FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1882, 401 aa 1>>>pF1KE1882 401 - 401 aa - 401 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0707+/-0.000976; mu= 8.9754+/- 0.059 mean_var=106.0194+/-21.603, 0's: 0 Z-trim(107.4): 20 B-trim: 66 in 1/52 Lambda= 0.124561 statistics sampled from 9572 (9582) to 9572 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.661), E-opt: 0.2 (0.294), width: 16 Scan time: 3.130 The best scores are: opt bits E(32554) CCDS58245.1 DCTN2 gene_id:10540|Hs108|chr12 ( 401) 2522 463.9 1.2e-130 CCDS73489.1 DCTN2 gene_id:10540|Hs108|chr12 ( 403) 2508 461.4 6.9e-130 CCDS44930.1 DCTN2 gene_id:10540|Hs108|chr12 ( 406) 2502 460.3 1.5e-129 >>CCDS58245.1 DCTN2 gene_id:10540|Hs108|chr12 (401 aa) initn: 2522 init1: 2522 opt: 2522 Z-score: 2459.0 bits: 463.9 E(32554): 1.2e-130 Smith-Waterman score: 2522; 100.0% identity (100.0% similar) in 401 aa overlap (1-401:1-401) 10 20 30 40 50 60 pF1KE1 MADPKYADLPGIARNEPDVYETSDLPEDDQAEFDAEELTSTSVEHIIVNPNAAYDKFKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MADPKYADLPGIARNEPDVYETSDLPEDDQAEFDAEELTSTSVEHIIVNPNAAYDKFKDK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 RVGTKGLDFSDRIGKTKRTGYESGEYEMLGEGLGVKETPQQKYQRLLHEVQELTTEVEKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 RVGTKGLDFSDRIGKTKRTGYESGEYEMLGEGLGVKETPQQKYQRLLHEVQELTTEVEKI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KTTVKESATEEKLTPVLLAKQLAALKQQLVASHLEKLLGPDAAINLTDPDGALAKRLLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 KTTVKESATEEKLTPVLLAKQLAALKQQLVASHLEKLLGPDAAINLTDPDGALAKRLLLQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 LEATKNSKGGSGGKTTGTPPDSSLVTYELHSRPEQDKFSQAAKVAELEKRLTELETAVRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LEATKNSKGGSGGKTTGTPPDSSLVTYELHSRPEQDKFSQAAKVAELEKRLTELETAVRC 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 DQDAQNPLSAGLQGACLMETVELLQAKVSALDLAVLDQVEARLQSVLGKVNEIAKHKASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 DQDAQNPLSAGLQGACLMETVELLQAKVSALDLAVLDQVEARLQSVLGKVNEIAKHKASV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 EDADTQSKVHQLYETIQRWSPIASTLPELVQRLVTIKQLHEQAMQFGQLLTHLDTTQQMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 EDADTQSKVHQLYETIQRWSPIASTLPELVQRLVTIKQLHEQAMQFGQLLTHLDTTQQMI 310 320 330 340 350 360 370 380 390 400 pF1KE1 ANSLKDNTTLLTQVQTTMRENLATVEGNFASIDERMKKLGK ::::::::::::::::::::::::::::::::::::::::: CCDS58 ANSLKDNTTLLTQVQTTMRENLATVEGNFASIDERMKKLGK 370 380 390 400 >>CCDS73489.1 DCTN2 gene_id:10540|Hs108|chr12 (403 aa) initn: 2281 init1: 2281 opt: 2508 Z-score: 2445.4 bits: 461.4 E(32554): 6.9e-130 Smith-Waterman score: 2508; 99.5% identity (99.5% similar) in 403 aa overlap (1-401:1-403) 10 20 30 40 50 pF1KE1 MADPKYADLPGIARNEPDVYETSDLPEDDQAEFDAE--ELTSTSVEHIIVNPNAAYDKFK :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: CCDS73 MADPKYADLPGIARNEPDVYETSDLPEDDQAEFDAELEELTSTSVEHIIVNPNAAYDKFK 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 DKRVGTKGLDFSDRIGKTKRTGYESGEYEMLGEGLGVKETPQQKYQRLLHEVQELTTEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 DKRVGTKGLDFSDRIGKTKRTGYESGEYEMLGEGLGVKETPQQKYQRLLHEVQELTTEVE 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 KIKTTVKESATEEKLTPVLLAKQLAALKQQLVASHLEKLLGPDAAINLTDPDGALAKRLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 KIKTTVKESATEEKLTPVLLAKQLAALKQQLVASHLEKLLGPDAAINLTDPDGALAKRLL 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 LQLEATKNSKGGSGGKTTGTPPDSSLVTYELHSRPEQDKFSQAAKVAELEKRLTELETAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 LQLEATKNSKGGSGGKTTGTPPDSSLVTYELHSRPEQDKFSQAAKVAELEKRLTELETAV 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE1 RCDQDAQNPLSAGLQGACLMETVELLQAKVSALDLAVLDQVEARLQSVLGKVNEIAKHKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 RCDQDAQNPLSAGLQGACLMETVELLQAKVSALDLAVLDQVEARLQSVLGKVNEIAKHKA 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE1 SVEDADTQSKVHQLYETIQRWSPIASTLPELVQRLVTIKQLHEQAMQFGQLLTHLDTTQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 SVEDADTQSKVHQLYETIQRWSPIASTLPELVQRLVTIKQLHEQAMQFGQLLTHLDTTQQ 310 320 330 340 350 360 360 370 380 390 400 pF1KE1 MIANSLKDNTTLLTQVQTTMRENLATVEGNFASIDERMKKLGK ::::::::::::::::::::::::::::::::::::::::::: CCDS73 MIANSLKDNTTLLTQVQTTMRENLATVEGNFASIDERMKKLGK 370 380 390 400 >>CCDS44930.1 DCTN2 gene_id:10540|Hs108|chr12 (406 aa) initn: 2508 init1: 2281 opt: 2502 Z-score: 2439.5 bits: 460.3 E(32554): 1.5e-129 Smith-Waterman score: 2502; 98.8% identity (98.8% similar) in 406 aa overlap (1-401:1-406) 10 20 30 40 50 pF1KE1 MADPKYADLPGIARNEPDVYETSDLPEDDQAEFDA-----EELTSTSVEHIIVNPNAAYD ::::::::::::::::::::::::::::::::::: :::::::::::::::::::: CCDS44 MADPKYADLPGIARNEPDVYETSDLPEDDQAEFDAFAQELEELTSTSVEHIIVNPNAAYD 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 KFKDKRVGTKGLDFSDRIGKTKRTGYESGEYEMLGEGLGVKETPQQKYQRLLHEVQELTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 KFKDKRVGTKGLDFSDRIGKTKRTGYESGEYEMLGEGLGVKETPQQKYQRLLHEVQELTT 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 EVEKIKTTVKESATEEKLTPVLLAKQLAALKQQLVASHLEKLLGPDAAINLTDPDGALAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EVEKIKTTVKESATEEKLTPVLLAKQLAALKQQLVASHLEKLLGPDAAINLTDPDGALAK 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE1 RLLLQLEATKNSKGGSGGKTTGTPPDSSLVTYELHSRPEQDKFSQAAKVAELEKRLTELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 RLLLQLEATKNSKGGSGGKTTGTPPDSSLVTYELHSRPEQDKFSQAAKVAELEKRLTELE 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE1 TAVRCDQDAQNPLSAGLQGACLMETVELLQAKVSALDLAVLDQVEARLQSVLGKVNEIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 TAVRCDQDAQNPLSAGLQGACLMETVELLQAKVSALDLAVLDQVEARLQSVLGKVNEIAK 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE1 HKASVEDADTQSKVHQLYETIQRWSPIASTLPELVQRLVTIKQLHEQAMQFGQLLTHLDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 HKASVEDADTQSKVHQLYETIQRWSPIASTLPELVQRLVTIKQLHEQAMQFGQLLTHLDT 310 320 330 340 350 360 360 370 380 390 400 pF1KE1 TQQMIANSLKDNTTLLTQVQTTMRENLATVEGNFASIDERMKKLGK :::::::::::::::::::::::::::::::::::::::::::::: CCDS44 TQQMIANSLKDNTTLLTQVQTTMRENLATVEGNFASIDERMKKLGK 370 380 390 400 401 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:03:11 2016 done: Sun Nov 6 21:03:12 2016 Total Scan time: 3.130 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]