Result of FASTA (ccds) for
pFN21AE0795
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0795, 358 aa
1>>>pF1KE0795 358 - 358 aa - 358 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4745+/-0.000783; mu= 7.3726+/- 0.047
mean_var=145.3242+/-28.074, 0's: 0 Z-trim(113.4): 85 B-trim: 221 in 1/50
Lambda= 0.106391
statistics sampled from 13898 (14001) to 13898 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.762), E-opt: 0.2 (0.43), width: 16
Scan time: 3.290
The best scores are: opt bits E(32554)
CCDS11705.1 SLC9A3R1 gene_id:9368|Hs108|chr17 ( 358) 2370 374.9 5.8e-104
CCDS45382.1 SLC9A3R2 gene_id:9351|Hs108|chr16 ( 337) 999 164.5 1.2e-40
CCDS45383.1 SLC9A3R2 gene_id:9351|Hs108|chr16 ( 326) 998 164.3 1.3e-40
CCDS58407.1 SLC9A3R2 gene_id:9351|Hs108|chr16 ( 226) 598 102.8 3e-22
CCDS72859.1 PDZK1 gene_id:5174|Hs108|chr1 ( 408) 482 85.2 1.1e-16
CCDS8417.1 PDZD3 gene_id:79849|Hs108|chr11 ( 491) 426 76.6 4.9e-14
CCDS53719.1 PDZD3 gene_id:79849|Hs108|chr11 ( 505) 426 76.6 5e-14
>>CCDS11705.1 SLC9A3R1 gene_id:9368|Hs108|chr17 (358 aa)
initn: 2370 init1: 2370 opt: 2370 Z-score: 1980.0 bits: 374.9 E(32554): 5.8e-104
Smith-Waterman score: 2370; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KE0 MSADAAAGAPLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MSADAAAGAPLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 EVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQKLGVQVREELLRAQEAPGQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQKLGVQVREELLRAQEAPGQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 EPPAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKGPSGYGFNLHSDKSKPGQFIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EPPAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKGPSGYGFNLHSDKSKPGQFIR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 SVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 SVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESPRPALVRSASSDTSEELNSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 KCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESPRPALVRSASSDTSEELNSQ
250 260 270 280 290 300
310 320 330 340 350
pF1KE0 DSPPKQDSTAPSSTSSSDPILDFNISLAMAKERAHQKRSSKRAPQMDWSKKNELFSNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 DSPPKQDSTAPSSTSSSDPILDFNISLAMAKERAHQKRSSKRAPQMDWSKKNELFSNL
310 320 330 340 350
>>CCDS45382.1 SLC9A3R2 gene_id:9351|Hs108|chr16 (337 aa)
initn: 1083 init1: 966 opt: 999 Z-score: 843.1 bits: 164.5 E(32554): 1.2e-40
Smith-Waterman score: 1104; 52.1% identity (72.0% similar) in 361 aa overlap (6-358:2-337)
10 20 30 40 50
pF1KE0 MSADAAAGAPL-PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRL
:: :: :::: : .: .:::::::::::. ::.:: :::::::: :.: :::::
CCDS45 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRL
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 VEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQKLGVQVREELLRAQEA-PG
::::: ::: :::.:::.::.:. . .:::::: ::::.:.. . ::. ::.. :
CCDS45 VEVNGVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEM--AQRGLPP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 QAEP--PAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKGPSGYGFNLHSDKSKPG
.: : .. ... .: . : : : :::::::: ..:::.:::::::::::.::
CCDS45 AHDPWEPKPDWAHTGSHSSEAGKKDVSGP-LRELRPRLCHLRKGPQGYGFNLHSDKSRPG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 QFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETD
:.:::::: ::: ::::::::..:::: .:: .:..::..:.: ::..::::: :::
CCDS45 QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETD
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 EFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESPRPALVRSASSDTSEE
: ::. :: :..::..:::: : ::: :: . ..:. .:.
CCDS45 EHFKRLRVTPTEEHVEGPLPSPVTNGT------------------SPAQLNGGSACSSR-
240 250 260 270
300 310 320 330 340 350
pF1KE0 LNSQDSPPKQDSTAPSSTSSSDPILDFNISL----AMAKERAHQKRSSKRAPQMDWSKKN
.: : .. .: .:. ..::. . .. : : :::.:. : .::::::::..:
CCDS45 ---SDLPGSDKDTEDGSAWKQDPFQESGLHLSPTAAEAKEKARAMRVNKRAPQMDWNRKR
280 290 300 310 320 330
pF1KE0 ELFSNL
:.:::.
CCDS45 EIFSNF
>>CCDS45383.1 SLC9A3R2 gene_id:9351|Hs108|chr16 (326 aa)
initn: 1083 init1: 966 opt: 998 Z-score: 842.5 bits: 164.3 E(32554): 1.3e-40
Smith-Waterman score: 1084; 52.1% identity (71.1% similar) in 357 aa overlap (6-358:2-326)
10 20 30 40 50
pF1KE0 MSADAAAGAPL-PRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRL
:: :: :::: : .: .:::::::::::. ::.:: :::::::: :.: :::::
CCDS45 MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRL
10 20 30 40 50
60 70 80 90 100 110
pF1KE0 VEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQKLGVQVREELLRAQEA-PG
::::: ::: :::.:::.::.:. . .:::::: ::::.:.. . ::. ::.. :
CCDS45 VEVNGVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEM--AQRGLPP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE0 QAEP--PAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKGPSGYGFNLHSDKSKPG
.: : .. ... .: . : : : :::::::: ..:::.:::::::::::.::
CCDS45 AHDPWEPKPDWAHTGSHSSEAGKKDVSGP-LRELRPRLCHLRKGPQGYGFNLHSDKSRPG
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE0 QFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETD
:.:::::: ::: ::::::::..:::: .:: .:..::..:.: ::..::::: :::
CCDS45 QYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETD
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE0 EFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESPRPALVRSASSDTSEE
: ::. :: :..::..:::: : ::: :: . ..:. .:.
CCDS45 EHFKRLRVTPTEEHVEGPLPSPVTNGT------------------SPAQLNGGSACSSR-
240 250 260 270
300 310 320 330 340 350
pF1KE0 LNSQDSPPKQDSTAPSSTSSSDPILDFNISLAMAKERAHQKRSSKRAPQMDWSKKNELFS
.: : .. .: :. : .. . : :::.:. : .::::::::..: :.::
CCDS45 ---SDLPGSDKDTEESG-------LHLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFS
280 290 300 310 320
pF1KE0 NL
:.
CCDS45 NF
>>CCDS58407.1 SLC9A3R2 gene_id:9351|Hs108|chr16 (226 aa)
initn: 677 init1: 560 opt: 598 Z-score: 512.9 bits: 102.8 E(32554): 3e-22
Smith-Waterman score: 703; 49.0% identity (69.6% similar) in 247 aa overlap (118-358:5-226)
90 100 110 120 130 140
pF1KE0 LLVVDPETDEQLQKLGVQVREELLRAQEAPGQAEPPAAAEVQGAGNENEPRE--ADKSHP
:.: ::: : :: .. :.. : : :
CCDS58 MARSGSATPPARA--PGAPPRSPPQRLVQDVSGP
10 20 30
150 160 170 180 190 200
pF1KE0 EQRELRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGV
:::::::: ..:::.:::::::::::.:::.:::::: ::: ::::::::..::::
CCDS58 -LRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQ
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE0 CMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNGEIQ
.:: .:..::..:.: ::..::::: :::: ::. :: :..::..:::: : :::
CCDS58 NVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLRVTPTEEHVEGPLPSPVTNGT--
100 110 120 130 140
270 280 290 300 310 320
pF1KE0 KENSREALAEAALESPRPALVRSASSDTSEELNSQDSPPKQDSTAPSSTSSSDPILDFNI
:: . ..:. .:. .: : .. .: .:. ..::. . ..
CCDS58 ----------------SPAQLNGGSACSSR----SDLPGSDKDTEDGSAWKQDPFQESGL
150 160 170 180
330 340 350
pF1KE0 SL----AMAKERAHQKRSSKRAPQMDWSKKNELFSNL
: : :::.:. : .::::::::..: :.:::.
CCDS58 HLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF
190 200 210 220
>>CCDS72859.1 PDZK1 gene_id:5174|Hs108|chr1 (408 aa)
initn: 511 init1: 246 opt: 482 Z-score: 413.0 bits: 85.2 E(32554): 1.1e-16
Smith-Waterman score: 488; 34.0% identity (61.2% similar) in 291 aa overlap (12-302:133-406)
10 20 30 40
pF1KE0 MSADAAAGAPLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRL
:::: : : ..::: : : :: :.
CCDS72 KELGQSQKEQGLSDNILSPVMNGGVQTWTQPRLCYLVKEGGSYGFSL---KTVQGQIIKD
110 120 130 140 150
50 60 70 80 90 100
pF1KE0 VEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQK
.. :::::.::: .: .: ::::.:: :..:: :: . . . ::::: :::. . .
CCDS72 IDSGSPAEEAGLKNNDLVVAVNGESVETLDHDSVVEMIRKGGDQTSLLVVDKETDN-MYR
160 170 180 190 200 210
110 120 130 140 150 160
pF1KE0 LGVQVREELLRAQEAPGQAEPPAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKGP
:. ..:: :. . : : . . . . : .. :. . .:.:: . ::
CCDS72 LAHFSPFLYYQSQELPNGSVKEAPAPTPTSLEVSSPPDTT----EEVDHKPKLCRLAKGE
220 230 240 250 260 270
170 180 190 200 210 220
pF1KE0 SGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRA
.::::.:.. .. ::.::. :. .::. .::. .: :.::::: . . . ::. :..
CCDS72 NGYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQS
280 290 300 310 320 330
230 240 250 260 270 280
pF1KE0 GGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESP
.: .. ::: ... ..:. . :: : :: .: .:.:... . ..
CCDS72 SGKNVTLLVCGKKAYDYFQAKK-IPIVSSLADPLDTP--------PDSKEGIVVESNHDS
340 350 360 370 380
290 300 310 320 330 340
pF1KE0 RPALVRSASSDTSEELNSQDSPPKQDSTAPSSTSSSDPILDFNISLAMAKERAHQKRSSK
. : :. :. . ::.:.
CCDS72 HMAKERAHSTASHSSSNSEDTEM
390 400
>>CCDS8417.1 PDZD3 gene_id:79849|Hs108|chr11 (491 aa)
initn: 570 init1: 215 opt: 426 Z-score: 365.4 bits: 76.6 E(32554): 4.9e-14
Smith-Waterman score: 426; 41.7% identity (61.9% similar) in 218 aa overlap (1-210:233-444)
10 20
pF1KE0 MSADAAAGAPLP---RLCCLEKGPNGYGFH
..: : : :: : :::::.:.::
CCDS84 VNGLWQSGQQVTLLVAGPEVEEQCRQLGLPLAAPLAEGWALPTKPRCLHLEKGPQGFGFL
210 220 230 240 250 260
30 40 50 60 70 80
pF1KE0 LHGEKG---KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALN
:. ::: . ::.. :.:: ::.:::. :::::: : ::.:: :...::::.. .
CCDS84 LREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGS
270 280 290 300 310 320
90 100 110 120 130 140
pF1KE0 AVRLLVVDPETDEQLQKLGVQVREEL-LRAQEAPGQAEPPAAAEVQGAGNENEPREADKS
: : :::::.:. .. :.. : :. ::: : : ... .. . .:. : : :
CCDS84 CVSLTVVDPEADRFFSM--VRLSPLLFLENTEAP--ASPRGSSSASLVETED-PSLEDTS
330 340 350 360 370
150 160 170 180 190 200
pF1KE0 HPEQRELRPRLCTMKKGPSG-YGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEV
: . : : : . ::.: ::: : : : :: .: : . : .::.. : :.::
CCDS84 VP-SVPLGSRQCFLYPGPGGSYGFRLSCVASGPRLFISQVTPGGSAARAGLQVGDVILEV
380 390 400 410 420 430
210 220 230 240 250 260
pF1KE0 NGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNG
:: . :.
CCDS84 NGYPVGGQNDLERLQQLPEAEPPLCLKLAARSLRGLEAWIPPGAAEDWALASDLL
440 450 460 470 480 490
>>CCDS53719.1 PDZD3 gene_id:79849|Hs108|chr11 (505 aa)
initn: 621 init1: 215 opt: 426 Z-score: 365.2 bits: 76.6 E(32554): 5e-14
Smith-Waterman score: 426; 41.7% identity (61.9% similar) in 218 aa overlap (1-210:247-458)
10 20
pF1KE0 MSADAAAGAPLP---RLCCLEKGPNGYGFH
..: : : :: : :::::.:.::
CCDS53 TRKLWQSGQQVTLLVAGPEVEEQCRQLGLPLAAPLAEGWALPTKPRCLHLEKGPQGFGFL
220 230 240 250 260 270
30 40 50 60 70 80
pF1KE0 LHGEKG---KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALN
:. ::: . ::.. :.:: ::.:::. :::::: : ::.:: :...::::.. .
CCDS53 LREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGS
280 290 300 310 320 330
90 100 110 120 130 140
pF1KE0 AVRLLVVDPETDEQLQKLGVQVREEL-LRAQEAPGQAEPPAAAEVQGAGNENEPREADKS
: : :::::.:. .. :.. : :. ::: : : ... .. . .:. : : :
CCDS53 CVSLTVVDPEADRFFSM--VRLSPLLFLENTEAP--ASPRGSSSASLVETED-PSLEDTS
340 350 360 370 380 390
150 160 170 180 190 200
pF1KE0 HPEQRELRPRLCTMKKGPSG-YGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEV
: . : : : . ::.: ::: : : : :: .: : . : .::.. : :.::
CCDS53 VP-SVPLGSRQCFLYPGPGGSYGFRLSCVASGPRLFISQVTPGGSAARAGLQVGDVILEV
400 410 420 430 440 450
210 220 230 240 250 260
pF1KE0 NGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNG
:: . :.
CCDS53 NGYPVGGQNDLERLQQLPEAEPPLCLKLAARSLRGLEAWIPPGAAEDWALASDLL
460 470 480 490 500
358 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 03:11:52 2016 done: Sat Nov 5 03:11:52 2016
Total Scan time: 3.290 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]