Result of FASTA (omim) for
pFN21AE0653
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0653, 221 aa
1>>>pF1KE0653 221 - 221 aa - 221 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.6301+/-0.000299; mu= 20.1196+/- 0.019
mean_var=129.0599+/-30.333, 0's: 0 Z-trim(119.9): 202 B-trim: 3789 in 2/50
Lambda= 0.112896
statistics sampled from 33978 (34445) to 33978 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.763), E-opt: 0.2 (0.404), width: 16
Scan time: 5.470
The best scores are: opt bits E(85289)
NP_003760 (OMIM: 601943) serine/arginine-rich spli ( 221) 1568 265.8 4.2e-71
NP_008855 (OMIM: 600812) serine/arginine-rich spli ( 248) 977 169.6 4.2e-42
NP_001071634 (OMIM: 600812) serine/arginine-rich s ( 201) 865 151.2 1.2e-36
NP_005617 (OMIM: 601940) serine/arginine-rich spli ( 494) 414 78.4 2.4e-14
XP_011540253 (OMIM: 601940) PREDICTED: serine/argi ( 464) 409 77.5 4.1e-14
NP_001034554 (OMIM: 600914) serine/arginine-rich s ( 272) 335 65.1 1.3e-10
NP_008856 (OMIM: 600914) serine/arginine-rich spli ( 272) 335 65.1 1.3e-10
NP_001307143 (OMIM: 600914) serine/arginine-rich s ( 272) 335 65.1 1.3e-10
XP_016877082 (OMIM: 600914) PREDICTED: serine/argi ( 271) 333 64.7 1.7e-10
XP_005268057 (OMIM: 600914) PREDICTED: serine/argi ( 271) 333 64.7 1.7e-10
XP_005268056 (OMIM: 600914) PREDICTED: serine/argi ( 271) 333 64.7 1.7e-10
NP_006266 (OMIM: 601944) serine/arginine-rich spli ( 344) 246 50.7 3.4e-06
XP_005264541 (OMIM: 600572) PREDICTED: serine/argi ( 235) 239 49.3 6.2e-06
XP_005264542 (OMIM: 600572) PREDICTED: serine/argi ( 223) 238 49.1 6.8e-06
NP_001026854 (OMIM: 600572) serine/arginine-rich s ( 238) 230 47.9 1.7e-05
NP_001182375 (OMIM: 600572) serine/arginine-rich s ( 226) 225 47.0 3e-05
XP_011535379 (OMIM: 600914) PREDICTED: serine/argi ( 239) 223 46.7 3.8e-05
NP_003008 (OMIM: 603364) serine/arginine-rich spli ( 164) 206 43.7 0.00021
NP_002130 (OMIM: 300199,300238) RNA-binding motif ( 391) 204 44.0 0.00042
NP_005745 (OMIM: 608431) ras GTPase-activating pro ( 466) 189 41.7 0.0025
XP_006714813 (OMIM: 608431) PREDICTED: ras GTPase- ( 466) 189 41.7 0.0025
XP_016864412 (OMIM: 608431) PREDICTED: ras GTPase- ( 466) 189 41.7 0.0025
NP_938405 (OMIM: 608431) ras GTPase-activating pro ( 466) 189 41.7 0.0025
XP_006714812 (OMIM: 608431) PREDICTED: ras GTPase- ( 466) 189 41.7 0.0025
XP_016864411 (OMIM: 608431) PREDICTED: ras GTPase- ( 466) 189 41.7 0.0025
XP_016872631 (OMIM: 603269) PREDICTED: serine/argi ( 282) 183 40.3 0.0038
NP_115285 (OMIM: 603269) serine/arginine-rich spli ( 282) 183 40.3 0.0038
XP_016880431 (OMIM: 600813) PREDICTED: serine/argi ( 221) 178 39.4 0.0059
NP_001182356 (OMIM: 600813) serine/arginine-rich s ( 221) 178 39.4 0.0059
NP_003007 (OMIM: 600813) serine/arginine-rich spli ( 221) 178 39.4 0.0059
XP_016881726 (OMIM: 602649) PREDICTED: cold-induci ( 168) 176 38.8 0.0064
NP_001287744 (OMIM: 602649) cold-inducible RNA-bin ( 168) 176 38.8 0.0064
NP_001271 (OMIM: 602649) cold-inducible RNA-bindin ( 172) 176 38.9 0.0065
XP_006722700 (OMIM: 602649) PREDICTED: cold-induci ( 172) 176 38.9 0.0065
XP_011525970 (OMIM: 602649) PREDICTED: cold-induci ( 202) 176 39.0 0.0071
NP_001287758 (OMIM: 602649) cold-inducible RNA-bin ( 297) 176 39.2 0.0086
>>NP_003760 (OMIM: 601943) serine/arginine-rich splicing (221 aa)
initn: 1568 init1: 1568 opt: 1568 Z-score: 1397.6 bits: 265.8 E(85289): 4.2e-71
Smith-Waterman score: 1568; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221)
10 20 30 40 50 60
pF1KE0 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 DPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGRGGWPRGGRNGPPTRRSDFRVLVSGLPP
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 SGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYI
130 140 150 160 170 180
190 200 210 220
pF1KE0 RVYPERSTSYGYSRSRSGSRGRDSPYQSRGSPHYFSPFRPY
:::::::::::::::::::::::::::::::::::::::::
NP_003 RVYPERSTSYGYSRSRSGSRGRDSPYQSRGSPHYFSPFRPY
190 200 210 220
>>NP_008855 (OMIM: 600812) serine/arginine-rich splicing (248 aa)
initn: 1081 init1: 549 opt: 977 Z-score: 876.9 bits: 169.6 E(85289): 4.2e-42
Smith-Waterman score: 1004; 66.8% identity (78.8% similar) in 241 aa overlap (1-217:1-239)
10 20 30 40 50
pF1KE0 MSGWADERG--GEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVR
::: . :: :..: :::::::: :.: ::.::.::::: ::.:.::::.: :::::.
NP_008 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
10 20 30 40 50 60
60 70 80 90 100
pF1KE0 FEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTY---------GGRGGWPRGGRNGPPTRRS
::::::::::.:::.:::: ::::::::. :: :: ::: : :::.:::
NP_008 FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRG-RYGPPSRRS
70 80 90 100 110
110 120 130 140 150 160
pF1KE0 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTK
. ::.:::::::::::::::::::::::::::: .::.:.::..::::: ::.::::.::
NP_008 ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTK
120 130 140 150 160 170
170 180 190 200 210
pF1KE0 FRSHEGETSYIRVYPE--RSTSYGYSRSRSGSRGRD-----------SPYQSRGSPHYFS
::::::::.:::: . :: ::: ::::: ::.:. :: .:::::.: :
NP_008 FRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRY-S
180 190 200 210 220 230
220
pF1KE0 PFRPY
:
NP_008 PRHSRSRSRT
240
>>NP_001071634 (OMIM: 600812) serine/arginine-rich splic (201 aa)
initn: 507 init1: 462 opt: 865 Z-score: 779.2 bits: 151.2 E(85289): 1.2e-36
Smith-Waterman score: 875; 68.9% identity (82.4% similar) in 193 aa overlap (1-182:1-190)
10 20 30 40 50
pF1KE0 MSGWADERG--GEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVR
::: . :: :..: :::::::: :.: ::.::.::::: ::.:.::::.: :::::.
NP_001 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
10 20 30 40 50 60
60 70 80 90 100
pF1KE0 FEDPRDAEDAIYGRNGYDYGQCRLRVEFPRTY---------GGRGGWPRGGRNGPPTRRS
::::::::::.:::.:::: ::::::::. :: :: ::: : :::.:::
NP_001 FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRG-RYGPPSRRS
70 80 90 100 110
110 120 130 140 150 160
pF1KE0 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTK
. ::.:::::::::::::::::::::::::::: .::.:.::..::::: ::.::::.::
NP_001 ENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTK
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE0 FRSHEGETSYIRVYPERSTSYGYSRSRSGSRGRDSPYQSRGSPHYFSPFRPY
::::: ..: :.
NP_001 FRSHE--VGYTRILFFDQNWIQWS
180 190 200
>>NP_005617 (OMIM: 601940) serine/arginine-rich splicing (494 aa)
initn: 283 init1: 125 opt: 414 Z-score: 378.5 bits: 78.4 E(85289): 2.4e-14
Smith-Waterman score: 476; 42.9% identity (66.2% similar) in 210 aa overlap (15-211:3-204)
10 20 30 40 50 60
pF1KE0 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE
:.:.: : ..::.:.: .: ::.: :..::: .: ::.:.
NP_005 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYG-----FVEFD
10 20 30 40
70 80 90 100
pF1KE0 DPRDAEDAIYGRNGYDYGQCRLRVEF---PR---TYG-GRGGWP--RGGRN--GPPTRRS
: :::.::.: :: : :. :: :: .:: ::.:. :.::. ::::: .
NP_005 DLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTR-T
50 60 70 80 90 100
110 120 130 140 150 160
pF1KE0 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GVGMVEYLRKEDMEYALRKLDD
..:..: .: :::::::.::.::.: :::..: . :..:.. ::. ::.:::
NP_005 EYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDG
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE0 TKFRSHEGETSYIRVYPERSTSYGYSRSRSGSRGRDSPYQSRGSPHYFSPFRPY
:. ... .. : .:::::: ::.:. .:: :
NP_005 TEVNGRK--IRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRS
170 180 190 200 210 220
NP_005 RSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNN
230 240 250 260 270 280
>>XP_011540253 (OMIM: 601940) PREDICTED: serine/arginine (464 aa)
initn: 443 init1: 119 opt: 409 Z-score: 374.4 bits: 77.5 E(85289): 4.1e-14
Smith-Waterman score: 471; 43.8% identity (67.1% similar) in 210 aa overlap (15-209:3-205)
10 20 30 40 50 60
pF1KE0 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE
:.:.: : ..::.:.: .: ::.: :..::: .: ::.:.
XP_011 MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYG-----FVEFD
10 20 30 40
70 80 90 100
pF1KE0 DPRDAEDAIYGRNGYDYGQCRLRVEF---PR---TYG-GRGGWP--RGGRN--GPPTRRS
: :::.::.: :: : :. :: :: .:: ::.:. :.::. ::::: .
XP_011 DLRDADDAVYELNGKDLCGERVIVEHARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTR-T
50 60 70 80 90 100
110 120 130 140 150 160
pF1KE0 DFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKD--GVGMVEYLRKEDMEYALRKLDD
..:..: .: :::::::.::.::.: :::..: . :..:.. ::. ::.:::
XP_011 EYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDG
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE0 TKFRSHEGETSYIRVYPERSTSYGYSRS--RSGSRGRDSPYQSRGSPHYFSPFRPY
:. ... . . .: ::. ::: :::::.: : .::
XP_011 TEVNGRKIRLVEDKPGSRRRRSYSRSRSHSRSGSRSR-SKSRSRSQSRSRSKKEKSRSPS
170 180 190 200 210 220
XP_011 KEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEE
230 240 250 260 270 280
>>NP_001034554 (OMIM: 600914) serine/arginine-rich splic (272 aa)
initn: 446 init1: 155 opt: 335 Z-score: 311.4 bits: 65.1 E(85289): 1.3e-10
Smith-Waterman score: 427; 39.6% identity (61.8% similar) in 217 aa overlap (15-209:5-216)
10 20 30 40 50 60
pF1KE0 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE
:...: : .::::.: .: :::::.:.:: .: :.::.::
NP_001 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLK--RG---FGFVEFE
10 20 30 40
70 80 90 100
pF1KE0 DPRDAEDAIYGRNGYDYGQCRLRVEFPR--TYGGRG-GW---------PRGGRNGPPTRR
:::::.::.: .: . . :. .: : . :::: : ::. : . : :
NP_001 DPRDADDAVYELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVR
50 60 70 80 90 100
110 120 130 140 150 160
pF1KE0 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGV--GMVEYLRKEDMEYALRKL-
.. :..: .: ::::::: ::.::.: .::... . :.::. :.. :..::
NP_001 TENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLS
110 120 130 140 150 160
170 180 190 200 210
pF1KE0 ----DDTKFRSHEGETSYIRVYPE---RSTSYGYSRSRSGSRGRDSPYQSRGSPHYFSPF
. :.. :: . : . :. : . ::::: ::.: : .::
NP_001 GKEINGRKIKLIEGSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRS
170 180 190 200 210 220
220
pF1KE0 RPY
NP_001 KSRSVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
230 240 250 260 270
>>NP_008856 (OMIM: 600914) serine/arginine-rich splicing (272 aa)
initn: 446 init1: 155 opt: 335 Z-score: 311.4 bits: 65.1 E(85289): 1.3e-10
Smith-Waterman score: 427; 39.6% identity (61.8% similar) in 217 aa overlap (15-209:5-216)
10 20 30 40 50 60
pF1KE0 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE
:...: : .::::.: .: :::::.:.:: .: :.::.::
NP_008 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLK--RG---FGFVEFE
10 20 30 40
70 80 90 100
pF1KE0 DPRDAEDAIYGRNGYDYGQCRLRVEFPR--TYGGRG-GW---------PRGGRNGPPTRR
:::::.::.: .: . . :. .: : . :::: : ::. : . : :
NP_008 DPRDADDAVYELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVR
50 60 70 80 90 100
110 120 130 140 150 160
pF1KE0 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGV--GMVEYLRKEDMEYALRKL-
.. :..: .: ::::::: ::.::.: .::... . :.::. :.. :..::
NP_008 TENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLS
110 120 130 140 150 160
170 180 190 200 210
pF1KE0 ----DDTKFRSHEGETSYIRVYPE---RSTSYGYSRSRSGSRGRDSPYQSRGSPHYFSPF
. :.. :: . : . :. : . ::::: ::.: : .::
NP_008 GKEINGRKIKLIEGSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRS
170 180 190 200 210 220
220
pF1KE0 RPY
NP_008 KSRSVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
230 240 250 260 270
>>NP_001307143 (OMIM: 600914) serine/arginine-rich splic (272 aa)
initn: 446 init1: 155 opt: 335 Z-score: 311.4 bits: 65.1 E(85289): 1.3e-10
Smith-Waterman score: 427; 39.6% identity (61.8% similar) in 217 aa overlap (15-209:5-216)
10 20 30 40 50 60
pF1KE0 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE
:...: : .::::.: .: :::::.:.:: .: :.::.::
NP_001 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLK--RG---FGFVEFE
10 20 30 40
70 80 90 100
pF1KE0 DPRDAEDAIYGRNGYDYGQCRLRVEFPR--TYGGRG-GW---------PRGGRNGPPTRR
:::::.::.: .: . . :. .: : . :::: : ::. : . : :
NP_001 DPRDADDAVYELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVR
50 60 70 80 90 100
110 120 130 140 150 160
pF1KE0 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGV--GMVEYLRKEDMEYALRKL-
.. :..: .: ::::::: ::.::.: .::... . :.::. :.. :..::
NP_001 TENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLS
110 120 130 140 150 160
170 180 190 200 210
pF1KE0 ----DDTKFRSHEGETSYIRVYPE---RSTSYGYSRSRSGSRGRDSPYQSRGSPHYFSPF
. :.. :: . : . :. : . ::::: ::.: : .::
NP_001 GKEINGRKIKLIEGSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRS
170 180 190 200 210 220
220
pF1KE0 RPY
NP_001 KSRSVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
230 240 250 260 270
>>XP_016877082 (OMIM: 600914) PREDICTED: serine/arginine (271 aa)
initn: 392 init1: 155 opt: 333 Z-score: 309.6 bits: 64.7 E(85289): 1.7e-10
Smith-Waterman score: 424; 39.3% identity (61.2% similar) in 214 aa overlap (15-209:5-213)
10 20 30 40 50 60
pF1KE0 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE
:...: : .::::.: .: :::::.:.:: .: :.::.::
XP_016 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLK--RG---FGFVEFE
10 20 30 40
70 80 90 100
pF1KE0 DPRDAEDAIYGRNGYDYGQCRLRVEFPR--TYGGRG-GW---------PRGGRNGPPTRR
:::::.::.: .: . . :. .: : . :::: : ::. : . : :
XP_016 DPRDADDAVYELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVR
50 60 70 80 90 100
110 120 130 140 150 160
pF1KE0 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGV--GMVEYLRKEDMEYALRKL-
.. :..: .: ::::::: ::.::.: .::... . :.::. :.. :..::
XP_016 TENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLS
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE0 ----DDTKFRSHEGETSYIRVYPERSTSYGYSRSRSGSRGRDSPYQSRGSPHYFSPFRPY
. :.. :: . :: . . ::::: ::.:. ::
XP_016 GKEINGRKIKLIEGSKRHRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSK
170 180 190 200 210 220
XP_016 SRSVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
230 240 250 260 270
>>XP_005268057 (OMIM: 600914) PREDICTED: serine/arginine (271 aa)
initn: 392 init1: 155 opt: 333 Z-score: 309.6 bits: 64.7 E(85289): 1.7e-10
Smith-Waterman score: 424; 39.3% identity (61.2% similar) in 214 aa overlap (15-209:5-213)
10 20 30 40 50 60
pF1KE0 MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE
:...: : .::::.: .: :::::.:.:: .: :.::.::
XP_005 MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLK--RG---FGFVEFE
10 20 30 40
70 80 90 100
pF1KE0 DPRDAEDAIYGRNGYDYGQCRLRVEFPR--TYGGRG-GW---------PRGGRNGPPTRR
:::::.::.: .: . . :. .: : . :::: : ::. : . : :
XP_005 DPRDADDAVYELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVR
50 60 70 80 90 100
110 120 130 140 150 160
pF1KE0 SDFRVLVSGLPPSGSWQDLKDHMREAGDVCYADVQKDGV--GMVEYLRKEDMEYALRKL-
.. :..: .: ::::::: ::.::.: .::... . :.::. :.. :..::
XP_005 TENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLS
110 120 130 140 150 160
170 180 190 200 210 220
pF1KE0 ----DDTKFRSHEGETSYIRVYPERSTSYGYSRSRSGSRGRDSPYQSRGSPHYFSPFRPY
. :.. :: . :: . . ::::: ::.:. ::
XP_005 GKEINGRKIKLIEGSKRHRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSK
170 180 190 200 210 220
XP_005 SRSVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN
230 240 250 260 270
221 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 18:50:59 2016 done: Wed Nov 2 18:51:00 2016
Total Scan time: 5.470 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]