Result of FASTA (ccds) for pFN21AB6565
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6565, 374 aa
  1>>>pF1KB6565 374 - 374 aa - 374 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3493+/-0.000866; mu= 16.6048+/- 0.052
 mean_var=75.1343+/-15.174, 0's: 0 Z-trim(107.8): 77  B-trim: 232 in 1/49
 Lambda= 0.147964
 statistics sampled from 9690 (9778) to 9690 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.68), E-opt: 0.2 (0.3), width:  16
 Scan time:  2.750

The best scores are:                                      opt bits E(32554)
CCDS5318.1 ADAP1 gene_id:11033|Hs108|chr7          ( 374) 2606 565.6 2.4e-161
CCDS64577.1 ADAP1 gene_id:11033|Hs108|chr7         ( 385) 2421 526.2 1.9e-149
CCDS64576.1 ADAP1 gene_id:11033|Hs108|chr7         ( 302) 2102 458.0  5e-129
CCDS75558.1 ADAP1 gene_id:11033|Hs108|chr7         ( 279) 1891 412.9 1.7e-115
CCDS11261.1 ADAP2 gene_id:55803|Hs108|chr17        ( 381) 1570 344.5 9.2e-95
CCDS64802.1 AGAP3 gene_id:116988|Hs108|chr7        ( 580)  340 82.1 1.4e-15
CCDS43681.1 AGAP3 gene_id:116988|Hs108|chr7        ( 911)  340 82.2   2e-15
CCDS11101.1 ACAP1 gene_id:9744|Hs108|chr17         ( 740)  334 80.9 4.1e-15
CCDS451.1 SMAP2 gene_id:64744|Hs108|chr1           ( 429)  331 80.1 4.2e-15
CCDS64459.1 SMAP1 gene_id:60682|Hs108|chr6         ( 436)  326 79.0 8.9e-15
CCDS4973.1 SMAP1 gene_id:60682|Hs108|chr6          ( 440)  326 79.0 8.9e-15
CCDS43478.1 SMAP1 gene_id:60682|Hs108|chr6         ( 467)  326 79.0 9.3e-15
CCDS19.2 ACAP3 gene_id:116983|Hs108|chr1           ( 834)  328 79.6 1.1e-14
CCDS8951.1 AGAP2 gene_id:116986|Hs108|chr12        ( 836)  326 79.2 1.5e-14
CCDS44932.1 AGAP2 gene_id:116986|Hs108|chr12       (1192)  326 79.3   2e-14
CCDS33924.1 ACAP2 gene_id:23527|Hs108|chr3         ( 778)  313 76.4 9.6e-14
CCDS7215.1 AGAP4 gene_id:119016|Hs108|chr10        ( 663)  303 74.2 3.7e-13
CCDS2514.1 AGAP1 gene_id:116987|Hs108|chr2         ( 804)  304 74.5 3.7e-13
CCDS33408.1 AGAP1 gene_id:116987|Hs108|chr2        ( 857)  304 74.5 3.9e-13
CCDS44397.1 AGAP6 gene_id:414189|Hs108|chr10       ( 686)  301 73.8 5.1e-13
CCDS73125.1 AGAP9 gene_id:642517|Hs108|chr10       ( 658)  290 71.4 2.5e-12
CCDS75788.1 ASAP1 gene_id:50807|Hs108|chr8         (1122)  291 71.8 3.3e-12
CCDS6362.1 ASAP1 gene_id:50807|Hs108|chr8          (1129)  291 71.8 3.3e-12
CCDS44439.1 AGAP5 gene_id:729092|Hs108|chr10       ( 686)  284 70.2 6.3e-12
CCDS55592.1 SMAP2 gene_id:64744|Hs108|chr1         ( 399)  274 67.9 1.8e-11
CCDS72763.1 SMAP2 gene_id:64744|Hs108|chr1         ( 424)  274 67.9 1.9e-11
CCDS75478.1 SMAP1 gene_id:60682|Hs108|chr6         ( 457)  269 66.8 4.2e-11
CCDS44087.1 ASAP3 gene_id:55616|Hs108|chr1         ( 894)  272 67.7 4.6e-11
CCDS235.1 ASAP3 gene_id:55616|Hs108|chr1           ( 903)  272 67.7 4.6e-11


>>CCDS5318.1 ADAP1 gene_id:11033|Hs108|chr7               (374 aa)
 initn: 2606 init1: 2606 opt: 2606  Z-score: 3010.1  bits: 565.6 E(32554): 2.4e-161
Smith-Waterman score: 2606; 99.7% identity (100.0% similar) in 374 aa overlap (1-374:1-374)

               10        20        30        40        50        60
pF1KB6 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSKVKSV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 RLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIY
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 PEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 PEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 NATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 NATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 SDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIG
       .:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 GDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 SKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 SKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPML
              310       320       330       340       350       360

              370    
pF1KB6 PQEYAVEAHFKHKP
       ::::::::::::::
CCDS53 PQEYAVEAHFKHKP
              370    

>>CCDS64577.1 ADAP1 gene_id:11033|Hs108|chr7              (385 aa)
 initn: 2417 init1: 2417 opt: 2421  Z-score: 2796.5  bits: 526.2 E(32554): 1.9e-149
Smith-Waterman score: 2421; 97.5% identity (98.0% similar) in 358 aa overlap (21-374:28-385)

                      10        20            30        40         
pF1KB6        MAKERRRAVLELLQRPGNARCADCGAP----DPDWASYTLGVFICLSCSGIHR
                                  ::. :      ::::::::::::::::::::::
CCDS64 MFQFVFSRVYCINPARRKWKEFEKMLGCAEEGHASLGRDPDWASYTLGVFICLSCSGIHR
               10        20        30        40        50        60

      50        60        70        80        90       100         
pF1KB6 NIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 NIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWI
               70        80        90       100       110       120

     110       120       130       140       150       160         
pF1KB6 RAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 RAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAK
              130       140       150       160       170       180

     170       180       190       200       210       220         
pF1KB6 EPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAAR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 EPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAAR
              190       200       210       220       230       240

     230       240       250       260       270       280         
pF1KB6 FHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPL
       :::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 FHYLQVAFPGAGDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPL
              250       260       270       280       290       300

     290       300       310       320       330       340         
pF1KB6 DAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 DAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVA
              310       320       330       340       350       360

     350       360       370    
pF1KB6 AFQKAVDRPMLPQEYAVEAHFKHKP
       :::::::::::::::::::::::::
CCDS64 AFQKAVDRPMLPQEYAVEAHFKHKP
              370       380     

>>CCDS64576.1 ADAP1 gene_id:11033|Hs108|chr7              (302 aa)
 initn: 2102 init1: 2102 opt: 2102  Z-score: 2430.0  bits: 458.0 E(32554): 5e-129
Smith-Waterman score: 2102; 99.7% identity (100.0% similar) in 302 aa overlap (73-374:1-302)

             50        60        70        80        90       100  
pF1KB6 SCSGIHRNIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQ
                                     ::::::::::::::::::::::::::::::
CCDS64                               MASHGNDAARARFESKVPSFYYRPTPSDCQ
                                             10        20        30

            110       120       130       140       150       160  
pF1KB6 LLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 LLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKY
               40        50        60        70        80        90

            170       180       190       200       210       220  
pF1KB6 FNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 FNRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWF
              100       110       120       130       140       150

            230       240       250       260       270       280  
pF1KB6 NALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRL
       ::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
CCDS64 NALRAARFHYLQVAFPGAGDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRL
              160       170       180       190       200       210

            290       300       310       320       330       340  
pF1KB6 MYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 MYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETES
              220       230       240       250       260       270

            350       360       370    
pF1KB6 DQREWVAAFQKAVDRPMLPQEYAVEAHFKHKP
       ::::::::::::::::::::::::::::::::
CCDS64 DQREWVAAFQKAVDRPMLPQEYAVEAHFKHKP
              280       290       300  

>>CCDS75558.1 ADAP1 gene_id:11033|Hs108|chr7              (279 aa)
 initn: 1891 init1: 1891 opt: 1891  Z-score: 2187.1  bits: 412.9 E(32554): 1.7e-115
Smith-Waterman score: 1891; 99.3% identity (100.0% similar) in 273 aa overlap (102-374:7-279)

              80        90       100       110       120       130 
pF1KB6 FMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQEFIYPEKQEPYSAGY
                                     .:::::::::::::::::::::::::::::
CCDS75                         MVLASLELLREQWIRAKYERQEFIYPEKQEPYSAGY
                                       10        20        30      

             140       150       160       170       180       190 
pF1KB6 REGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 REGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHLNATFQPAKIGH
         40        50        60        70        80        90      

             200       210       220       230       240       250 
pF1KB6 PHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGASDADLVPKLSR
       :::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
CCDS75 PHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVAFPGAGDADLVPKLSR
        100       110       120       130       140       150      

             260       270       280       290       300       310 
pF1KB6 NYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 NYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHG
        160       170       180       190       200       210      

             320       330       340       350       360       370 
pF1KB6 FPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPMLPQEYAVEAHFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 FPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDRPMLPQEYAVEAHFK
        220       230       240       250       260       270      

          
pF1KB6 HKP
       :::
CCDS75 HKP
          

>>CCDS11261.1 ADAP2 gene_id:55803|Hs108|chr17             (381 aa)
 initn: 1544 init1: 740 opt: 1570  Z-score: 1814.8  bits: 344.5 E(32554): 9.2e-95
Smith-Waterman score: 1570; 58.8% identity (84.1% similar) in 364 aa overlap (3-361:4-366)

                 10          20        30        40        50      
pF1KB6  MAKER-RRAVLELLQRP--GNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIPQVSK
          .:: .. .::::. :  :::.:::::: ::::::: ::.::::.: :.:::.:..:.
CCDS11 MGDRERNKKRLLELLRAPDTGNAHCADCGAADPDWASYKLGIFICLNCCGVHRNFPDISR
               10        20        30        40        50        60

         60        70        80        90       100       110      
pF1KB6 VKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAKYERQ
       ::::::: :... ::::  .::  ..:.::..::.::: :  .:: .:.::::::::::.
CCDS11 VKSVRLDFWDDSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERR
               70        80        90       100       110       120

        120       130       140       150       160       170      
pF1KB6 EFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMK
       ::.  . .     : ::::::::::::.::: :::::  ::: ::::.....: ::::..
CCDS11 EFM-ADGETISLPGNREGFLWKRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVIS
               130       140       150       160       170         

        180       190       200       210       220       230      
pF1KB6 IEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFHYLQVA
       :. ::::::  :::::::::.:: .:. :::.:.:::.:::::::::::::::..::..:
CCDS11 IKDLNATFQTEKIGHPHGLQITYRRDGHTRNLFVYHESGKEIVDWFNALRAARLQYLKMA
     180       190       200       210       220       230         

        240       250       260       270         280       290    
pF1KB6 FPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMD--DRRLMYFKDPLDAFAR
       ::   ...::: :.:::::.:.:::::::: : :.::::..:  .:::.:.:.::::: .
CCDS11 FPELPESELVPFLTRNYLKQGFMEKTGPKQKEPFKKRWFALDCHERRLLYYKNPLDAFEQ
     240       250       260       270       280       290         

          300       310       320       330       340       350    
pF1KB6 GEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKA
       :.::.:.::.:: . . .: . .:..:  :.:::::.:.:...: .:..:.::. ... .
CCDS11 GQVFLGNKEQGYEAYEDLPKGIRGNRWKAGLTIVTPERRFVLTCPSEKEQQEWLESLRGV
     300       310       320       330       340       350         

          360       370      
pF1KB6 VDRPMLPQEYAVEAHFKHKP  
       .. :. :               
CCDS11 LSSPLTPLNRLTASTESGRSSR
     360       370       380 

>>CCDS64802.1 AGAP3 gene_id:116988|Hs108|chr7             (580 aa)
 initn: 236 init1: 236 opt: 340  Z-score: 393.2  bits: 82.1 E(32554): 1.4e-15
Smith-Waterman score: 340; 43.4% identity (71.7% similar) in 106 aa overlap (17-121:342-446)

                             10        20        30        40      
pF1KB6               MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSG
                                     ::. : :: ::.::::: .::...:. :::
CCDS64 SLQGCRSAKDKTRLGNQNAALAVQAVRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSG
             320       330       340       350       360       370 

         50         60        70        80        90       100     
pF1KB6 IHRNI-PQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLR
       :::..  ..:.:.:. :: :    .  :.. ::  : . .:. . . : .: :. :.  .
CCDS64 IHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALGG-YSKPGPDACREEK
             380       390       400       410        420       430

         110       120       130       140       150       160     
pF1KB6 EQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNR
       :.:::::::.. :. :                                            
CCDS64 ERWIRAKYEQKLFLAPLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYGDGD
              440       450       460       470       480       490

>>CCDS43681.1 AGAP3 gene_id:116988|Hs108|chr7             (911 aa)
 initn: 236 init1: 236 opt: 340  Z-score: 390.4  bits: 82.2 E(32554): 2e-15
Smith-Waterman score: 340; 43.4% identity (71.7% similar) in 106 aa overlap (17-121:673-777)

                             10        20        30        40      
pF1KB6               MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSG
                                     ::. : :: ::.::::: .::...:. :::
CCDS43 SLQGCRSAKDKTRLGNQNAALAVQAVRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSG
            650       660       670       680       690       700  

         50         60        70        80        90       100     
pF1KB6 IHRNI-PQVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLR
       :::..  ..:.:.:. :: :    .  :.. ::  : . .:. . . : .: :. :.  .
CCDS43 IHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALGG-YSKPGPDACREEK
            710       720       730       740        750       760 

         110       120       130       140       150       160     
pF1KB6 EQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNR
       :.:::::::.. :. :                                            
CCDS43 ERWIRAKYEQKLFLAPLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETYGDGD
             770       780       790       800       810       820 

>>CCDS11101.1 ACAP1 gene_id:9744|Hs108|chr17              (740 aa)
 initn: 292 init1: 178 opt: 334  Z-score: 384.8  bits: 80.9 E(32554): 4.1e-15
Smith-Waterman score: 347; 36.8% identity (58.2% similar) in 182 aa overlap (17-195:416-585)

                             10        20        30        40      
pF1KB6               MAKERRRAVLELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSG
                                     :::.: ::  : :.::: .::: .:..:::
CCDS11 SAATLGSGGMARGREPGGVGHVVAQVQSVDGNAQCCDCREPAPEWASINLGVTLCIQCSG
         390       400       410       420       430       440     

         50         60        70        80        90        100    
pF1KB6 IHRNIP-QVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYR-PTPSDCQLL
       :::..  . :::.:. ::.::   :..:   ::      .:..: ..  . : ::  .  
CCDS11 IHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVIINQIYEARVEAMAVKKPGPSCSRQE
         450       460       470       480       490       500     

          110       120       130       140        150       160   
pF1KB6 REQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQF-LSRKFVLTEREGALKYF
       .: ::.::: ...:.    . :   : : :    :::  ::  .  :  .  : :.:   
CCDS11 KEAWIHAKYVEKKFL---TKLPEIRGRRGG----RGRPRGQPPVPPKPSIRPRPGSL---
         510       520          530           540       550        

           170       180       190       200       210       220   
pF1KB6 NRNDAKEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFN
        :.  . :.  .   : .: .  :. ::: .:                            
CCDS11 -RSKPEPPSEDLGSLHPGALLFRAS-GHPPSLPTMADALAHGADVNWVNGGQDNATPLIQ
          560       570        580       590       600       610   

           230       240       250       260       270       280   
pF1KB6 ALRAARFHYLQVAFPGASDADLVPKLSRNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLM
                                                                   
CCDS11 ATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEG
           620       630       640       650       660       670   

>>CCDS451.1 SMAP2 gene_id:64744|Hs108|chr1                (429 aa)
 initn: 336 init1: 175 opt: 331  Z-score: 384.7  bits: 80.1 E(32554): 4.2e-15
Smith-Waterman score: 331; 38.7% identity (62.7% similar) in 142 aa overlap (4-142:10-146)

                     10         20        30        40        50   
pF1KB6       MAKERRRAVL-ELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIHRNIP-
                .: .::: .:: .  :  :::: .  : :::...:::::. :.:::::.  
CCDS45 MTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGV
               10        20        30        40        50        60

             60        70        80        90       100       110  
pF1KB6 QVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQWIRAK
       ..:.:::: :: : . :.. :   ::  :   .:. .:  . ::  .      : .:: :
CCDS45 HISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAV---EGFIRDK
               70        80        90       100       110          

            120       130        140       150       160       170 
pF1KB6 YERQEFIYPEKQEPYSAGYRE-GFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDAKEP
       ::.....  ...   .:  .:    :::: .                             
CCDS45 YEKKKYM--DRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRK
       120         130       140       150       160       170     

             180       190       200       210       220       230 
pF1KB6 KAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARFH
                                                                   
CCDS45 SSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTA
         180       190       200       210       220       230     

>>CCDS64459.1 SMAP1 gene_id:60682|Hs108|chr6              (436 aa)
 initn: 329 init1: 184 opt: 326  Z-score: 378.8  bits: 79.0 E(32554): 8.9e-15
Smith-Waterman score: 326; 42.7% identity (69.2% similar) in 117 aa overlap (4-118:15-128)

                          10         20        30        40        
pF1KB6            MAKERRRAVL-ELLQRPGNARCADCGAPDPDWASYTLGVFICLSCSGIH
                     :... .: .::..  :  :::: :  : :::...:::::. :.:::
CCDS64 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIH
               10        20        30        40        50        60

       50         60        70        80        90       100       
pF1KB6 RNIP-QVSKVKSVRLDAWEEAQVEFMASHGNDAARARFESKVPSFYYRPTPSDCQLLREQ
       ::.  ..:.:::: :: :   :.. : . ::  ::  .:...:  . ::  .:  .  : 
CCDS64 RNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQ-TDQAV--EF
               70        80        90       100       110          

       110       120       130       140       150       160       
pF1KB6 WIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRND
       .:: :::....                                                 
CCDS64 FIRDKYEKKKYYDKNAIAITNKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKK
       120       130       140       150       160       170       




374 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 20:42:24 2016 done: Sat Nov  5 20:42:25 2016
 Total Scan time:  2.750 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com