Result of FASTA (omim) for
pFN21AE1842
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1842, 358 aa
1>>>pF1KE1842 358 - 358 aa - 358 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 11.4511+/-0.000382; mu= -8.1739+/- 0.024
mean_var=471.1586+/-100.524, 0's: 0 Z-trim(126.6): 15 B-trim: 2683 in 2/57
Lambda= 0.059087
statistics sampled from 52916 (52942) to 52916 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.852), E-opt: 0.2 (0.621), width: 16
Scan time: 9.970
The best scores are: opt bits E(85289)
NP_004355 (OMIM: 116897,601626) CCAAT/enhancer-bin ( 358) 2526 228.8 1.5e-59
NP_001274353 (OMIM: 116897,601626) CCAAT/enhancer- ( 393) 2526 228.8 1.6e-59
NP_001274364 (OMIM: 116897,601626) CCAAT/enhancer- ( 344) 2425 220.1 5.6e-57
NP_001272758 (OMIM: 116897,601626) CCAAT/enhancer- ( 239) 1677 156.2 6.9e-38
NP_001272807 (OMIM: 189965) CCAAT/enhancer-binding ( 322) 462 52.8 1.3e-06
NP_005185 (OMIM: 189965) CCAAT/enhancer-binding pr ( 345) 462 52.8 1.3e-06
NP_001272808 (OMIM: 189965) CCAAT/enhancer-binding ( 147) 412 48.2 1.4e-05
NP_001796 (OMIM: 245480,600749) CCAAT/enhancer-bin ( 281) 412 48.5 2.2e-05
NP_005186 (OMIM: 116898) CCAAT/enhancer-binding pr ( 269) 361 44.1 0.00044
>>NP_004355 (OMIM: 116897,601626) CCAAT/enhancer-binding (358 aa)
initn: 2526 init1: 2526 opt: 2526 Z-score: 1190.2 bits: 228.8 E(85289): 1.5e-59
Smith-Waterman score: 2526; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)
10 20 30 40 50 60
pF1KE1 MESADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEPLGGICEHET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MESADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEPLGGICEHET
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 SIDISAYIDPAAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SIDISAYIDPAAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 PGGAHGPPPGYGCAAAGYLDGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 PGGAHGPPPGYGCAAAGYLDGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLFP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 YQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTPVPSPHPAPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 YQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTPVPSPHPAPA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 LGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVRKSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 LGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVRKSR
250 260 270 280 290 300
310 320 330 340 350
pF1KE1 DKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 DKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCA
310 320 330 340 350
>>NP_001274353 (OMIM: 116897,601626) CCAAT/enhancer-bind (393 aa)
initn: 2526 init1: 2526 opt: 2526 Z-score: 1189.7 bits: 228.8 E(85289): 1.6e-59
Smith-Waterman score: 2526; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:36-393)
10 20 30
pF1KE1 MESADFYEAEPRPPMSSHLQSPPHAPSSAA
::::::::::::::::::::::::::::::
NP_001 RAGSPGGRRRRPAQAGGRRGSPCRENSNSPMESADFYEAEPRPPMSSHLQSPPHAPSSAA
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE1 FGFPRGAGPAQPPAPPAAPEPLGGICEHETSIDISAYIDPAAFNDEFLADLFQHSRQQEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FGFPRGAGPAQPPAPPAAPEPLGGICEHETSIDISAYIDPAAFNDEFLADLFQHSRQQEK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE1 AKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPGGAHGPPPGYGCAAAGYLDGRLEPLYERV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPGGAHGPPPGYGCAAAGYLDGRLEPLYERV
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE1 GAPALRPLVIKQEPREEDEAKQLALAGLFPYQPPPPPPPSHPHPHPPPAHLAAPHLQFQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAPALRPLVIKQEPREEDEAKQLALAGLFPYQPPPPPPPSHPHPHPPPAHLAAPHLQFQI
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE1 AHCGQTTMHLQPGHPTPPPTPVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHCGQTTMHLQPGHPTPPPTPVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGSG
250 260 270 280 290 300
280 290 300 310 320 330
pF1KE1 AGKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AGKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQ
310 320 330 340 350 360
340 350
pF1KE1 LSRELDTLRGIFRQLPESSLVKAMGNCA
::::::::::::::::::::::::::::
NP_001 LSRELDTLRGIFRQLPESSLVKAMGNCA
370 380 390
>>NP_001274364 (OMIM: 116897,601626) CCAAT/enhancer-bind (344 aa)
initn: 2425 init1: 2425 opt: 2425 Z-score: 1143.9 bits: 220.1 E(85289): 5.6e-57
Smith-Waterman score: 2425; 100.0% identity (100.0% similar) in 344 aa overlap (15-358:1-344)
10 20 30 40 50 60
pF1KE1 MESADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEPLGGICEHET
::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEPLGGICEHET
10 20 30 40
70 80 90 100 110 120
pF1KE1 SIDISAYIDPAAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIDISAYIDPAAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVM
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE1 PGGAHGPPPGYGCAAAGYLDGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLFP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGGAHGPPPGYGCAAAGYLDGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLFP
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE1 YQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTPVPSPHPAPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPTPVPSPHPAPA
170 180 190 200 210 220
250 260 270 280 290 300
pF1KE1 LGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVRKSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVRKSR
230 240 250 260 270 280
310 320 330 340 350
pF1KE1 DKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCA
290 300 310 320 330 340
>>NP_001272758 (OMIM: 116897,601626) CCAAT/enhancer-bind (239 aa)
initn: 1677 init1: 1677 opt: 1677 Z-score: 801.2 bits: 156.2 E(85289): 6.9e-38
Smith-Waterman score: 1677; 100.0% identity (100.0% similar) in 239 aa overlap (120-358:1-239)
90 100 110 120 130 140
pF1KE1 KAKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPGGAHGPPPGYGCAAAGYLDGRLEPLYER
::::::::::::::::::::::::::::::
NP_001 MPGGAHGPPPGYGCAAAGYLDGRLEPLYER
10 20 30
150 160 170 180 190 200
pF1KE1 VGAPALRPLVIKQEPREEDEAKQLALAGLFPYQPPPPPPPSHPHPHPPPAHLAAPHLQFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VGAPALRPLVIKQEPREEDEAKQLALAGLFPYQPPPPPPPSHPHPHPPPAHLAAPHLQFQ
40 50 60 70 80 90
210 220 230 240 250 260
pF1KE1 IAHCGQTTMHLQPGHPTPPPTPVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IAHCGQTTMHLQPGHPTPPPTPVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGS
100 110 120 130 140 150
270 280 290 300 310 320
pF1KE1 GAGKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAGKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVE
160 170 180 190 200 210
330 340 350
pF1KE1 QLSRELDTLRGIFRQLPESSLVKAMGNCA
:::::::::::::::::::::::::::::
NP_001 QLSRELDTLRGIFRQLPESSLVKAMGNCA
220 230
>>NP_001272807 (OMIM: 189965) CCAAT/enhancer-binding pro (322 aa)
initn: 597 init1: 385 opt: 462 Z-score: 239.9 bits: 52.8 E(85289): 1.3e-06
Smith-Waterman score: 529; 37.6% identity (54.0% similar) in 359 aa overlap (28-357:14-322)
10 20 30 40 50
pF1KE1 MESADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAAPEP----LGGIC
.::.: :.:: ::: .:.: ::.:
NP_001 MEVANFYYEADCLAAAYGGK--AAPAAPPAARPGPRPPAGELGSIG
10 20 30 40
60 70 80 90 100 110
pF1KE1 EHETSIDISAYIDP----AAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAP
.:: .::.: :..: : .: : : : : .:. ...: :. .
NP_001 DHERAIDFSPYLEPLGAPQAPAPATATDTF------EAAPPAPAPAPASSGQHHDFLSDL
50 60 70 80 90
120 130 140 150 160 170
pF1KE1 AGPGGAVMPGGAHGPPPGYGCAAAGYLD-GRLEPLYERVGAPALRPLVIKQEPREEDEAK
. :: . : : ::.. ::: :: ::
NP_001 FSDDY----GGKNCKKP----AEYGYVSLGRL-------GA-----------------AK
100 110 120
180 190 200 210 220 230
pF1KE1 QLALAGLF-PYQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTPPPT
: : : .::::::: :::.: : :. : : . :: . .
NP_001 GALHPGCFAPLHPPPPPPP-------PPAELKAEP-GFEPADCKRKEEAGAPGGGAGMAA
130 140 150 160 170
240 250 260 270
pF1KE1 PVPSPHPAPALGAAGLPG--------------PGSALKGLGAAHPDLRASGGSGA-----
: : :: ..:. ::. . . : : .:.. :
NP_001 GFPYALRA-YLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAKAPPTACYAGAAPAPSQVK
180 190 200 210 220 230
280 290 300 310 320 330
pF1KE1 GKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQL
.::::.:::.:.::..:::::::::::::::::.::.:::.::::::..:.::.:.::::
NP_001 SKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQL
240 250 260 270 280 290
340 350
pF1KE1 SRELDTLRGIFRQLPESSLVKAMGNCA
::::.:::..:.:::: :. . :.:
NP_001 SRELSTLRNLFKQLPEP-LLASSGHC
300 310 320
>>NP_005185 (OMIM: 189965) CCAAT/enhancer-binding protei (345 aa)
initn: 597 init1: 385 opt: 462 Z-score: 239.5 bits: 52.8 E(85289): 1.3e-06
Smith-Waterman score: 530; 36.1% identity (53.0% similar) in 379 aa overlap (11-357:16-345)
10 20 30 40 50
pF1KE1 MESADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAGPAQPPAPPAA---PEP-
: :: . .. . .. : : : : ::::: :.:
NP_005 MQRLVAWDPACLPLPPPPPAFKSMEVANFYYEADCLAAAYG-GKAAPAAPPAARPGPRPP
10 20 30 40 50
60 70 80 90 100
pF1KE1 ---LGGICEHETSIDISAYIDP----AAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGG
::.: .:: .::.: :..: : .: : : : : .:. ...:
NP_005 AGELGSIGDHERAIDFSPYLEPLGAPQAPAPATATDTF------EAAPPAPAPAPASSGQ
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE1 DFDYPGAPAGPGGAVMPGGAHGPPPGYGCAAAGYLD-GRLEPLYERVGAPALRPLVIKQE
:. . . :: . : : ::.. ::: .. ::.:
NP_005 HHDFLSDLFSDDY----GGKNCKKP----AEYGYVSLGRLG-----AAKGALHP------
120 130 140 150
170 180 190 200 210 220
pF1KE1 PREEDEAKQLALAGLF-PYQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQP
: : : .::::::: :::.: : :. : : . :
NP_005 -------------GCFAPLHPPPPPPP-------PPAELKAEP-GFEPADCKRKEEAGAP
160 170 180 190
230 240 250 260
pF1KE1 GHPTPPPTPVPSPHPAPALGAAGLPG--------------PGSALKGLGAAHPDLRASGG
: . . : : :: ..:. ::. . . : : .:.
NP_005 GGGAGMAAGFPYALRA-YLGYQAVPSGSSGSLSTSSSSSPPGTPSPADAKAPPTACYAGA
200 210 220 230 240 250
270 280 290 300 310 320
pF1KE1 SGA-----GKAKKSVDKNSNEYRVRRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDR
. : .::::.:::.:.::..:::::::::::::::::.::.:::.::::::..:.:
NP_005 APAPSQVKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENER
260 270 280 290 300 310
330 340 350
pF1KE1 LRKRVEQLSRELDTLRGIFRQLPESSLVKAMGNCA
:.:.::::::::.:::..:.:::: :. . :.:
NP_005 LQKKVEQLSRELSTLRNLFKQLPEP-LLASSGHC
320 330 340
>>NP_001272808 (OMIM: 189965) CCAAT/enhancer-binding pro (147 aa)
initn: 492 init1: 385 opt: 412 Z-score: 221.0 bits: 48.2 E(85289): 1.4e-05
Smith-Waterman score: 427; 48.1% identity (69.4% similar) in 160 aa overlap (198-357:6-147)
170 180 190 200 210 220
pF1KE1 DEAKQLALAGLFPYQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTP
: : : .: .: . :.. . .:
NP_001 MAAGFPYALRA-YLGYQAVPSGSSGSLSTSSSSSP
10 20 30
230 240 250 260 270 280
pF1KE1 PPTPVPSPHPAPALGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRV
: :: :. :: : . : . : .... ::::.:::.:.::..
NP_001 PGTPSPADAKAP---------PTACYAGAAPAPSQVKS-------KAKKTVDKHSDEYKI
40 50 60 70
290 300 310 320 330 340
pF1KE1 RRERNNIAVRKSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPE
:::::::::::::::::.::.:::.::::::..:.::.:.::::::::.:::..:.::::
NP_001 RRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPE
80 90 100 110 120 130
350
pF1KE1 SSLVKAMGNCA
:. . :.:
NP_001 P-LLASSGHC
140
>>NP_001796 (OMIM: 245480,600749) CCAAT/enhancer-binding (281 aa)
initn: 571 init1: 352 opt: 412 Z-score: 217.5 bits: 48.5 E(85289): 2.2e-05
Smith-Waterman score: 580; 40.7% identity (59.3% similar) in 332 aa overlap (34-358:11-281)
10 20 30 40 50 60
pF1KE1 ADFYEAEPRPPMSSHLQSPPHAPSSAAFGFPRGAG-PAQPPAPPAAPEPLGGICEHETSI
:::. : . . :.: :: .::::.::
NP_001 MSHGTYYECEPRGGQQPLEFSGGRAGPGELGDMCEHEASI
10 20 30 40
70 80 90 100 110 120
pF1KE1 DISAYIDPAAFNDEFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPG
:.::::. . ....:.::: :: :. . : . ::.:: : .:
NP_001 DLSAYIESG--EEQLLSDLF-----------AVKPAPEARG--LKGPGTPAFPH--YLPP
50 60 70 80
130 140 150 160 170
pF1KE1 GAHG---PPPGYGCAAAGYLDGRLEPLYERVGAPALRPLVIKQEPREEDEAKQLALAGLF
. :: .: . : .: :. : ...:.::: :... : :
NP_001 DPRPFAYPPHTFGPDRKALGPG----IYSSPGSYDPRAVAVKEEPRGP-EGSRAASRG--
90 100 110 120 130
180 190 200 210 220 230
pF1KE1 PYQPPPPPPPSHPHPHPPPAHLAAPHLQFQIAHCGQTTMHLQPGHPTP-PPTPVPSPHPA
:.: ::.:.::::::.::: : .: : : :
NP_001 SYNP----------------------LQYQVAHCGQTAMHLPPTLAAPGQPLRV---LKA
140 150 160 170
240 250 260 270 280 290
pF1KE1 PALGAAGLPGPGSALKGLGAAHPDLRASGGSGA-GKAKKSVDKNSNEYRVRRERNNIAVR
: :: : : : : :.: . .: :.::.:.:.: :::.::::::::::
NP_001 PLATAA--P-PCS---------PLLKAPSPAGPLHKGKKAVNKDSLEYRLRRERNNIAVR
180 190 200 210
300 310 320 330 340 350
pF1KE1 KSRDKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESS-LVKAMGN
:::::::.: .:::::::: ..:.:::.:::::..::::::..:::.::.. :.:..:.
NP_001 KSRDKAKRRILETQQKVLEYMAENERLRSRVEQLTQELDTLRNLFRQIPEAANLIKGVGG
220 230 240 250 260 270
pF1KE1 CA
:.
NP_001 CS
280
>>NP_005186 (OMIM: 116898) CCAAT/enhancer-binding protei (269 aa)
initn: 484 init1: 293 opt: 361 Z-score: 194.3 bits: 44.1 E(85289): 0.00044
Smith-Waterman score: 425; 38.1% identity (55.9% similar) in 270 aa overlap (106-357:24-268)
80 90 100 110 120 130
pF1KE1 EFLADLFQHSRQQEKAKAAVGPTGGGGGGDFDYPGAPAGPGGAVMPGGAHGPPPGYGCAA
: :: . :: .. :: : : : : ::
NP_005 MSAALFSLDGPARGAPWPAEPAPFYEPGRAGKPGRGAEPG-ALGEP---GAAA
10 20 30 40
140 150 160 170 180
pF1KE1 -AGYLDGRLEPLYERVGAPALRP-LVIKQEPREEDEAKQLALAG------LFPYQPPPP-
: : : . . . : : : . .. : .. :: :.: : :
NP_005 PAMYDDESAIDFSAYIDSMAAVPTLELCHDELFADLFNSNHKAGGAGPLELLPGGPARPL
50 60 70 80 90 100
190 200 210 220 230
pF1KE1 -PPPSHPH---PHPPPAHLAAPH--LQFQIAHCGQTTMHLQP-GHPTPPPTPVPSPHPAP
: :. :. .: . :: : :.: :.::.. : :.:::: .: : :. .:
NP_005 GPGPAAPRLLKREPDWGDGDAPGSLLPAQVAACAQTVVSLAAAGQPTPPTSPEP-PRSSP
110 120 130 140 150 160
240 250 260 270 280 290
pF1KE1 ALGAAGLPGPGSALKGLGAAHPDLRASGGSGAGKAKKSVDKNSNEYRVRRERNNIAVRKS
:.:: : . :.: :.. :..: ::: ::::::::::::
NP_005 RQ----TPAPG----------PAREKSAG------KRGPDRGSPEYRQRRERNNIAVRKS
170 180 190 200
300 310 320 330 340 350
pF1KE1 RDKAKQRNVETQQKVLELTSDNDRLRKRVEQLSRELDTLRGIFRQLPESSLVKAMG--NC
:::::.:: : :::..::...:..:..:::::.:.: :: .:.::: .. : : .:
NP_005 RDKAKRRNQEMQQKLVELSAENEKLHQRVEQLTRDLAGLRQFFKQLPSPPFLPAAGTADC
210 220 230 240 250 260
pF1KE1 A
NP_005 R
358 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 21:58:39 2016 done: Sun Nov 6 21:58:40 2016
Total Scan time: 9.970 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]