FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3612, 115 aa 1>>>pF1KE3612 115 - 115 aa - 115 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0976+/-0.000504; mu= 12.9634+/- 0.031 mean_var=69.7909+/-13.717, 0's: 0 Z-trim(115.7): 6 B-trim: 0 in 0/51 Lambda= 0.153523 statistics sampled from 16318 (16319) to 16318 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.84), E-opt: 0.2 (0.501), width: 16 Scan time: 1.630 The best scores are: opt bits E(32554) CCDS2696.1 CCK gene_id:885|Hs108|chr3 ( 115) 775 178.9 5.8e-46 >>CCDS2696.1 CCK gene_id:885|Hs108|chr3 (115 aa) initn: 775 init1: 775 opt: 775 Z-score: 938.6 bits: 178.9 E(32554): 5.8e-46 Smith-Waterman score: 775; 100.0% identity (100.0% similar) in 115 aa overlap (1-115:1-115) 10 20 30 40 50 60 pF1KE3 MNSGVCLCVLMAVLAAGALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 MNSGVCLCVLMAVLAAGALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGA 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 LLARYIQQARKAPSGRMSIVKNLQNLDPSHRISDRDYMGWMDFGRRSAEEYEYPS ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 LLARYIQQARKAPSGRMSIVKNLQNLDPSHRISDRDYMGWMDFGRRSAEEYEYPS 70 80 90 100 110 115 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 22:50:14 2016 done: Sat Nov 5 22:50:14 2016 Total Scan time: 1.630 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]