Result of FASTA (ccds) for pFN21AE3804
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3804, 199 aa
  1>>>pF1KE3804 199 - 199 aa - 199 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4072+/-0.00107; mu= 12.7751+/- 0.064
 mean_var=77.4570+/-15.940, 0's: 0 Z-trim(104.5): 219  B-trim: 219 in 1/47
 Lambda= 0.145728
 statistics sampled from 7699 (7938) to 7699 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.244), width:  16
 Scan time:  1.630

The best scores are:                                      opt bits E(32554)
CCDS73011.1 RAB7B gene_id:338382|Hs108|chr1        ( 199) 1305 283.8 4.8e-77
CCDS76258.1 RAB7B gene_id:338382|Hs108|chr1        ( 157)  855 189.1 1.2e-48
CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3           ( 207)  618 139.4 1.5e-33
CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX          ( 201)  508 116.2 1.3e-26
CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX         ( 201)  493 113.1 1.2e-25
CCDS4962.1 RAB23 gene_id:51715|Hs108|chr6          ( 237)  412 96.1 1.8e-20
CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1          ( 218)  411 95.9 1.9e-20
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2          ( 205)  408 95.2 2.9e-20
CCDS5210.1 RAB32 gene_id:10981|Hs108|chr6          ( 225)  408 95.3 3.1e-20
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11        ( 201)  401 93.7 7.8e-20
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3          ( 208)  401 93.8   8e-20
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2          ( 200)  394 92.3 2.2e-19
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11          ( 208)  392 91.9   3e-19
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12        ( 201)  389 91.2 4.5e-19
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11          ( 208)  388 91.0 5.3e-19
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12          ( 215)  386 90.6 7.3e-19
CCDS3976.1 RAB3C gene_id:115827|Hs108|chr5         ( 227)  384 90.2   1e-18
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11         ( 203)  383 90.0 1.1e-18
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3           ( 215)  382 89.8 1.3e-18
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1           ( 203)  381 89.5 1.5e-18
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19        ( 213)  380 89.4 1.7e-18
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14         ( 216)  380 89.4 1.8e-18
CCDS560.1 RAB3B gene_id:5865|Hs108|chr1            ( 219)  380 89.4 1.8e-18
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9          ( 215)  377 88.7 2.7e-18
CCDS12257.1 RAB3D gene_id:9545|Hs108|chr19         ( 219)  376 88.5 3.2e-18
CCDS8281.1 RAB38 gene_id:23682|Hs108|chr11         ( 211)  374 88.1 4.2e-18
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8           ( 212)  373 87.9 4.8e-18
CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18       ( 244)  372 87.7 6.2e-18
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17         ( 216)  371 87.5 6.6e-18
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19         ( 220)  371 87.5 6.7e-18
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17         ( 249)  371 87.5 7.3e-18
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19         ( 207)  370 87.2 7.3e-18
CCDS41413.1 RAB25 gene_id:57111|Hs108|chr1         ( 213)  361 85.4 2.8e-17
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17       ( 216)  360 85.2 3.3e-17
CCDS45826.1 RAB31 gene_id:11031|Hs108|chr18        ( 195)  358 84.7   4e-17
CCDS1459.1 RAB29 gene_id:8934|Hs108|chr1           ( 203)  352 83.4   1e-16
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10         ( 206)  352 83.5   1e-16
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15        ( 207)  352 83.5   1e-16
CCDS3747.1 RAB33B gene_id:83452|Hs108|chr4         ( 229)  349 82.9 1.7e-16
CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20       ( 194)  347 82.4   2e-16
CCDS8702.1 KRAS gene_id:3845|Hs108|chr12           ( 188)  346 82.2 2.2e-16
CCDS34300.1 RAB24 gene_id:53917|Hs108|chr5         ( 203)  346 82.2 2.4e-16
CCDS2131.1 RALB gene_id:5899|Hs108|chr2            ( 206)  345 82.0 2.8e-16
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17       ( 223)  345 82.0   3e-16
CCDS7814.1 RRAS2 gene_id:22800|Hs108|chr11         ( 204)  344 81.8 3.2e-16
CCDS35322.2 RAB41 gene_id:347517|Hs108|chrX        ( 221)  344 81.8 3.4e-16
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17       ( 196)  342 81.3 4.2e-16
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17       ( 228)  342 81.4 4.7e-16
CCDS7698.1 HRAS gene_id:3265|Hs108|chr11           ( 189)  339 80.7 6.3e-16
CCDS82514.1 WTH3DI gene_id:150786|Hs108|chr2       ( 254)  340 81.0 6.8e-16


>>CCDS73011.1 RAB7B gene_id:338382|Hs108|chr1             (199 aa)
 initn: 1305 init1: 1305 opt: 1305  Z-score: 1496.8  bits: 283.8 E(32554): 4.8e-77
Smith-Waterman score: 1305; 100.0% identity (100.0% similar) in 199 aa overlap (1-199:1-199)

               10        20        30        40        50        60
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPMV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 LLGNKIDLADRKVPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALSRYQSILE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 LLGNKIDLADRKVPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALSRYQSILE
              130       140       150       160       170       180

              190         
pF1KE3 NHLTESIKLSPDQSRSRCC
       :::::::::::::::::::
CCDS73 NHLTESIKLSPDQSRSRCC
              190         

>>CCDS76258.1 RAB7B gene_id:338382|Hs108|chr1             (157 aa)
 initn: 855 init1: 855 opt: 855  Z-score: 986.9  bits: 189.1 E(32554): 1.2e-48
Smith-Waterman score: 931; 78.9% identity (78.9% similar) in 199 aa overlap (1-199:1-157)

               10        20        30        40        50        60
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPMV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 LLGNKIDLADRKVPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALSRYQSILE
       ::::::::::::                                          ::::::
CCDS76 LLGNKIDLADRK------------------------------------------YQSILE
              130                                                  

              190         
pF1KE3 NHLTESIKLSPDQSRSRCC
       :::::::::::::::::::
CCDS76 NHLTESIKLSPDQSRSRCC
      140       150       

>>CCDS3052.1 RAB7A gene_id:7879|Hs108|chr3                (207 aa)
 initn: 584 init1: 390 opt: 618  Z-score: 715.9  bits: 139.4 E(32554): 1.5e-33
Smith-Waterman score: 618; 49.2% identity (77.4% similar) in 195 aa overlap (1-192:1-195)

               10        20        30        40        50        60
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ
       :. :::: ::.::.:  :::::::..:::.: : ..:..:.::..:.: ... :  . .:
CCDS30 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
               10        20        30        40        50        60

               70        80        90       100       110          
pF1KE3 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM
       ::::.:::::.:.  .::.:.: :.:.::::  ..:..:: :: . : .  : . ...:.
CCDS30 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
               70        80        90       100       110       120

     120       130       140        150       160       170        
pF1KE3 VLLGNKIDLADRKVPQEVAQGWCREKD-IPYFEVSAKNDINVVQAFEMLASRALSRYQSI
       :.::::::: .:.:  . ::.::  :. :::::.:::. ::: :::. .:  ::..   .
CCDS30 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
              130       140       150       160       170       180

       180       190              
pF1KE3 -LENHLTESIKLSPDQSRSRCC     
        : :.. : :::. .            
CCDS30 ELYNEFPEPIKLDKNDRAKASAESCSC
              190       200       

>>CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX               (201 aa)
 initn: 451 init1: 271 opt: 508  Z-score: 591.1  bits: 116.2 E(32554): 1.3e-26
Smith-Waterman score: 508; 42.6% identity (70.6% similar) in 197 aa overlap (9-199:8-201)

               10        20        30        40        50        60
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ
               .:.:..:  ::::.::...:: . :  .   :.:. .:.: . .    . .:
CCDS14  MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQ
                10        20        30        40        50         

               70        80        90       100       110          
pF1KE3 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKI-VPMEQSYPM
       ::::.:::::::. . ::.::: :.:.:.: : .::. :. :. . .    :   .:.:.
CCDS14 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF
      60        70        80        90       100       110         

     120       130       140        150       160       170        
pF1KE3 VLLGNKIDLADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRYQSI
       :.::::::...:.:  : ::.:::.. : ::::.:::.  ::. :::  . :.:.  .  
CCDS14 VILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDR-
     120       130       140       150       160       170         

      180           190         
pF1KE3 LENHL--TESIKL--SPDQSRSRCC
         .::  :....:  .:  : : ::
CCDS14 -SDHLIQTDTVNLHRKPKPSSS-CC
       180       190        200 

>>CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX              (201 aa)
 initn: 481 init1: 285 opt: 493  Z-score: 574.1  bits: 113.1 E(32554): 1.2e-25
Smith-Waterman score: 493; 40.9% identity (69.2% similar) in 198 aa overlap (5-199:4-201)

               10        20        30        40        50        60
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ
           :.. ::.:..:  ::::.::...:: . :  .   :.:. .:.. . .    . ::
CCDS14  MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQ
                10        20        30        40        50         

               70        80        90       100       110          
pF1KE3 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKI-VPMEQSYPM
       ::::.:::::.:. . ::.:.: :.:.:.: : .::: :  :. . .    :   . .:.
CCDS14 IWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPF
      60        70        80        90       100       110         

     120       130       140        150       160       170        
pF1KE3 VLLGNKIDLADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRYQSI
       :.::::.:  ::.:  : :: :: :. : ::.:.:::.: ::. :::  . ..:.  ...
CCDS14 VVLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQL
     120       130       140       150       160       170         

      180        190         
pF1KE3 LENHLTESIKL-SPDQSRSRCC
        .  : ..: : : ... : ::
CCDS14 EHCMLGHTIDLNSGSKAGSSCC
     180       190       200 

>>CCDS4962.1 RAB23 gene_id:51715|Hs108|chr6               (237 aa)
 initn: 318 init1: 286 opt: 412  Z-score: 481.0  bits: 96.1 E(32554): 1.8e-20
Smith-Waterman score: 412; 35.9% identity (76.6% similar) in 184 aa overlap (6-186:7-186)

                10        20        30        40        50         
pF1KE3  MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKL
             .: .:...::  .:::.:....: .  : ..:. :.:...: . : ..:  ..:
CCDS49 MLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRL
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KE3 QIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPM
       ..:::.:::.: ......:.:...:.:.:..:: :::::.. ::  :.:..  .    : 
CCDS49 MLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGDI----PT
               70        80        90       100       110          

     120       130        140       150       160       170        
pF1KE3 VLLGNKIDLADRK-VPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALSRY-QS
       ::. ::::: : . . .: :..  ..  . ....:.:.:.:: ..:..:: . :..  :.
CCDS49 VLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQ
        120       130       140       150       160       170      

       180        190                                              
pF1KE3 ILEN-HLTESIKLSPDQSRSRCC                                     
       : :. .::.:                                                  
CCDS49 IAEDPELTHSSSNKIGVFNTSGGSHSGQNSGTLNGGDVINLRPNKQRTKKNRNPFSSCSI
        180       190       200       210       220       230      

>>CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1               (218 aa)
 initn: 361 init1: 283 opt: 411  Z-score: 480.4  bits: 95.9 E(32554): 1.9e-20
Smith-Waterman score: 411; 39.4% identity (72.4% similar) in 170 aa overlap (9-177:14-180)

                    10        20        30        40        50     
pF1KE3      MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDT
                    .:....:  :.::. ::::...: : .. . :.:. . :::: .:  
CCDS31 MSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGK
               10        20        30        40        50        60

          60        70        80        90       100       110     
pF1KE3 TLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQ
        .:::::::.:::::::.. ..:.:. : .:..:.:. :...::  :  :  :...   :
CCDS31 YVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTD--ARMLA-SQ
               70        80        90       100       110          

         120        130       140       150       160       170    
pF1KE3 SYPMVLLGNKIDL-ADRKVPQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALSR
       .  ..: ::: :: :::.:    :. . .:... ..:.:: .  :: .:: . : . :..
CCDS31 NIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNK
       120       130       140       150       160       170       

          180       190                         
pF1KE3 YQSILENHLTESIKLSPDQSRSRCC                
        .:                                      
CCDS31 IESGELDPERMGSGIQYGDAALRQLRSPRRAQAPNAQECGC
       180       190       200       210        

>>CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2               (205 aa)
 initn: 437 init1: 315 opt: 408  Z-score: 477.4  bits: 95.2 E(32554): 2.9e-20
Smith-Waterman score: 408; 36.6% identity (63.4% similar) in 205 aa overlap (1-199:4-205)

                  10        20        30        40        50       
pF1KE3    MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTL
          :::.    .::...:  ::::. :: ...  :. : : .:.:...  . : :   :.
CCDS46 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
               10        20        30        40        50        60

        60        70        80        90       100       110       
pF1KE3 KLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSY
       :::::::.::::::...:..:.:. : :...:::: :::. .  :  ..        .. 
CCDS46 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA---SENV
               70        80        90       100       110          

       120       130        140       150       160       170      
pF1KE3 PMVLLGNKIDLADRKV-PQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALSRYQ
         .:.::: ::. .::    .:. .     ::..:.::::  :: :.:  .:..  .:. 
CCDS46 NKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMG
       120       130       140       150       160       170       

        180           190          
pF1KE3 SILENHLTES----IKLSP-DQSRSRCC
              .:.    :. .:  :: . ::
CCDS46 PGATAGGAEKSNVKIQSTPVKQSGGGCC
       180       190       200     

>>CCDS5210.1 RAB32 gene_id:10981|Hs108|chr6               (225 aa)
 initn: 360 init1: 135 opt: 408  Z-score: 476.8  bits: 95.3 E(32554): 3.1e-20
Smith-Waterman score: 424; 35.3% identity (73.1% similar) in 201 aa overlap (9-199:26-225)

                                10        20        30        40   
pF1KE3                  MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGA
                                .:....: .::::::....:::. : ..:..:.:.
CCDS52 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV
               10        20        30        40        50        60

            50         60        70        80        90       100  
pF1KE3 SILSKIIILGDTTL-KLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIW
       ..  :..   . :: .::.:: .::::: .:. ..:: . : ...::..   .:::.  :
CCDS52 DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW
               70        80        90       100       110       120

            110        120         130       140        150        
pF1KE3 RGDVLAKI-VPMEQSYPMVLLGNKIDLA--DRKVPQEVAQGWCREKDIP-YFEVSAKNDI
       ..:. .:. .:  .  : :::.:: :    . . :..: : .:.:. .  .::.:::..:
CCDS52 KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQ-FCKEHGFAGWFETSAKDNI
              130       140       150       160        170         

      160       170        180       190             
pF1KE3 NVVQAFEMLASRALSRYQSIL-ENHLTESIKLSPD----QSRSRCC
       :. .: ..:. . :  .::.  :.. ...:::. .    ...:.::
CCDS52 NIEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLRAENKSQCC
     180       190       200       210       220     

>>CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11             (201 aa)
 initn: 407 init1: 300 opt: 401  Z-score: 469.5  bits: 93.7 E(32554): 7.8e-20
Smith-Waterman score: 401; 38.9% identity (66.9% similar) in 175 aa overlap (1-174:1-172)

               10        20        30        40        50        60
pF1KE3 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ
       :::.    .::...:  ::::. :: ...  :. : : .:.:...  . : :   :.:::
CCDS31 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPMEQSYPMV
       ::::.::::::...:..:.:. : :...:::: ::.  .  :  ..        ..   .
CCDS31 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYA---SENVNKL
               70        80        90       100       110          

              130        140       150       160       170         
pF1KE3 LLGNKIDLADRKV-PQEVAQGWCREKDIPYFEVSAKNDINVVQAFEMLASRALSRYQSIL
       :.::: ::. .::  . .:. .     ::..:.::::  :: :::  .:..  .:     
CCDS31 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA
       120       130       140       150       160       170       

     180       190             
pF1KE3 ENHLTESIKLSPDQSRSRCC    
                               
CCDS31 ASGGERPNLKIDSTPVKPAGGGCC
       180       190       200 




199 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 06:40:19 2016 done: Sun Nov  6 06:40:20 2016
 Total Scan time:  1.630 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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