FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1289, 929 aa 1>>>pF1KE1289 929 - 929 aa - 929 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 14.1994+/-0.00105; mu= -17.2500+/- 0.064 mean_var=490.4993+/-98.459, 0's: 0 Z-trim(117.1): 30 B-trim: 0 in 0/56 Lambda= 0.057910 statistics sampled from 17732 (17756) to 17732 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.805), E-opt: 0.2 (0.545), width: 16 Scan time: 5.920 The best scores are: opt bits E(32554) CCDS41487.1 TAF3 gene_id:83860|Hs108|chr10 ( 929) 6223 534.7 3.1e-151 >>CCDS41487.1 TAF3 gene_id:83860|Hs108|chr10 (929 aa) initn: 6223 init1: 6223 opt: 6223 Z-score: 2828.5 bits: 534.7 E(32554): 3.1e-151 Smith-Waterman score: 6223; 99.8% identity (99.9% similar) in 929 aa overlap (1-929:1-929) 10 20 30 40 50 60 pF1KE1 MCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PILDDVGEAFQLMGVSLHELEDYIHNIEPVTFPHQIPSFPVSKNNVLQFPQPGSKDAEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 PILDDVGEAFQLMGVSLHELEDYIHNIEPVTFPHQIPSFPVSKNNVLQFPQPGSKDAEER 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KEYIPDYLPPIVSSQEEEEEEQVPTDGGTSAEAMQVPLEEDDELEEEEIINDENFLGKRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 KEYIPDYLPPIVSSQEEEEEEQVPTDGGTSAEAMQVPLEEDDELEEEEIINDENFLGKRP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LDSPEAEELPAMKRPRLLSTKGDTLDVVLLEAREPLSSINTQKIPPMLSPVHVQDSTDLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 LDSPEAEELPAMKRPRLLSTKGDTLDVVLLEAREPLSSINTQKIPPMLSPVHVQDSTDLA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 PPSPEPPMLAPVAKSQMPTAKPLETKSFTPKTKTKTSSPGQKTKSPKTAQSPAMVGSPIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 PPSPEPPMLAPVAKSQMPTAKPLETKSFTPKTKTKTSSPGQKTKSPKTAQSPAMVGSPIR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 SPKTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSEKISKETIQVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 SPKTVSKEKKSPGRSKSPKSPKSPKVTTHIPQTPVRPETPNRTPSATLSEKISKETIQVK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 QIQTPPDAGKLNSENQPKKAVVADKTIEASIDAVIARACAEREPDPFEFSSGSESEGDIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 QIQTPPDAGKLNSENQPKKAVVADKTIEASIDAVIARACAEREPDPFEFSSGSESEGDIF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 TSPKRISGPECTTPKASTSANSFTKSGSTPLPLSGGTSSSDNSWTMDASIDEVVRKAKLG :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: CCDS41 TSPKRISGPECTTPKASTSANNFTKSGSTPLPLSGGTSSSDNSWTMDASIDEVVRKAKLG 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 TPSNMPPNFPYISSPSVSPPTPEPLHKVYEEKTKLPSSVEVKKKLKKELKTKMKKKEKQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 TPSNMPPNFPYISSPSVSPPTPEPLHKVYEEKTKLPSSVEVKKKLKKELKTKMKKKEKQR 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE1 DREREKDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLKEEEADPYKFKIKEFEDVDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 DREREKDKNKDKSKEKDKVKEKEKDKETGRETKYPWKEFLKEEEADPYKFKIKEFEDVDP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE1 KVKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKAPAPPLVLPPKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 KVKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKAPAPPLVLPPKE 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE1 LALPLFSPATASRVPAMLPSLLPVLPEKLFEEKEKPKEKEKKKDKKEKKKKKEKEKEKKE ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: CCDS41 LALPLFSPATASRVPAMLPSLLPVLPEKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKKE 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE1 KEREKEKREREKREKEKEKHKHEKIKVEPVALAPSPVIPRLTLRVGAGQDKIVISKVVPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 KEREKEKREREKREKEKEKHKHEKIKVEPVALAPSPVIPRLTLRVGAGQDKIVISKVVPA 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE1 PEAKPAPSQNRPKTPPPAPAPAPGPMLVSPAPVPLPLLAQAAAGPALLPSPGPAASGASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 PEAKPAPSQNRPKTPPPAPAPAPGPMLVSPAPVPLPLLAQAAAGPALLPSPGPAASGASA 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE1 KAPVRSVVTETVSTYVIRDEWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 KAPVRSVVTETVSTYVIRDEWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMTA 850 860 870 880 890 900 910 920 pF1KE1 PPEEMQWFCPKCANKKKDKKHKKRKHRAH ::::::::::::::::::::::::::::: CCDS41 PPEEMQWFCPKCANKKKDKKHKKRKHRAH 910 920 929 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:36:00 2016 done: Sun Nov 6 04:36:01 2016 Total Scan time: 5.920 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]