596.9 bits: 489.5 E(32554): 2.5e-138
Smith-Waterman score: 2502; 100.0% identity (100.0% similar) in 385 aa overlap (1-385:62-446)
10 20 30
pF1KE0 MIISTPQRLTSSGSVLIGSPYTPAPAMVTQ
::::::::::::::::::::::::::::::
CCDS54 FVAFPVSNTNSPTKILPKTLGPINVNVGPQMIISTPQRLTSSGSVLIGSPYTPAPAMVTQ
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE0 THIAEATGWVPGDRKRARKFIDSDFSESKRSKKGDKNGKGLRHFSMKVCEKVQRKGTTSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 THIAEATGWVPGDRKRARKFIDSDFSESKRSKKGDKNGKGLRHFSMKVCEKVQRKGTTSY
100 110 120 130 140 150
100 110 120 130 140 150
pF1KE0 NEVADELVSEFTNSNNHLAADSAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NEVADELVSEFTNSNNHLAADSAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPT
160 170 180 190 200 210
160 170 180 190 200 210
pF1KE0 NSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQNQGPPALNST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQNQGPPALNST
220 230 240 250 260 270
220 230 240 250 260 270
pF1KE0 IQLPFIIINTSRKTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IQLPFIIINTSRKTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCSL
280 290 300 310 320 330
280 290 300 310 320 330
pF1KE0 EDLKLAKSLVPKALEGYITDISTGPSWLNQGLLLNSTQSVSNLDLTTGATLPQSSVNQGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EDLKLAKSLVPKALEGYITDISTGPSWLNQGLLLNSTQSVSNLDLTTGATLPQSSVNQGL
340 350 360 370 380 390
340 350 360 370 380
pF1KE0 CLDAEVALATGQFLAPNSHQSSSAASHCSESRGETPCSFNDEDEEDDEEDSSSPE
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 CLDAEVALATGQFLAPNSHQSSSAASHCSESRGETPCSFNDEDEEDDEEDSSSPE
400 410 420 430 440
>>CCDS54648.1 TFDP2 gene_id:7029|Hs108|chr3 (418 aa)
initn: 2495 init1: 2495 opt: 2495 Z-score: 2590.1 bits: 488.1 E(32554): 6e-138
Smith-Waterman score: 2495; 100.0% identity (100.0% similar) in 384 aa overlap (2-385:35-418)
10 20 30
pF1KE0 MIISTPQRLTSSGSVLIGSPYTPAPAMVTQT
::::::::::::::::::::::::::::::
CCDS54 GIIFEAENKPSPGTESAGTFILDLSATSRTIISTPQRLTSSGSVLIGSPYTPAPAMVTQT
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE0 HIAEATGWVPGDRKRARKFIDSDFSESKRSKKGDKNGKGLRHFSMKVCEKVQRKGTTSYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 HIAEATGWVPGDRKRARKFIDSDFSESKRSKKGDKNGKGLRHFSMKVCEKVQRKGTTSYN
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE0 EVADELVSEFTNSNNHLAADSAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EVADELVSEFTNSNNHLAADSAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTN
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE0 SAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQNQGPPALNSTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQNQGPPALNSTI
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE0 QLPFIIINTSRKTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCSLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 QLPFIIINTSRKTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCSLE
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE0 DLKLAKSLVPKALEGYITDISTGPSWLNQGLLLNSTQSVSNLDLTTGATLPQSSVNQGLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DLKLAKSLVPKALEGYITDISTGPSWLNQGLLLNSTQSVSNLDLTTGATLPQSSVNQGLC
310 320 330 340 350 360
340 350 360 370 380
pF1KE0 LDAEVALATGQFLAPNSHQSSSAASHCSESRGETPCSFNDEDEEDDEEDSSSPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LDAEVALATGQFLAPNSHQSSSAASHCSESRGETPCSFNDEDEEDDEEDSSSPE
370 380 390 400 410
>>CCDS43159.1 TFDP2 gene_id:7029|Hs108|chr3 (386 aa)
initn: 1775 init1: 1775 opt: 2490 Z-score: 2585.4 bits: 487.2 E(32554): 1.1e-137
Smith-Waterman score: 2490; 99.7% identity (99.7% similar) in 386 aa overlap (1-385:1-386)
10 20 30 40 50 60
pF1KE0 MIISTPQRLTSSGSVLIGSPYTPAPAMVTQTHIAEATGWVPGDRKRARKFIDSDFSESKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MIISTPQRLTSSGSVLIGSPYTPAPAMVTQTHIAEATGWVPGDRKRARKFIDSDFSESKR
10 20 30 40 50 60
70 80 90 100 110
pF1KE0 SKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADS-AYDQKNI
:::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::
CCDS43 SKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADSQAYDQKNI
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 RRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 RRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQE
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 LLLQQIAFKNLVQRNRQNEQQNQGPPALNSTIQLPFIIINTSRKTVIDCSISSDKFEYLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LLLQQIAFKNLVQRNRQNEQQNQGPPALNSTIQLPFIIINTSRKTVIDCSISSDKFEYLF
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE0 NFDNTFEIHDDIEVLKRMGMSFGLESGKCSLEDLKLAKSLVPKALEGYITDISTGPSWLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 NFDNTFEIHDDIEVLKRMGMSFGLESGKCSLEDLKLAKSLVPKALEGYITDISTGPSWLN
250 260 270 280 290 300
300 310 320 330 340 350
pF1KE0 QGLLLNSTQSVSNLDLTTGATLPQSSVNQGLCLDAEVALATGQFLAPNSHQSSSAASHCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QGLLLNSTQSVSNLDLTTGATLPQSSVNQGLCLDAEVALATGQFLAPNSHQSSSAASHCS
310 320 330 340 350 360
360 370 380
pF1KE0 ESRGETPCSFNDEDEEDDEEDSSSPE
::::::::::::::::::::::::::
CCDS43 ESRGETPCSFNDEDEEDDEEDSSSPE
370 380
>>CCDS54649.1 TFDP2 gene_id:7029|Hs108|chr3 (349 aa)
initn: 2226 init1: 2226 opt: 2226 Z-score: 2312.7 bits: 436.5 E(32554): 1.7e-122
Smith-Waterman score: 2226; 100.0% identity (100.0% similar) in 343 aa overlap (43-385:7-349)
20 30 40 50 60 70
pF1KE0 GSVLIGSPYTPAPAMVTQTHIAEATGWVPGDRKRARKFIDSDFSESKRSKKGDKNGKGLR
::::::::::::::::::::::::::::::
CCDS54 MLDPKCDRKRARKFIDSDFSESKRSKKGDKNGKGLR
10 20 30
80 90 100 110 120 130
pF1KE0 HFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADSAYDQKNIRRRVYDALNVLMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 HFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADSAYDQKNIRRRVYDALNVLMA
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE0 MNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MNIISKEKKEIKWIGLPTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQ
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE0 RNRQNEQQNQGPPALNSTIQLPFIIINTSRKTVIDCSISSDKFEYLFNFDNTFEIHDDIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RNRQNEQQNQGPPALNSTIQLPFIIINTSRKTVIDCSISSDKFEYLFNFDNTFEIHDDIE
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE0 VLKRMGMSFGLESGKCSLEDLKLAKSLVPKALEGYITDISTGPSWLNQGLLLNSTQSVSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VLKRMGMSFGLESGKCSLEDLKLAKSLVPKALEGYITDISTGPSWLNQGLLLNSTQSVSN
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE0 LDLTTGATLPQSSVNQGLCLDAEVALATGQFLAPNSHQSSSAASHCSESRGETPCSFNDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LDLTTGATLPQSSVNQGLCLDAEVALATGQFLAPNSHQSSSAASHCSESRGETPCSFNDE
280 290 300 310 320 330
380
pF1KE0 DEEDDEEDSSSPE
:::::::::::::
CCDS54 DEEDDEEDSSSPE
340
>>CCDS54647.1 TFDP2 gene_id:7029|Hs108|chr3 (310 aa)
initn: 2006 init1: 2006 opt: 2006 Z-score: 2085.6 bits: 394.3 E(32554): 7.6e-110
Smith-Waterman score: 2006; 100.0% identity (100.0% similar) in 310 aa overlap (76-385:1-310)
50 60 70 80 90 100
pF1KE0 RARKFIDSDFSESKRSKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSN
::::::::::::::::::::::::::::::
CCDS54 MKVCEKVQRKGTTSYNEVADELVSEFTNSN
10 20 30
110 120 130 140 150 160
pF1KE0 NHLAADSAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NHLAADSAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLPTNSAQECQNLEIEKQR
40 50 60 70 80 90
170 180 190 200 210 220
pF1KE0 RIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQNQGPPALNSTIQLPFIIINTSRKTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQNQGPPALNSTIQLPFIIINTSRKTV
100 110 120 130 140 150
230 240 250 260 270 280
pF1KE0 IDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCSLEDLKLAKSLVPKALE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 IDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCSLEDLKLAKSLVPKALE
160 170 180 190 200 210
290 300 310 320 330 340
pF1KE0 GYITDISTGPSWLNQGLLLNSTQSVSNLDLTTGATLPQSSVNQGLCLDAEVALATGQFLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GYITDISTGPSWLNQGLLLNSTQSVSNLDLTTGATLPQSSVNQGLCLDAEVALATGQFLA
220 230 240 250 260 270
350 360 370 380
pF1KE0 PNSHQSSSAASHCSESRGETPCSFNDEDEEDDEEDSSSPE
::::::::::::::::::::::::::::::::::::::::
CCDS54 PNSHQSSSAASHCSESRGETPCSFNDEDEEDDEEDSSSPE
280 290 300 310
>>CCDS9538.1 TFDP1 gene_id:7027|Hs108|chr13 (410 aa)
initn: 1242 init1: 1028 opt: 1334 Z-score: 1387.8 bits: 265.6 E(32554): 5.6e-71
Smith-Waterman score: 1432; 60.9% identity (79.8% similar) in 386 aa overlap (1-385:62-408)
10 20 30
pF1KE0 MIISTPQRLTSSGSVLIGSPYTPAPAMVTQ
..:.:::: ..:.....:::.::. ...:
CCDS95 VAVHPSTVNPLGKQLLPKTFGQSNVNIAQQVVIGTPQRPAASNTLVVGSPHTPSTHFASQ
40 50 60 70 80 90
40 50 60 70 80 90
pF1KE0 THIAEATGWVPGDRKRARKFIDSDFSESKRSKKGDKNGKGLRHFSMKVCEKVQRKGTTSY
.. .... : : ::..::.:::::::::::::::::::::::::
CCDS95 NQPSDSSPWSAG----------------KRNRKGEKNGKGLRHFSMKVCEKVQRKGTTSY
100 110 120 130
100 110 120 130 140
pF1KE0 NEVADELVSEFTNSNNH-LAADSAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLP
::::::::.::. ..:: : .::::::::::::::::::::::::::::::::::::::
CCDS95 NEVADELVAEFSAADNHILPNESAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGLP
140 150 160 170 180 190
150 160 170 180 190 200
pF1KE0 TNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQNQGPPALNS
:::::::::::.:.:::.::::::..:::::.::::::::::::::. ::: . :: ::
CCDS95 TNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQQASRPPPPNS
200 210 220 230 240 250
210 220 230 240 250 260
pF1KE0 TIQLPFIIINTSRKTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKCS
.:.:::::.:::.:::::::::.:::::::::::::::::::::::::::. :::::.::
CCDS95 VIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDNTFEIHDDIEVLKRMGMACGLESGSCS
260 270 280 290 300 310
270 280 290 300 310 320
pF1KE0 LEDLKLAKSLVPKALEGYITDISTGPSWLNQGLLLNSTQSVSNLDLTTGATLPQSSVNQG
::::.:.:::::::: :.:... : :...... :.:: :. . :....:
CCDS95 AEDLKMARSLVPKALEPYVTEMAQGTV---GGVFITTAGSTSN-----GTRFSASDLTNG
320 330 340 350 360
330 340 350 360 370 380
pF1KE0 LCLDAEVALATGQFLAPNSHQSSSAASHCSESRGETPCSFNDEDEEDDEEDSSSPE
:. ::: :: .:. : :: ::: :. ::.:.:.. . . :
CCDS95 ----ADGMLAT-----------SSNGSQYSGSRVETPVSYVGEDDEEDDDFNENDEDD
370 380 390 400 410
>>CCDS14636.2 TFDP3 gene_id:51270|Hs108|chrX (405 aa)
initn: 1071 init1: 856 opt: 1011 Z-score: 1053.4 bits: 203.7 E(32554): 2.4e-52
Smith-Waterman score: 1074; 50.1% identity (74.8% similar) in 385 aa overlap (1-383:57-399)
10 20 30
pF1KE0 MIISTPQRLTSSGSVLIGSPYTPAPAMVTQ
..:. ::: ..:. ..::: :. ...:
CCDS14 VAVHTSTVNPLGKQLLPKTFGQSSVNIDQQVVIGMPQRPAASNIPVVGSPNPPSTHFASQ
30 40 50 60 70 80
40 50 60 70 80
pF1KE0 T-HIAEATGWVPGDRKRARKFIDSDFSESKRSKKGDKNGKGLRHFSMKVCEKVQRKGTTS
. : . :. .....::.::: :: ..:::: : ::::::::
CCDS14 NQHSYSSPPWA-----------------GQHNRKGEKNGMGLCRLSMKVWETVQRKGTTS
90 100 110 120
90 100 110 120 130 140
pF1KE0 YNEVADELVSEFTNSNNHLAAD-SAYDQKNIRRRVYDALNVLMAMNIISKEKKEIKWIGL
.::. :::..: ..:: . . :::: :::.::.::::::::::::::.:::.::::::
CCDS14 CQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMNIISREKKKIKWIGL
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE0 PTNSAQECQNLEIEKQRRIERIKQKRAQLQELLLQQIAFKNLVQRNRQNEQQNQGPPALN
:::::.::::..:.:.:.::::::...::.:.:::::::::: ::. :.: . : :
CCDS14 TTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRNQYVEEQVSQRPLPN
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE0 STIQLPFIIINTSRKTVIDCSISSDKFEYLFNFDNTFEIHDDIEVLKRMGMSFGLESGKC
:.:..:::::..:.::::.::::.:: ::::.:...:::::: ::: :::.::::::.:
CCDS14 SVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVLMWMGMTFGLESGSC
250 260 270 280 290 300
270 280 290 300 310 320
pF1KE0 SLEDLKLAKSLVPKALEGYITDISTGPSWLNQGLLLNSTQSVSNLDLTTGATLPQSSVNQ
: ::::.:..::::::: :.:... : . : ..... : :: :. : :....
CCDS14 SAEDLKMARNLVPKALEPYVTEMAQG----TFGGVFTTAGSRSN-----GTWLSASDLTN
310 320 330 340 350 360
330 340 350 360 370 380
pF1KE0 GLCLDAEVALATGQFLAPNSHQSSSAASHCSESRGETPCSFNDEDEEDDEEDSSSPE
.: :. :: .::..:. : :: ::: . ..:.:::...:. :
CCDS14 ---------IAIGM-LA-----TSSGGSQYSGSRVETP-AVEEEEEEDNNDDDLSENDED
370 380 390 400
CCDS14 D
385 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:33:49 2016 done: Sat Nov 5 04:33:50 2016
Total Scan time: 2.800 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]