Result of FASTA (omim) for
pFN21AB4172
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB4172, 359 aa
1>>>pF1KB4172 359 - 359 aa - 359 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9340+/-0.000494; mu= 21.6549+/- 0.032
mean_var=203.3763+/-46.790, 0's: 0 Z-trim(113.7): 415 B-trim: 1232 in 1/57
Lambda= 0.089934
statistics sampled from 22692 (23236) to 22692 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.643), E-opt: 0.2 (0.272), width: 16
Scan time: 7.990
The best scores are: opt bits E(85289)
NP_004423 (OMIM: 601673) ELAV-like protein 2 isofo ( 359) 2363 319.7 6.3e-87
XP_016869912 (OMIM: 601673) PREDICTED: ELAV-like p ( 359) 2363 319.7 6.3e-87
XP_016869911 (OMIM: 601673) PREDICTED: ELAV-like p ( 359) 2363 319.7 6.3e-87
XP_016869910 (OMIM: 601673) PREDICTED: ELAV-like p ( 359) 2363 319.7 6.3e-87
XP_016869909 (OMIM: 601673) PREDICTED: ELAV-like p ( 359) 2363 319.7 6.3e-87
XP_016869908 (OMIM: 601673) PREDICTED: ELAV-like p ( 359) 2363 319.7 6.3e-87
XP_016869906 (OMIM: 601673) PREDICTED: ELAV-like p ( 373) 2363 319.7 6.4e-87
XP_016869904 (OMIM: 601673) PREDICTED: ELAV-like p ( 376) 2363 319.7 6.5e-87
XP_016869903 (OMIM: 601673) PREDICTED: ELAV-like p ( 387) 2363 319.8 6.5e-87
XP_016869902 (OMIM: 601673) PREDICTED: ELAV-like p ( 387) 2363 319.8 6.5e-87
XP_016869897 (OMIM: 601673) PREDICTED: ELAV-like p ( 388) 2363 319.8 6.6e-87
XP_011516076 (OMIM: 601673) PREDICTED: ELAV-like p ( 388) 2363 319.8 6.6e-87
XP_016869898 (OMIM: 601673) PREDICTED: ELAV-like p ( 388) 2363 319.8 6.6e-87
XP_016869899 (OMIM: 601673) PREDICTED: ELAV-like p ( 388) 2363 319.8 6.6e-87
XP_005251452 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 2351 318.1 1.9e-86
XP_011516086 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 2351 318.1 1.9e-86
XP_005251451 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 2351 318.1 1.9e-86
XP_005251450 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 2351 318.1 1.9e-86
XP_006716799 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 2351 318.1 1.9e-86
XP_011516087 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 2351 318.1 1.9e-86
XP_011516088 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 2351 318.1 1.9e-86
XP_016869907 (OMIM: 601673) PREDICTED: ELAV-like p ( 360) 2351 318.1 1.9e-86
XP_011516085 (OMIM: 601673) PREDICTED: ELAV-like p ( 374) 2351 318.2 1.9e-86
XP_016869900 (OMIM: 601673) PREDICTED: ELAV-like p ( 388) 2351 318.2 1.9e-86
XP_016869901 (OMIM: 601673) PREDICTED: ELAV-like p ( 388) 2351 318.2 1.9e-86
XP_011516082 (OMIM: 601673) PREDICTED: ELAV-like p ( 389) 2351 318.2 1.9e-86
XP_006716798 (OMIM: 601673) PREDICTED: ELAV-like p ( 389) 2351 318.2 1.9e-86
XP_006716797 (OMIM: 601673) PREDICTED: ELAV-like p ( 389) 2351 318.2 1.9e-86
XP_011516081 (OMIM: 601673) PREDICTED: ELAV-like p ( 389) 2351 318.2 1.9e-86
XP_011516080 (OMIM: 601673) PREDICTED: ELAV-like p ( 392) 2351 318.2 1.9e-86
XP_016856028 (OMIM: 168360) PREDICTED: ELAV-like p ( 359) 2157 293.0 7e-79
NP_001311141 (OMIM: 168360) ELAV-like protein 4 is ( 365) 2157 293.0 7.1e-79
NP_001311143 (OMIM: 168360) ELAV-like protein 4 is ( 365) 2157 293.0 7.1e-79
NP_001138246 (OMIM: 168360) ELAV-like protein 4 is ( 366) 2157 293.0 7.1e-79
NP_001138248 (OMIM: 168360) ELAV-like protein 4 is ( 366) 2157 293.0 7.1e-79
NP_001138249 (OMIM: 168360) ELAV-like protein 4 is ( 369) 2157 293.0 7.1e-79
NP_001281277 (OMIM: 168360) ELAV-like protein 4 is ( 371) 2157 293.0 7.1e-79
XP_016856027 (OMIM: 168360) PREDICTED: ELAV-like p ( 379) 2157 293.0 7.2e-79
NP_001138247 (OMIM: 168360) ELAV-like protein 4 is ( 402) 2157 293.1 7.4e-79
NP_115657 (OMIM: 603458) ELAV-like protein 3 isofo ( 360) 1924 262.7 8.9e-70
XP_011526080 (OMIM: 603458) PREDICTED: ELAV-like p ( 366) 1900 259.6 7.7e-69
NP_001411 (OMIM: 603458) ELAV-like protein 3 isofo ( 367) 1900 259.6 7.8e-69
NP_001164666 (OMIM: 601673) ELAV-like protein 2 is ( 346) 1545 213.5 5.5e-55
XP_016869913 (OMIM: 601673) PREDICTED: ELAV-like p ( 346) 1545 213.5 5.5e-55
NP_001164668 (OMIM: 601673) ELAV-like protein 2 is ( 346) 1545 213.5 5.5e-55
XP_016869914 (OMIM: 601673) PREDICTED: ELAV-like p ( 346) 1545 213.5 5.5e-55
XP_016869905 (OMIM: 601673) PREDICTED: ELAV-like p ( 375) 1545 213.6 5.7e-55
XP_011516079 (OMIM: 601673) PREDICTED: ELAV-like p ( 375) 1545 213.6 5.7e-55
XP_011516078 (OMIM: 601673) PREDICTED: ELAV-like p ( 376) 1534 212.2 1.5e-54
XP_016869915 (OMIM: 601673) PREDICTED: ELAV-like p ( 225) 1480 204.8 1.6e-52
>>NP_004423 (OMIM: 601673) ELAV-like protein 2 isoform a (359 aa)
initn: 2363 init1: 2363 opt: 2363 Z-score: 1681.6 bits: 319.7 E(85289): 6.3e-87
Smith-Waterman score: 2363; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:1-359)
10 20 30 40 50 60
pF1KB4 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 SIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 EAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 EAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 NLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 NLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA
310 320 330 340 350
>>XP_016869912 (OMIM: 601673) PREDICTED: ELAV-like prote (359 aa)
initn: 2363 init1: 2363 opt: 2363 Z-score: 1681.6 bits: 319.7 E(85289): 6.3e-87
Smith-Waterman score: 2363; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:1-359)
10 20 30 40 50 60
pF1KB4 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 EAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 NLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA
310 320 330 340 350
>>XP_016869911 (OMIM: 601673) PREDICTED: ELAV-like prote (359 aa)
initn: 2363 init1: 2363 opt: 2363 Z-score: 1681.6 bits: 319.7 E(85289): 6.3e-87
Smith-Waterman score: 2363; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:1-359)
10 20 30 40 50 60
pF1KB4 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 EAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 NLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA
310 320 330 340 350
>>XP_016869910 (OMIM: 601673) PREDICTED: ELAV-like prote (359 aa)
initn: 2363 init1: 2363 opt: 2363 Z-score: 1681.6 bits: 319.7 E(85289): 6.3e-87
Smith-Waterman score: 2363; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:1-359)
10 20 30 40 50 60
pF1KB4 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 EAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 NLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA
310 320 330 340 350
>>XP_016869909 (OMIM: 601673) PREDICTED: ELAV-like prote (359 aa)
initn: 2363 init1: 2363 opt: 2363 Z-score: 1681.6 bits: 319.7 E(85289): 6.3e-87
Smith-Waterman score: 2363; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:1-359)
10 20 30 40 50 60
pF1KB4 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 EAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 NLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA
310 320 330 340 350
>>XP_016869908 (OMIM: 601673) PREDICTED: ELAV-like prote (359 aa)
initn: 2363 init1: 2363 opt: 2363 Z-score: 1681.6 bits: 319.7 E(85289): 6.3e-87
Smith-Waterman score: 2363; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:1-359)
10 20 30 40 50 60
pF1KB4 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB4 SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB4 SIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB4 EAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB4 NLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG
250 260 270 280 290 300
310 320 330 340 350
pF1KB4 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKTHKA
310 320 330 340 350
>>XP_016869906 (OMIM: 601673) PREDICTED: ELAV-like prote (373 aa)
initn: 2363 init1: 2363 opt: 2363 Z-score: 1681.4 bits: 319.7 E(85289): 6.4e-87
Smith-Waterman score: 2363; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:15-373)
10 20 30 40
pF1KB4 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYL
::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MTKQYEVAVQVIAAMETQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB4 PQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQ
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB4 TKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISR
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB4 GVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRY
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB4 PGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPD
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB4 ADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRV
310 320 330 340 350 360
350
pF1KB4 LQVSFKTNKTHKA
:::::::::::::
XP_016 LQVSFKTNKTHKA
370
>>XP_016869904 (OMIM: 601673) PREDICTED: ELAV-like prote (376 aa)
initn: 2363 init1: 2363 opt: 2363 Z-score: 1681.4 bits: 319.7 E(85289): 6.5e-87
Smith-Waterman score: 2363; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:18-376)
10 20 30 40
pF1KB4 METQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIV
:::::::::::::::::::::::::::::::::::::::::::
XP_016 MPLFNNEPRCFQQVIAAMETQLSNGPTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIV
10 20 30 40 50 60
50 60 70 80 90 100
pF1KB4 NYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGL
70 80 90 100 110 120
110 120 130 140 150 160
pF1KB4 RLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG
130 140 150 160 170 180
170 180 190 200 210 220
pF1KB4 ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPN
190 200 210 220 230 240
230 240 250 260 270 280
pF1KB4 RRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNL
250 260 270 280 290 300
290 300 310 320 330 340
pF1KB4 APDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 APDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLG
310 320 330 340 350 360
350
pF1KB4 DRVLQVSFKTNKTHKA
::::::::::::::::
XP_016 DRVLQVSFKTNKTHKA
370
>>XP_016869903 (OMIM: 601673) PREDICTED: ELAV-like prote (387 aa)
initn: 2363 init1: 2363 opt: 2363 Z-score: 1681.3 bits: 319.8 E(85289): 6.5e-87
Smith-Waterman score: 2363; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:29-387)
10 20 30
pF1KB4 METQLSNGPTCNNTANGPTTINNNCSSPVDSG
::::::::::::::::::::::::::::::::
XP_016 MAVRLCDVASLLRSGSWAAEPWTGVIAAMETQLSNGPTCNNTANGPTTINNNCSSPVDSG
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB4 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB4 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB4 TSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQ
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB4 AILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHP
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB4 GTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAM
310 320 330 340 350 360
340 350
pF1KB4 AIASLNGYRLGDRVLQVSFKTNKTHKA
:::::::::::::::::::::::::::
XP_016 AIASLNGYRLGDRVLQVSFKTNKTHKA
370 380
>>XP_016869902 (OMIM: 601673) PREDICTED: ELAV-like prote (387 aa)
initn: 2363 init1: 2363 opt: 2363 Z-score: 1681.3 bits: 319.8 E(85289): 6.5e-87
Smith-Waterman score: 2363; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:29-387)
10 20 30
pF1KB4 METQLSNGPTCNNTANGPTTINNNCSSPVDSG
::::::::::::::::::::::::::::::::
XP_016 MAVRLCDVASLLRSGSWAAEPWTGVIAAMETQLSNGPTCNNTANGPTTINNNCSSPVDSG
10 20 30 40 50 60
40 50 60 70 80 90
pF1KB4 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD
70 80 90 100 110 120
100 110 120 130 140 150
pF1KB4 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRII
130 140 150 160 170 180
160 170 180 190 200 210
pF1KB4 TSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPITVKFANNPSQKTNQ
190 200 210 220 230 240
220 230 240 250 260 270
pF1KB4 AILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDGMTSLAGINIPGHP
250 260 270 280 290 300
280 290 300 310 320 330
pF1KB4 GTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAM
310 320 330 340 350 360
340 350
pF1KB4 AIASLNGYRLGDRVLQVSFKTNKTHKA
:::::::::::::::::::::::::::
XP_016 AIASLNGYRLGDRVLQVSFKTNKTHKA
370 380
359 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 20:46:50 2016 done: Fri Nov 4 20:46:52 2016
Total Scan time: 7.990 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]