FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9534, 335 aa 1>>>pF1KE9534 335 - 335 aa - 335 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5791+/-0.000714; mu= 17.4144+/- 0.044 mean_var=110.1578+/-22.408, 0's: 0 Z-trim(113.2): 57 B-trim: 740 in 1/51 Lambda= 0.122199 statistics sampled from 13843 (13903) to 13843 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.757), E-opt: 0.2 (0.427), width: 16 Scan time: 2.710 The best scores are: opt bits E(32554) CCDS100.2 GPR157 gene_id:80045|Hs108|chr1 ( 335) 2260 408.5 4e-114 >>CCDS100.2 GPR157 gene_id:80045|Hs108|chr1 (335 aa) initn: 2260 init1: 2260 opt: 2260 Z-score: 2162.4 bits: 408.5 E(32554): 4e-114 Smith-Waterman score: 2260; 100.0% identity (100.0% similar) in 335 aa overlap (1-335:1-335) 10 20 30 40 50 60 pF1KE9 MQPSPPPTELVPSERAVVLLSCALSALGSGLLVATHALWPDLRSRARRLLLFLSLADLLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MQPSPPPTELVPSERAVVLLSCALSALGSGLLVATHALWPDLRSRARRLLLFLSLADLLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 AASYFYGVLQNFAGPSWDCVLQGALSTFANTSSFFWTVAIALYLYLSIVRAARGPRTDRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 AASYFYGVLQNFAGPSWDCVLQGALSTFANTSSFFWTVAIALYLYLSIVRAARGPRTDRL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 LWAFHVVSWGVPLVITVAAVALKKIGYDASDVSVGWCWIDLEAKDHVLWMLLTGKLWEML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 LWAFHVVSWGVPLVITVAAVALKKIGYDASDVSVGWCWIDLEAKDHVLWMLLTGKLWEML 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 AYVLLPLLYLLVRKHINRAHTALSEYRPILSQEHRLLRHSSMADKKLVLIPLIFIGLRVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 AYVLLPLLYLLVRKHINRAHTALSEYRPILSQEHRLLRHSSMADKKLVLIPLIFIGLRVW 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 STVRFVLTLCGSPAVQTPVLVVLHGIGNTFQGGANCIMFVLCTRAVRTRLFSLCCCCCSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 STVRFVLTLCGSPAVQTPVLVVLHGIGNTFQGGANCIMFVLCTRAVRTRLFSLCCCCCSS 250 260 270 280 290 300 310 320 330 pF1KE9 QPPTKSPAGTPKAPAPSKPGESQESQGTPGELPST ::::::::::::::::::::::::::::::::::: CCDS10 QPPTKSPAGTPKAPAPSKPGESQESQGTPGELPST 310 320 330 335 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 06:33:56 2016 done: Sun Nov 6 06:33:56 2016 Total Scan time: 2.710 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]