FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3201, 471 aa 1>>>pF1KE3201 471 - 471 aa - 471 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.0150+/-0.000991; mu= 5.0968+/- 0.059 mean_var=170.7096+/-34.476, 0's: 0 Z-trim(110.7): 26 B-trim: 459 in 1/51 Lambda= 0.098162 statistics sampled from 11801 (11810) to 11801 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.715), E-opt: 0.2 (0.363), width: 16 Scan time: 2.380 The best scores are: opt bits E(32554) CCDS7887.1 FBXO3 gene_id:26273|Hs108|chr11 ( 471) 3238 470.9 1.3e-132 CCDS44566.1 FBXO3 gene_id:26273|Hs108|chr11 ( 415) 2841 414.6 9.6e-116 >>CCDS7887.1 FBXO3 gene_id:26273|Hs108|chr11 (471 aa) initn: 3238 init1: 3238 opt: 3238 Z-score: 2494.5 bits: 470.9 E(32554): 1.3e-132 Smith-Waterman score: 3238; 100.0% identity (100.0% similar) in 471 aa overlap (1-471:1-471) 10 20 30 40 50 60 pF1KE3 MAAMETETAPLTLESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 MAAMETETAPLTLESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 WLISEEEKTQKNQCWKSLFIDTYSDVGRYIDHYAAIKKAWDDLKKYLEPRCPRMVLSLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 WLISEEEKTQKNQCWKSLFIDTYSDVGRYIDHYAAIKKAWDDLKKYLEPRCPRMVLSLKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQKLVVPGLLGSMALSNHYRSEDLLDVDTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 GAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQKLVVPGLLGSMALSNHYRSEDLLDVDTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 AGGFQQRQGLKYCLPLTFCIHTGLSQYIAVEAAEGRNKNEVFYQCPDQMARNPAAIDMFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 AGGFQQRQGLKYCLPLTFCIHTGLSQYIAVEAAEGRNKNEVFYQCPDQMARNPAAIDMFI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 IGATFTDWFTSYVKNVVSGGFPIIRDQIFRYVHDPECVATTGDITVSVSTSFLPELSSVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 IGATFTDWFTSYVKNVVSGGFPIIRDQIFRYVHDPECVATTGDITVSVSTSFLPELSSVH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 PPHYFFTYRIRIEMSKDALPEKACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPGRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 PPHYFFTYRIRIEMSKDALPEKACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPGRV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 YEYTSCTTFSTTSGYMEGYYTFHFLYFKDKIFNVAIPRFHMACPTFRVSIARLEMGPDEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 YEYTSCTTFSTTSGYMEGYYTFHFLYFKDKIFNVAIPRFHMACPTFRVSIARLEMGPDEY 370 380 390 400 410 420 430 440 450 460 470 pF1KE3 EEMEEEEEEEEEEDEDDDSADMDESDEDDEEERRRRVFDVPIRRRRCSRLF ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS78 EEMEEEEEEEEEEDEDDDSADMDESDEDDEEERRRRVFDVPIRRRRCSRLF 430 440 450 460 470 >>CCDS44566.1 FBXO3 gene_id:26273|Hs108|chr11 (415 aa) initn: 2841 init1: 2841 opt: 2841 Z-score: 2191.4 bits: 414.6 E(32554): 9.6e-116 Smith-Waterman score: 2841; 100.0% identity (100.0% similar) in 413 aa overlap (1-413:1-413) 10 20 30 40 50 60 pF1KE3 MAAMETETAPLTLESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MAAMETETAPLTLESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 WLISEEEKTQKNQCWKSLFIDTYSDVGRYIDHYAAIKKAWDDLKKYLEPRCPRMVLSLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 WLISEEEKTQKNQCWKSLFIDTYSDVGRYIDHYAAIKKAWDDLKKYLEPRCPRMVLSLKE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQKLVVPGLLGSMALSNHYRSEDLLDVDTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 GAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQKLVVPGLLGSMALSNHYRSEDLLDVDTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 AGGFQQRQGLKYCLPLTFCIHTGLSQYIAVEAAEGRNKNEVFYQCPDQMARNPAAIDMFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 AGGFQQRQGLKYCLPLTFCIHTGLSQYIAVEAAEGRNKNEVFYQCPDQMARNPAAIDMFI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 IGATFTDWFTSYVKNVVSGGFPIIRDQIFRYVHDPECVATTGDITVSVSTSFLPELSSVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 IGATFTDWFTSYVKNVVSGGFPIIRDQIFRYVHDPECVATTGDITVSVSTSFLPELSSVH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 PPHYFFTYRIRIEMSKDALPEKACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPGRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 PPHYFFTYRIRIEMSKDALPEKACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPGRV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 YEYTSCTTFSTTSGYMEGYYTFHFLYFKDKIFNVAIPRFHMACPTFRVSIARLEMGPDEY ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 YEYTSCTTFSTTSGYMEGYYTFHFLYFKDKIFNVAIPRFHMACPTFRVSIARLVS 370 380 390 400 410 430 440 450 460 470 pF1KE3 EEMEEEEEEEEEEDEDDDSADMDESDEDDEEERRRRVFDVPIRRRRCSRLF 471 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 05:56:49 2016 done: Sun Nov 6 05:56:50 2016 Total Scan time: 2.380 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]