FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4108, 478 aa 1>>>pF1KE4108 478 - 478 aa - 478 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3508+/-0.00093; mu= 13.2776+/- 0.055 mean_var=130.8146+/-26.905, 0's: 0 Z-trim(109.8): 97 B-trim: 611 in 2/50 Lambda= 0.112136 statistics sampled from 11052 (11163) to 11052 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.717), E-opt: 0.2 (0.343), width: 16 Scan time: 3.250 The best scores are: opt bits E(32554) CCDS3045.1 ABTB1 gene_id:80325|Hs108|chr3 ( 478) 3273 541.2 9e-154 CCDS46901.1 ABTB1 gene_id:80325|Hs108|chr3 ( 336) 2288 381.7 6.6e-106 >>CCDS3045.1 ABTB1 gene_id:80325|Hs108|chr3 (478 aa) initn: 3273 init1: 3273 opt: 3273 Z-score: 2874.1 bits: 541.2 E(32554): 9e-154 Smith-Waterman score: 3273; 100.0% identity (100.0% similar) in 478 aa overlap (1-478:1-478) 10 20 30 40 50 60 pF1KE4 MDTSDLFASCRKGDVGRVRYLLEQRDVEVNVRDKWDSTPLYYACLCGHEELVLYLLANGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 MDTSDLFASCRKGDVGRVRYLLEQRDVEVNVRDKWDSTPLYYACLCGHEELVLYLLANGA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 RCEANTFDGERCLYGALSDPIRRALRDYKQVTASCRRRDYYDDFLQRLLEQGIHSDVVFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 RCEANTFDGERCLYGALSDPIRRALRDYKQVTASCRRRDYYDDFLQRLLEQGIHSDVVFV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 VHGKPFRVHRCVLGARSAYFANMLDTKWKGKSVVVLRHPLINPVAFGALLQYLYTGRLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 VHGKPFRVHRCVLGARSAYFANMLDTKWKGKSVVVLRHPLINPVAFGALLQYLYTGRLDI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 GVEHVSDCERLAKQCQLWDLLSDLEAKCEKVSEFVASKPGTCVKVLTIEPPPADPRLRED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 GVEHVSDCERLAKQCQLWDLLSDLEAKCEKVSEFVASKPGTCVKVLTIEPPPADPRLRED 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 MALLADCALPPELRGDLWELPFPCPDGFNSCPDICFRVAGCSFLCHKAFFCGRSDYFRAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 MALLADCALPPELRGDLWELPFPCPDGFNSCPDICFRVAGCSFLCHKAFFCGRSDYFRAL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LDDHFRESEEPATSGGPPAVTLHGISPDVFTHVLYYMYSDHTELSPEAAYDVLSVADMYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 LDDHFRESEEPATSGGPPAVTLHGISPDVFTHVLYYMYSDHTELSPEAAYDVLSVADMYL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 LPGLKRLCGRSLAQMLDEDTVVGVWRVAKLFRLARLEDQCTEYMAKVIEKLVEREDFVEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 LPGLKRLCGRSLAQMLDEDTVVGVWRVAKLFRLARLEDQCTEYMAKVIEKLVEREDFVEA 370 380 390 400 410 420 430 440 450 460 470 pF1KE4 VKEEAAAVAARQETDSIPLVDDIRFHVASTVQTYSAIEEAQQRLRALEDLLVSIGLDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 VKEEAAAVAARQETDSIPLVDDIRFHVASTVQTYSAIEEAQQRLRALEDLLVSIGLDC 430 440 450 460 470 >>CCDS46901.1 ABTB1 gene_id:80325|Hs108|chr3 (336 aa) initn: 2288 init1: 2288 opt: 2288 Z-score: 2014.9 bits: 381.7 E(32554): 6.6e-106 Smith-Waterman score: 2288; 100.0% identity (100.0% similar) in 336 aa overlap (143-478:1-336) 120 130 140 150 160 170 pF1KE4 IHSDVVFVVHGKPFRVHRCVLGARSAYFANMLDTKWKGKSVVVLRHPLINPVAFGALLQY :::::::::::::::::::::::::::::: CCDS46 MLDTKWKGKSVVVLRHPLINPVAFGALLQY 10 20 30 180 190 200 210 220 230 pF1KE4 LYTGRLDIGVEHVSDCERLAKQCQLWDLLSDLEAKCEKVSEFVASKPGTCVKVLTIEPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LYTGRLDIGVEHVSDCERLAKQCQLWDLLSDLEAKCEKVSEFVASKPGTCVKVLTIEPPP 40 50 60 70 80 90 240 250 260 270 280 290 pF1KE4 ADPRLREDMALLADCALPPELRGDLWELPFPCPDGFNSCPDICFRVAGCSFLCHKAFFCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ADPRLREDMALLADCALPPELRGDLWELPFPCPDGFNSCPDICFRVAGCSFLCHKAFFCG 100 110 120 130 140 150 300 310 320 330 340 350 pF1KE4 RSDYFRALLDDHFRESEEPATSGGPPAVTLHGISPDVFTHVLYYMYSDHTELSPEAAYDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 RSDYFRALLDDHFRESEEPATSGGPPAVTLHGISPDVFTHVLYYMYSDHTELSPEAAYDV 160 170 180 190 200 210 360 370 380 390 400 410 pF1KE4 LSVADMYLLPGLKRLCGRSLAQMLDEDTVVGVWRVAKLFRLARLEDQCTEYMAKVIEKLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LSVADMYLLPGLKRLCGRSLAQMLDEDTVVGVWRVAKLFRLARLEDQCTEYMAKVIEKLV 220 230 240 250 260 270 420 430 440 450 460 470 pF1KE4 EREDFVEAVKEEAAAVAARQETDSIPLVDDIRFHVASTVQTYSAIEEAQQRLRALEDLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 EREDFVEAVKEEAAAVAARQETDSIPLVDDIRFHVASTVQTYSAIEEAQQRLRALEDLLV 280 290 300 310 320 330 pF1KE4 SIGLDC :::::: CCDS46 SIGLDC 478 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 01:54:00 2016 done: Sun Nov 6 01:54:00 2016 Total Scan time: 3.250 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]