Result of FASTA (omim) for pFN21AE1263
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1263, 607 aa
  1>>>pF1KE1263 607 - 607 aa - 607 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.8638+/-0.000566; mu= 9.7963+/- 0.035
 mean_var=381.9092+/-80.911, 0's: 0 Z-trim(114.4): 203  B-trim: 2380 in 2/57
 Lambda= 0.065629
 statistics sampled from 23937 (24181) to 23937 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.628), E-opt: 0.2 (0.284), width:  16
 Scan time: 11.530

The best scores are:                                      opt bits E(85289)
NP_110430 (OMIM: 610767,611081) autophagy-related  ( 607) 3996 393.8  9e-109
NP_001177195 (OMIM: 610767,611081) autophagy-relat ( 523) 3424 339.5 1.7e-92
NP_001177196 (OMIM: 610767,611081) autophagy-relat ( 491) 3223 320.5 8.7e-87
XP_005246143 (OMIM: 610767,611081) PREDICTED: auto ( 463) 2624 263.7   1e-69
NP_060444 (OMIM: 610767,611081) autophagy-related  ( 588) 2165 220.4 1.4e-56
XP_006712671 (OMIM: 610767,611081) PREDICTED: auto ( 540) 2161 220.0 1.7e-56
XP_005246139 (OMIM: 610767,611081) PREDICTED: auto ( 624) 2162 220.2 1.7e-56
NP_942593 (OMIM: 610767,611081) autophagy-related  ( 444) 2159 219.6 1.7e-56
XP_005246141 (OMIM: 610767,611081) PREDICTED: auto ( 480) 2158 219.6 1.9e-56
NP_004805 (OMIM: 607797) U5 small nuclear ribonucl ( 357)  476 60.1 1.5e-08
XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-c ( 334)  398 52.7 2.3e-06
NP_438172 (OMIM: 609012) WD repeat-containing prot ( 334)  398 52.7 2.3e-06
NP_060058 (OMIM: 609012) WD repeat-containing prot ( 334)  398 52.7 2.3e-06
NP_005877 (OMIM: 602703,616212) katanin p80 WD40 r ( 655)  334 47.1 0.00022
XP_016878353 (OMIM: 602703,616212) PREDICTED: kata ( 655)  334 47.1 0.00022
XP_016878352 (OMIM: 602703,616212) PREDICTED: kata ( 655)  334 47.1 0.00022
XP_006721186 (OMIM: 602703,616212) PREDICTED: kata ( 658)  334 47.1 0.00022
XP_005255829 (OMIM: 602703,616212) PREDICTED: kata ( 672)  334 47.1 0.00022
XP_016878351 (OMIM: 602703,616212) PREDICTED: kata ( 672)  334 47.1 0.00022
XP_016878350 (OMIM: 602703,616212) PREDICTED: kata ( 672)  334 47.1 0.00022
XP_006721184 (OMIM: 602703,616212) PREDICTED: kata ( 675)  334 47.1 0.00023
XP_011521112 (OMIM: 602703,616212) PREDICTED: kata ( 675)  334 47.1 0.00023
XP_016878349 (OMIM: 602703,616212) PREDICTED: kata ( 675)  334 47.1 0.00023
XP_006721185 (OMIM: 602703,616212) PREDICTED: kata ( 675)  334 47.1 0.00023
XP_016860391 (OMIM: 612173) PREDICTED: sperm-assoc ( 323)  320 45.3 0.00039
XP_016860390 (OMIM: 612173) PREDICTED: sperm-assoc ( 323)  320 45.3 0.00039
XP_016860389 (OMIM: 612173) PREDICTED: sperm-assoc ( 323)  320 45.3 0.00039
XP_011510137 (OMIM: 612173) PREDICTED: sperm-assoc ( 323)  320 45.3 0.00039
XP_016860387 (OMIM: 612173) PREDICTED: sperm-assoc ( 390)  320 45.4 0.00043
NP_006444 (OMIM: 605915) transducin beta-like prot ( 808)  324 46.3 0.00048
XP_016860385 (OMIM: 612173) PREDICTED: sperm-assoc ( 512)  320 45.6 0.00049
XP_016860386 (OMIM: 612173) PREDICTED: sperm-assoc ( 512)  320 45.6 0.00049
XP_011531865 (OMIM: 614783,614813) PREDICTED: POC1 ( 246)  314 44.5  0.0005
XP_011531867 (OMIM: 614783,614813) PREDICTED: POC1 ( 246)  314 44.5  0.0005
XP_011531866 (OMIM: 614783,614813) PREDICTED: POC1 ( 246)  314 44.5  0.0005
XP_011510125 (OMIM: 612173) PREDICTED: sperm-assoc ( 528)  320 45.6  0.0005
XP_011510124 (OMIM: 612173) PREDICTED: sperm-assoc ( 528)  320 45.6  0.0005
XP_011510123 (OMIM: 612173) PREDICTED: sperm-assoc ( 537)  320 45.7  0.0005
XP_011510121 (OMIM: 612173) PREDICTED: sperm-assoc ( 577)  320 45.7 0.00052
XP_011510116 (OMIM: 612173) PREDICTED: sperm-assoc ( 600)  320 45.7 0.00053
NP_078808 (OMIM: 612173) sperm-associated antigen  ( 631)  320 45.8 0.00054
NP_056975 (OMIM: 605585) pre-mRNA-processing facto ( 579)  305 44.3  0.0014
NP_006089 (OMIM: 176981) receptor of activated pro ( 317)  290 42.4  0.0027
NP_001093207 (OMIM: 616850) WD repeat domain-conta ( 315)  288 42.3  0.0031
NP_115708 (OMIM: 616850) WD repeat domain-containi ( 315)  288 42.3  0.0031
XP_011530390 (OMIM: 606278) PREDICTED: F-box/WD re ( 540)  291 42.9  0.0034
NP_001013433 (OMIM: 606278) F-box/WD repeat-contai ( 589)  291 43.0  0.0035
NP_060785 (OMIM: 606278) F-box/WD repeat-containin ( 627)  291 43.0  0.0036
XP_011530388 (OMIM: 606278) PREDICTED: F-box/WD re ( 679)  291 43.1  0.0038
XP_011530389 (OMIM: 606278) PREDICTED: F-box/WD re ( 679)  291 43.1  0.0038


>>NP_110430 (OMIM: 610767,611081) autophagy-related prot  (607 aa)
 initn: 3996 init1: 3996 opt: 3996  Z-score: 2073.8  bits: 393.8 E(85289): 9e-109
Smith-Waterman score: 3996; 100.0% identity (100.0% similar) in 607 aa overlap (1-607:1-607)

               10        20        30        40        50        60
pF1KE1 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 HDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 HDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 HPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 HPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKG
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE1 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE1 IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE1 VFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 VFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCK
              550       560       570       580       590       600

              
pF1KE1 AVLWAQY
       :::::::
NP_110 AVLWAQY
              

>>NP_001177195 (OMIM: 610767,611081) autophagy-related p  (523 aa)
 initn: 3424 init1: 3424 opt: 3424  Z-score: 1781.7  bits: 339.5 E(85289): 1.7e-92
Smith-Waterman score: 3424; 100.0% identity (100.0% similar) in 523 aa overlap (85-607:1-523)

           60        70        80        90       100       110    
pF1KE1 KLQAEKHDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLN
                                     ::::::::::::::::::::::::::::::
NP_001                               MAQLRIKHQEELTELHKKRGELAQLVIDLN
                                             10        20        30

          120       130       140       150       160       170    
pF1KE1 NQMQRKDREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NQMQRKDREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFT
               40        50        60        70        80        90

          180       190       200       210       220       230    
pF1KE1 ALEGKLRKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALEGKLRKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPV
              100       110       120       130       140       150

          240       250       260       270       280       290    
pF1KE1 EQDDDIEVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQDDDIEVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVP
              160       170       180       190       200       210

          300       310       320       330       340       350    
pF1KE1 QDNVDTHPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDNVDTHPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGE
              220       230       240       250       260       270

          360       370       380       390       400       410    
pF1KE1 KCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSA
              280       290       300       310       320       330

          420       430       440       450       460       470    
pF1KE1 KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFW
              340       350       360       370       380       390

          480       490       500       510       520       530    
pF1KE1 DIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCG
              400       410       420       430       440       450

          540       550       560       570       580       590    
pF1KE1 SDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVS
              460       470       480       490       500       510

          600       
pF1KE1 VDKGCKAVLWAQY
       :::::::::::::
NP_001 VDKGCKAVLWAQY
              520   

>>NP_001177196 (OMIM: 610767,611081) autophagy-related p  (491 aa)
 initn: 3223 init1: 3223 opt: 3223  Z-score: 1679.1  bits: 320.5 E(85289): 8.7e-87
Smith-Waterman score: 3223; 100.0% identity (100.0% similar) in 491 aa overlap (117-607:1-491)

         90       100       110       120       130       140      
pF1KE1 QLRIKHQEELTELHKKRGELAQLVIDLNNQMQRKDREMQMNEAKIAECLQTISDLETECL
                                     ::::::::::::::::::::::::::::::
NP_001                               MQRKDREMQMNEAKIAECLQTISDLETECL
                                             10        20        30

        150       160       170       180       190       200      
pF1KE1 DLRTKLCDLERANQTLKDEYDALQITFTALEGKLRKTTEENQELVTRWMAEKAQEANRLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLRTKLCDLERANQTLKDEYDALQITFTALEGKLRKTTEENQELVTRWMAEKAQEANRLN
               40        50        60        70        80        90

        210       220       230       240       250       260      
pF1KE1 AENEKDSRRRQARLQKELAEAAKEPLPVEQDDDIEVIVDETSDHTEETSPVRAISRAATK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AENEKDSRRRQARLQKELAEAAKEPLPVEQDDDIEVIVDETSDHTEETSPVRAISRAATK
              100       110       120       130       140       150

        270       280       290       300       310       320      
pF1KE1 RLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDTHPGSGKEVRVPATALCVFDAHDGEVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDTHPGSGKEVRVPATALCVFDAHDGEVN
              160       170       180       190       200       210

        330       340       350       360       370       380      
pF1KE1 AVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASN
              220       230       240       250       260       270

        390       400       410       420       430       440      
pF1KE1 DFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTV
              280       290       300       310       320       330

        450       460       470       480       490       500      
pF1KE1 FAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSC
              340       350       360       370       380       390

        510       520       530       540       550       560      
pF1KE1 SRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTG
              400       410       420       430       440       450

        570       580       590       600       
pF1KE1 KVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQY
       :::::::::::::::::::::::::::::::::::::::::
NP_001 KVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWAQY
              460       470       480       490 

>>XP_005246143 (OMIM: 610767,611081) PREDICTED: autophag  (463 aa)
 initn: 2617 init1: 2617 opt: 2624  Z-score: 1372.8  bits: 263.7 E(85289): 1e-69
Smith-Waterman score: 2761; 76.3% identity (76.3% similar) in 607 aa overlap (1-607:1-463)

               10        20        30        40        50        60
pF1KE1 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 HDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
       :::::::::                                                   
XP_005 HDVPNRHEI---------------------------------------------------
                                                                   

              130       140       150       160       170       180
pF1KE1 DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
                                                                   
XP_005 ------------------------------------------------------------
                                                                   

              190       200       210       220       230       240
pF1KE1 RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
                                        :::::::::::::::::::::::::::
XP_005 ---------------------------------RRRQARLQKELAEAAKEPLPVEQDDDI
                                       70        80        90      

              250       260       270       280       290       300
pF1KE1 EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDT
        100       110       120       130       140       150      

              310       320       330       340       350       360
pF1KE1 HPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKG
        160       170       180       190       200       210      

              370       380       390       400       410       420
pF1KE1 SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
        220       230       240       250       260       270      

              430       440       450       460       470       480
pF1KE1 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
        280       290       300       310       320       330      

              490       500       510       520       530       540
pF1KE1 IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRV
        340       350       360       370       380       390      

              550       560       570       580       590       600
pF1KE1 VFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCK
        400       410       420       430       440       450      

              
pF1KE1 AVLWAQY
       :::::::
XP_005 AVLWAQY
        460   

>>NP_060444 (OMIM: 610767,611081) autophagy-related prot  (588 aa)
 initn: 2158 init1: 2158 opt: 2165  Z-score: 1137.0  bits: 220.4 E(85289): 1.4e-56
Smith-Waterman score: 3826; 96.9% identity (96.9% similar) in 607 aa overlap (1-607:1-588)

               10        20        30        40        50        60
pF1KE1 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 HDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 HDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDT
       :::::::::::::::::::::::::                   ::::::::::::::::
NP_060 EVIVDETSDHTEETSPVRAISRAAT-------------------RRSVSSFPVPQDNVDT
              250       260                          270       280 

              310       320       330       340       350       360
pF1KE1 HPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 HPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKG
             290       300       310       320       330       340 

              370       380       390       400       410       420
pF1KE1 SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
             350       360       370       380       390       400 

              430       440       450       460       470       480
pF1KE1 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
             410       420       430       440       450       460 

              490       500       510       520       530       540
pF1KE1 IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRV
             470       480       490       500       510       520 

              550       560       570       580       590       600
pF1KE1 VFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 VFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCK
             530       540       550       560       570       580 

              
pF1KE1 AVLWAQY
       :::::::
NP_060 AVLWAQY
              

>>XP_006712671 (OMIM: 610767,611081) PREDICTED: autophag  (540 aa)
 initn: 3010 init1: 2158 opt: 2161  Z-score: 1135.3  bits: 220.0 E(85289): 1.7e-56
Smith-Waterman score: 3240; 83.8% identity (83.8% similar) in 624 aa overlap (1-607:1-540)

               10        20        30        40        50        60
pF1KE1 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 HDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
       ::::::::::                                                  
XP_006 DREMQMNEAK--------------------------------------------------
              130                                                  

              190       200       210       220       230       240
pF1KE1 RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
                                         ::::::::::::::::::::::::::
XP_006 ----------------------------------RRQARLQKELAEAAKEPLPVEQDDDI
                                                140       150      

              250       260       270       280                    
pF1KE1 EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFG----------------
       ::::::::::::::::::::::::::::::::::::::::::::                
XP_006 EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSSDAA
        160       170       180       190       200       210      

           290       300       310       320       330       340   
pF1KE1 -RRSVSSFPVPQDNVDTHPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMD
        :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RRRSVSSFPVPQDNVDTHPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMD
        220       230       240       250       260       270      

           350       360       370       380       390       400   
pF1KE1 RRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHT
        280       290       300       310       320       330      

           410       420       430       440       450       460   
pF1KE1 LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
        340       350       360       370       380       390      

           470       480       490       500       510       520   
pF1KE1 SGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIK
        400       410       420       430       440       450      

           530       540       550       560       570       580   
pF1KE1 QTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAV
        460       470       480       490       500       510      

           590       600       
pF1KE1 AWSPSGSHVVSVDKGCKAVLWAQY
       ::::::::::::::::::::::::
XP_006 AWSPSGSHVVSVDKGCKAVLWAQY
        520       530       540

>>XP_005246139 (OMIM: 610767,611081) PREDICTED: autophag  (624 aa)
 initn: 3982 init1: 2158 opt: 2162  Z-score: 1135.2  bits: 220.2 E(85289): 1.7e-56
Smith-Waterman score: 3952; 97.3% identity (97.3% similar) in 624 aa overlap (1-607:1-624)

               10        20        30        40        50        60
pF1KE1 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 HDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
              190       200       210       220       230       240

              250       260       270       280                    
pF1KE1 EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFG----------------
       ::::::::::::::::::::::::::::::::::::::::::::                
XP_005 EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSSDAA
              250       260       270       280       290       300

           290       300       310       320       330       340   
pF1KE1 -RRSVSSFPVPQDNVDTHPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMD
        :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RRRSVSSFPVPQDNVDTHPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMD
              310       320       330       340       350       360

           350       360       370       380       390       400   
pF1KE1 RRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHT
              370       380       390       400       410       420

           410       420       430       440       450       460   
pF1KE1 LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
              430       440       450       460       470       480

           470       480       490       500       510       520   
pF1KE1 SGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIK
              490       500       510       520       530       540

           530       540       550       560       570       580   
pF1KE1 QTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAV
              550       560       570       580       590       600

           590       600       
pF1KE1 AWSPSGSHVVSVDKGCKAVLWAQY
       ::::::::::::::::::::::::
XP_005 AWSPSGSHVVSVDKGCKAVLWAQY
              610       620    

>>NP_942593 (OMIM: 610767,611081) autophagy-related prot  (444 aa)
 initn: 2600 init1: 2158 opt: 2159  Z-score: 1135.1  bits: 219.6 E(85289): 1.7e-56
Smith-Waterman score: 2591; 73.1% identity (73.1% similar) in 607 aa overlap (1-607:1-444)

               10        20        30        40        50        60
pF1KE1 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_942 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 HDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
       :::::::::                                                   
NP_942 HDVPNRHEI---------------------------------------------------
                                                                   

              130       140       150       160       170       180
pF1KE1 DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
                                                                   
NP_942 ------------------------------------------------------------
                                                                   

              190       200       210       220       230       240
pF1KE1 RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
                                        :::::::::::::::::::::::::::
NP_942 ---------------------------------RRRQARLQKELAEAAKEPLPVEQDDDI
                                       70        80        90      

              250       260       270       280       290       300
pF1KE1 EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDT
       :::::::::::::::::::::::::                   ::::::::::::::::
NP_942 EVIVDETSDHTEETSPVRAISRAAT-------------------RRSVSSFPVPQDNVDT
        100       110       120                          130       

              310       320       330       340       350       360
pF1KE1 HPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_942 HPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKG
       140       150       160       170       180       190       

              370       380       390       400       410       420
pF1KE1 SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_942 SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
       200       210       220       230       240       250       

              430       440       450       460       470       480
pF1KE1 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_942 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
       260       270       280       290       300       310       

              490       500       510       520       530       540
pF1KE1 IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_942 IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRV
       320       330       340       350       360       370       

              550       560       570       580       590       600
pF1KE1 VFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_942 VFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCK
       380       390       400       410       420       430       

              
pF1KE1 AVLWAQY
       :::::::
NP_942 AVLWAQY
       440    

>>XP_005246141 (OMIM: 610767,611081) PREDICTED: autophag  (480 aa)
 initn: 2603 init1: 2158 opt: 2158  Z-score: 1134.2  bits: 219.6 E(85289): 1.9e-56
Smith-Waterman score: 2717; 74.2% identity (74.2% similar) in 624 aa overlap (1-607:1-480)

               10        20        30        40        50        60
pF1KE1 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 HDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
       :::::::::                                                   
XP_005 HDVPNRHEI---------------------------------------------------
                                                                   

              130       140       150       160       170       180
pF1KE1 DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
                                                                   
XP_005 ------------------------------------------------------------
                                                                   

              190       200       210       220       230       240
pF1KE1 RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
                                        :::::::::::::::::::::::::::
XP_005 ---------------------------------RRRQARLQKELAEAAKEPLPVEQDDDI
                                       70        80        90      

              250       260       270       280                    
pF1KE1 EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFG----------------
       ::::::::::::::::::::::::::::::::::::::::::::                
XP_005 EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSSDAA
        100       110       120       130       140       150      

           290       300       310       320       330       340   
pF1KE1 -RRSVSSFPVPQDNVDTHPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMD
        :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RRRSVSSFPVPQDNVDTHPGSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMD
        160       170       180       190       200       210      

           350       360       370       380       390       400   
pF1KE1 RRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHT
        220       230       240       250       260       270      

           410       420       430       440       450       460   
pF1KE1 LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
        280       290       300       310       320       330      

           470       480       490       500       510       520   
pF1KE1 SGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIK
        340       350       360       370       380       390      

           530       540       550       560       570       580   
pF1KE1 QTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAV
        400       410       420       430       440       450      

           590       600       
pF1KE1 AWSPSGSHVVSVDKGCKAVLWAQY
       ::::::::::::::::::::::::
XP_005 AWSPSGSHVVSVDKGCKAVLWAQY
        460       470       480

>>NP_004805 (OMIM: 607797) U5 small nuclear ribonucleopr  (357 aa)
 initn: 383 init1: 131 opt: 476  Z-score: 274.7  bits: 60.1 E(85289): 1.5e-08
Smith-Waterman score: 480; 30.4% identity (62.7% similar) in 319 aa overlap (302-594:32-344)

             280       290       300       310                     
pF1KE1 AGGLLDSITNIFGRRSVSSFPVPQDNVDTHPGSGKEVRVPATAL------C--------V
                                     ::.:..  .:.. :      :        .
NP_004 IEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIML
              10        20        30        40        50        60 

       320       330       340       350       360       370       
pF1KE1 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSA
       ...:.:::   .: :..  ::..:.:: . ::.:.:. :.  ..:.: ....  ..... 
NP_004 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD
              70        80        90        100       110       120

       380       390       400       410       420        430      
pF1KE1 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLWD
       ::.:..::.: .  .:  .  .  . : ::.. : :      . ..: .:: : :.::::
NP_004 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD
              130       140       150       160       170       180

        440       450             460       470       480          
pF1KE1 LRSKVCIKTVFAGS------SCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-LLG
       .:.:. :.: : ..      . ::   : . ..:: .:. :. ::.:.....  :.    
NP_004 IRKKAAIQT-FQNTYQVLAVTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD
               190       200          210       220       230      

     490       500       510       520           530       540     
pF1KE1 KITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQT----FSAPGFKCGSDWTRVVFSPD
       ..:.:.:. : . ::: . :. ..: :.:  : :.     :..   .  ..  :  .:::
NP_004 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD
        240       250       260       270       280       290      

         550       560       570       580       590       600     
pF1KE1 GSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWA
       :: .:::::.  .:.:.. . ..   :   :..::: ::. :.   ..:           
NP_004 GSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPDEPIIISASSDKRLYMGE
        300       310       320        330       340       350     

         
pF1KE1 QY
         
NP_004 IQ
         




607 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 21:38:10 2016 done: Sun Nov  6 21:38:12 2016
 Total Scan time: 11.530 Total Display time:  0.120

Function used was FASTA [36.3.4 Apr, 2011]
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