FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9997, 1173 aa 1>>>pF1KB9997 1173 - 1173 aa - 1173 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.6826+/-0.00107; mu= 7.2073+/- 0.065 mean_var=147.0004+/-29.368, 0's: 0 Z-trim(108.9): 19 B-trim: 3 in 1/50 Lambda= 0.105783 statistics sampled from 10487 (10491) to 10487 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.668), E-opt: 0.2 (0.322), width: 16 Scan time: 3.410 The best scores are: opt bits E(32554) CCDS110.1 UBE4B gene_id:10277|Hs108|chr1 (1173) 7754 1195.7 0 CCDS41245.1 UBE4B gene_id:10277|Hs108|chr1 (1302) 6038 933.9 0 CCDS55790.1 UBE4A gene_id:9354|Hs108|chr11 (1066) 738 125.0 9.5e-28 CCDS8396.1 UBE4A gene_id:9354|Hs108|chr11 (1073) 738 125.0 9.6e-28 >>CCDS110.1 UBE4B gene_id:10277|Hs108|chr1 (1173 aa) initn: 7754 init1: 7754 opt: 7754 Z-score: 6397.7 bits: 1195.7 E(32554): 0 Smith-Waterman score: 7754; 100.0% identity (100.0% similar) in 1173 aa overlap (1-1173:1-1173) 10 20 30 40 50 60 pF1KB9 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 RNLLLNTGSNPGTSPMFCSVASFGASSLSSLGASGGASNWDSYSDHFTIETCKETDMLNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 RNLLLNTGSNPGTSPMFCSVASFGASSLSSLGASGGASNWDSYSDHFTIETCKETDMLNY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB9 LIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB9 PYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 PYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMALG 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB9 ELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVFAEDDVKVVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVFAEDDVKVVE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB9 KYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAVVNANM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAVVNANM 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB9 KKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITLPNDETRVNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITLPNDETRVNA 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB9 TMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 TMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB9 VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL 670 680 690 700 710 720 730 740 750 760 770 780 pF1KB9 LIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQALYEPCTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQALYEPCTQ 730 740 750 760 770 780 790 800 810 820 830 840 pF1KB9 DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPS 790 800 810 820 830 840 850 860 870 880 890 900 pF1KB9 LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM 850 860 870 880 890 900 910 920 930 940 950 960 pF1KB9 LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLAL 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KB9 ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 pF1KB9 KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 1140 pF1KB9 KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDP 1090 1100 1110 1120 1130 1140 1150 1160 1170 pF1KB9 FNRQTLTESMLEPVPELKEQIQAWMREKQNSDH ::::::::::::::::::::::::::::::::: CCDS11 FNRQTLTESMLEPVPELKEQIQAWMREKQNSDH 1150 1160 1170 >>CCDS41245.1 UBE4B gene_id:10277|Hs108|chr1 (1302 aa) initn: 6019 init1: 6019 opt: 6038 Z-score: 4981.6 bits: 933.9 E(32554): 0 Smith-Waterman score: 6860; 89.3% identity (89.3% similar) in 1205 aa overlap (98-1173:98-1302) 70 80 90 100 110 120 pF1KB9 GASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIE :::::::::::::::::::::::::::::: CCDS41 GASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 NMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 NMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 KQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 KQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPDRNLLLNT 190 200 210 220 230 240 250 260 270 pF1KB9 GSNPGTSPMFCSVASFGASSLSSL------------------------------------ :::::::::::::::::::::::: CCDS41 GSNPGTSPMFCSVASFGASSLSSLYESSPAPTPSFWSSVPVMGPSLASPSRAASQLAVPS 250 260 270 280 290 300 pF1KB9 ------------------------------------------------------------ CCDS41 TPLSPHSAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASS 310 320 330 340 350 360 280 290 pF1KB9 ---------------------------------GASGGASNWDSYSDHFTIETCKETDML ::::::::::::::::::::::::::: CCDS41 SRQRPSSTGPPLPPASPSATSRRPSSLRISPSLGASGGASNWDSYSDHFTIETCKETDML 370 380 390 400 410 420 300 310 320 330 340 350 pF1KB9 NYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 NYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSF 430 440 450 460 470 480 360 370 380 390 400 410 pF1KB9 LVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 LVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMA 490 500 510 520 530 540 420 430 440 450 460 470 pF1KB9 LGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVFAEDDVKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 LGELCETKFGKTHPVCNLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVFAEDDVKV 550 560 570 580 590 600 480 490 500 510 520 530 pF1KB9 VEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAVVNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 VEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAVVNA 610 620 630 640 650 660 540 550 560 570 580 590 pF1KB9 NMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITLPNDETRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 NMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITLPNDETRV 670 680 690 700 710 720 600 610 620 630 640 650 pF1KB9 NATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 NATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELN 730 740 750 760 770 780 660 670 680 690 700 710 pF1KB9 RTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 RTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFY 790 800 810 820 830 840 720 730 740 750 760 770 pF1KB9 GLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQALYEPC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 GLLIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQALYEPC 850 860 870 880 890 900 780 790 800 810 820 830 pF1KB9 TQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 TQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLV 910 920 930 940 950 960 840 850 860 870 880 890 pF1KB9 PSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 PSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYI 970 980 990 1000 1010 1020 900 910 920 930 940 950 pF1KB9 NMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 NMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYL 1030 1040 1050 1060 1070 1080 960 970 980 990 1000 1010 pF1KB9 ALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 ALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFE 1090 1100 1110 1120 1130 1140 1020 1030 1040 1050 1060 1070 pF1KB9 PKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 PKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLL 1150 1160 1170 1180 1190 1200 1080 1090 1100 1110 1120 1130 pF1KB9 AEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 AEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPT 1210 1220 1230 1240 1250 1260 1140 1150 1160 1170 pF1KB9 DPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH ::::::::::::::::::::::::::::::::::: CCDS41 DPFNRQTLTESMLEPVPELKEQIQAWMREKQNSDH 1270 1280 1290 1300 >-- initn: 626 init1: 626 opt: 626 Z-score: 517.8 bits: 107.9 E(32554): 1.6e-22 Smith-Waterman score: 626; 100.0% identity (100.0% similar) in 97 aa overlap (1-97:1-97) 10 20 30 40 50 60 pF1KB9 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV ::::::::::::::::::::::::::::::::::::: CCDS41 TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL CCDS41 DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL 130 140 150 160 170 180 >>CCDS55790.1 UBE4A gene_id:9354|Hs108|chr11 (1066 aa) initn: 610 init1: 326 opt: 738 Z-score: 611.6 bits: 125.0 E(32554): 9.5e-28 Smith-Waterman score: 1060; 27.4% identity (59.7% similar) in 928 aa overlap (294-1169:170-1059) 270 280 290 300 310 320 pF1KB9 GASSLSSLGASGGASNWDSYSDHFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPA : .. :: ::.:. : :.:. : CCDS55 ARLLLQDPGNHLINMTSSTTLNLSADRDAGERHIFCYLYSCFQRAKEEITKVPENLLPFA 140 150 160 170 180 190 330 340 350 360 370 380 pF1KB9 V---SQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLVPYMLCRNLPYGFIQELVRTT : . .:: :. .. : :. : .:. .. .. ... :..:.... CCDS55 VQCRNLTVSNTRTVLLTPEIYVDQNIHEQLVDLMLEAIQGAHF--EDVTE-FLEEVIEAL 200 210 220 230 240 250 390 400 410 420 430 pF1KB9 HQDEEV--FKQIFIPILQGLALAAKECSLDSDYFKYPLMALGELCETKFGKTHPVCNLVA :::: : ...::... : : : . . :.: .. : . . . .. CCDS55 ILDEEVRTFPEVMIPVFDILLGRIK----DLELCQILLYAYLDIL-LYFTRQKDMAKVF- 260 270 280 290 300 310 440 450 460 470 480 490 pF1KB9 SLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVFAEDDVKVVEK--YFSGPAITL-ENTRV .. :: .: :. :. . ::...:.: . . :::. :: .:. . .. .: CCDS55 -VEYIQPK--DPTNGQMYQK-TLLGVILSISCLLKTP-GVVENHGYFLNPSRSSPQEIKV 320 330 340 350 360 500 510 520 530 540 pF1KB9 VSQSLQHYLELGRQELFKILHSIL-LNGETREAALSYMAAVVNANMKKAQMQTDD----- ...... .......:...: :. ::.. ::... ..:: .... ... CCDS55 QEANIHQFMAQFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIWANQMPEIF 370 380 390 400 410 420 550 560 570 580 590 600 pF1KB9 -RLVSTDGFMLNFLWVLQQLSTKI------KLETVDPTYIFHPRCRITLPNDETRV--NA .. ..:.:.::. .: .: . .: : .::: : . ::: : :. CCDS55 FQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTY-----CALKELNDEERKIKNV 430 440 450 460 470 480 610 620 630 640 650 660 pF1KB9 TMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT :. . : : : : .::::: . .: ...:. : :. : .. . CCDS55 HMRGL-DKETCLI---PAVQEPKFPQN---YNLVTENLA-LTEYTLYLGFHRLHDQMVKI 490 500 510 520 530 670 680 690 700 710 pF1KB9 VEDLKNNESQWKD-----SPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCL ..:. . :.: :: : :: :...:. . ... . ..:. :: CCDS55 NQNLHRLQVAWRDAQQSSSPAADNLRE-------QFERLMTIYLSTKTAMTEPQMLQNCL 540 550 560 570 580 720 730 740 750 760 770 pF1KB9 NFYGLLIQLLLRIL---DPAYP-DITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSP :. . ::... . . : ..:.:: : . .: .:::.......::.:. ... CCDS55 NLQVSMAVLLVQLAIGNEGSQPIELTFPL-PDGYSSLAYVPEFFADNLGDFLIFLRRFAD 590 600 610 620 630 640 780 790 800 810 820 pF1KB9 QALYEPCT--QDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQ----PRTQKFFE . : . .. :.... . . ..::.: :::.::. . : .. : ... :. CCDS55 DILETSADSLEHVLHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSVFH 650 660 670 680 690 700 830 840 850 860 870 pF1KB9 ---MIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLW------- .. : . .: . .:.: ..:.: :: .: .::. : . :.. .: CCDS55 RKRVFCNFQYAPQL-AEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRE 710 720 730 740 750 760 880 890 900 910 920 930 pF1KB9 --QNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWD ...: ... : . :.:..:.:.::. :::::... :..: ..:. :.. .:: CCDS55 SIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKI-KIQQIEKDRGEWD 770 780 790 800 810 820 940 950 960 970 980 990 pF1KB9 QLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLN .: . .. ... : . ...: . ...::. . .::..... :..: :. :. .::: CCDS55 SLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLN 830 840 850 860 870 880 1000 1010 1020 1030 1040 1050 pF1KB9 FNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQL-DCARFAKAIADDQRSYSKE . ::.: ::: :::.. .. :.:..:.... :::.: : : .. : :::: CCDS55 YFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPT 890 900 910 920 930 940 1060 1070 1080 1090 1100 1110 pF1KB9 LFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLM :: ... ..: . : : :. :::... .. . . : :.:: ::: ::.:.::: CCDS55 LFAQTVRVLKKIN-KPGNMIMAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLM 950 960 970 980 990 1000 1120 1130 1140 1150 1160 1170 pF1KB9 TDPVRLPSGTI-MDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMREKQNS ::: :::. . .::: : ::::.. ::::::. :: ....: ::::.:: :. :.. CCDS55 CDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQQ 1010 1020 1030 1040 1050 1060 pF1KB9 DH CCDS55 KEQLE >>CCDS8396.1 UBE4A gene_id:9354|Hs108|chr11 (1073 aa) initn: 610 init1: 326 opt: 738 Z-score: 611.6 bits: 125.0 E(32554): 9.6e-28 Smith-Waterman score: 1059; 27.3% identity (59.2% similar) in 932 aa overlap (294-1169:170-1066) 270 280 290 300 310 320 pF1KB9 GASSLSSLGASGGASNWDSYSDHFTIETCKETDMLNYLIECFDRVGIEEKKAPKMCSQPA : .. :: ::.:. : :.:. : CCDS83 ARLLLQDPGNHLINMTSSTTLNLSADRDAGERHIFCYLYSCFQRAKEEITKVPENLLPFA 140 150 160 170 180 190 330 340 350 360 370 pF1KB9 V---SQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLVPYMLCRNLPYG----FIQEL : . .:: :. .. : :. : .:. .. .. . :..:. CCDS83 VQCRNLTVSNTRTVLLTPEIYVDQNIHEQLVDLMLEAIQGAREYMNKIYFEDVTEFLEEV 200 210 220 230 240 250 380 390 400 410 420 430 pF1KB9 VRTTHQDEEV--FKQIFIPILQGLALAAKECSLDSDYFKYPLMALGELCETKFGKTHPVC ... :::: : ...::... : : : . . :.: .. : . . . CCDS83 IEALILDEEVRTFPEVMIPVFDILLGRIK----DLELCQILLYAYLDIL-LYFTRQKDMA 260 270 280 290 300 310 440 450 460 470 480 490 pF1KB9 NLVASLRLWLPKSLSPGCGRELQRLSYLGAFFSFSVFAEDDVKVVEK--YFSGPAITL-E .. .. :: .: :. :. . ::...:.: . . :::. :: .:. . . CCDS83 KVF--VEYIQPK--DPTNGQMYQK-TLLGVILSISCLLKTP-GVVENHGYFLNPSRSSPQ 320 330 340 350 360 500 510 520 530 540 pF1KB9 NTRVVSQSLQHYLELGRQELFKILHSIL-LNGETREAALSYMAAVVNANMKKAQMQTDD- . .: ...... .......:...: :. ::.. ::... ..:: .... ... CCDS83 EIKVQEANIHQFMAQFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIWANQM 370 380 390 400 410 420 550 560 570 580 590 pF1KB9 -----RLVSTDGFMLNFLWVLQQLSTKI------KLETVDPTYIFHPRCRITLPNDETRV .. ..:.:.::. .: .: . .: : .::: : . ::: : CCDS83 PEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTY-----CALKELNDEERK 430 440 450 460 470 480 600 610 620 630 640 650 pF1KB9 --NATMEDVNDWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRE :. :. . : : : : .::::: . .: ...:. : :. : . CCDS83 IKNVHMRGL-DKETCLI---PAVQEPKFPQN---YNLVTENLA-LTEYTLYLGFHRLHDQ 490 500 510 520 530 660 670 680 690 700 710 pF1KB9 LNRTVEDLKNNESQWKD-----SPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFL . . ..:. . :.: :: : :: :...:. . ... . ..: CCDS83 MVKINQNLHRLQVAWRDAQQSSSPAADNLRE-------QFERLMTIYLSTKTAMTEPQML 540 550 560 570 580 720 730 740 750 760 pF1KB9 RRCLNFYGLLIQLLLRIL---DPAYP-DITLPLNSDVPKVFAALPEFYVEDVAEFLFFIV . :::. . ::... . . : ..:.:: : . .: .:::.......::.:. CCDS83 QNCLNLQVSMAVLLVQLAIGNEGSQPIELTFPL-PDGYSSLAYVPEFFADNLGDFLIFLR 590 600 610 620 630 640 770 780 790 800 810 820 pF1KB9 QYSPQALYEPCT--QDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQ----PRTQ ... . : . .. :.... . . ..::.: :::.::. . : .. : .. CCDS83 RFADDILETSADSLEHVLHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPNPLVS 650 660 670 680 690 700 830 840 850 860 870 pF1KB9 KFFE---MIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLW--- . :. .. : . .: . .:.: ..:.: :: .: .::. : . :.. .: CCDS83 SVFHRKRVFCNFQYAPQL-AEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTD 710 720 730 740 750 760 880 890 900 910 920 pF1KB9 ------QNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNK ...: ... : . :.:..:.:.::. :::::... :..: ..:. :.. CCDS83 TYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKI-KIQQIEKDR 770 780 790 800 810 820 930 940 950 960 970 980 pF1KB9 EQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLA .::.: . .. ... : . ...: . ...::. . .::..... :..: :. :. CCDS83 GEWDSLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERII 830 840 850 860 870 880 990 1000 1010 1020 1030 1040 pF1KB9 AMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQL-DCARFAKAIADDQRS .:::. ::.: ::: :::.. .. :.:..:.... :::.: : : .. : :: CCDS83 SMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRS 890 900 910 920 930 940 1050 1060 1070 1080 1090 1100 pF1KB9 YSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLM :: :: ... ..: . : : :. :::... .. . . : :.:: ::: ::.: CCDS83 YSPTLFAQTVRVLKKIN-KPGNMIMAFSNLAERIKSLADLQQQEEETYADACDEFLDPIM 950 960 970 980 990 1000 1110 1120 1130 1140 1150 1160 pF1KB9 DTLMTDPVRLPSGTI-MDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQAWMRE .::: ::: :::. . .::: : ::::.. ::::::. :: ....: ::::.:: :. : CCDS83 STLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAE 1010 1020 1030 1040 1050 1060 1170 pF1KB9 KQNSDH .. CCDS83 RKQQKEQLE 1070 1173 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 07:02:10 2016 done: Sun Nov 6 07:02:11 2016 Total Scan time: 3.410 Total Display time: 0.150 Function used was FASTA [36.3.4 Apr, 2011]