FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1521, 329 aa 1>>>pF1KE1521 329 - 329 aa - 329 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7597+/-0.000803; mu= 14.2617+/- 0.049 mean_var=86.1163+/-17.377, 0's: 0 Z-trim(109.1): 58 B-trim: 87 in 1/51 Lambda= 0.138208 statistics sampled from 10632 (10690) to 10632 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.328), width: 16 Scan time: 2.090 The best scores are: opt bits E(32554) CCDS3009.1 CD86 gene_id:942|Hs108|chr3 ( 329) 2202 448.7 2.9e-126 CCDS43138.1 CD86 gene_id:942|Hs108|chr3 ( 323) 2152 438.7 2.9e-123 CCDS56273.1 CD86 gene_id:942|Hs108|chr3 ( 247) 1657 340.0 1.2e-93 CCDS74991.1 CD86 gene_id:942|Hs108|chr3 ( 275) 1485 305.7 2.8e-83 CCDS56272.1 CD86 gene_id:942|Hs108|chr3 ( 217) 1308 270.3 9.6e-73 CCDS2989.1 CD80 gene_id:941|Hs108|chr3 ( 288) 277 64.9 9.2e-11 >>CCDS3009.1 CD86 gene_id:942|Hs108|chr3 (329 aa) initn: 2202 init1: 2202 opt: 2202 Z-score: 2380.2 bits: 448.7 E(32554): 2.9e-126 Smith-Waterman score: 2202; 99.4% identity (100.0% similar) in 329 aa overlap (1-329:1-329) 10 20 30 40 50 60 pF1KE1 MDPQCTMGLSNILFVMAFLLSGAAPLKIQAYFNETADLPCQFANSQNQSLSELVVFWQDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 MDPQCTMGLSNILFVMAFLLSGAAPLKIQAYFNETADLPCQFANSQNQSLSELVVFWQDQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 ENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IRIHQMNSELSVLANFSQPEIVPISNITENVYINLTCSSIHGYPEPKKMSVLLRTKNSTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 IRIHQMNSELSVLANFSQPEIVPISNITENVYINLTCSSIHGYPEPKKMSVLLRTKNSTI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 EYDGIMQKSQDNVTELYDVSISLSVSFPDVTSNMTIFCILETDKTRLLSSPFSIELEDPQ ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 EYDGVMQKSQDNVTELYDVSISLSVSFPDVTSNMTIFCILETDKTRLLSSPFSIELEDPQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 PPPDHIPWITAVLPTVIICVMVFCLILWKWKKKKRPRNSYKCGTNTMEREESEQTKKREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 PPPDHIPWITAVLPTVIICVMVFCLILWKWKKKKRPRNSYKCGTNTMEREESEQTKKREK 250 260 270 280 290 300 310 320 pF1KE1 IHIPERSDETQRVFKSSKTSSCDKSDTCF :::::::::.::::::::::::::::::: CCDS30 IHIPERSDEAQRVFKSSKTSSCDKSDTCF 310 320 >>CCDS43138.1 CD86 gene_id:942|Hs108|chr3 (323 aa) initn: 2152 init1: 2152 opt: 2152 Z-score: 2326.4 bits: 438.7 E(32554): 2.9e-123 Smith-Waterman score: 2152; 99.4% identity (100.0% similar) in 323 aa overlap (7-329:1-323) 10 20 30 40 50 60 pF1KE1 MDPQCTMGLSNILFVMAFLLSGAAPLKIQAYFNETADLPCQFANSQNQSLSELVVFWQDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MGLSNILFVMAFLLSGAAPLKIQAYFNETADLPCQFANSQNQSLSELVVFWQDQ 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 ENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGM 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 IRIHQMNSELSVLANFSQPEIVPISNITENVYINLTCSSIHGYPEPKKMSVLLRTKNSTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 IRIHQMNSELSVLANFSQPEIVPISNITENVYINLTCSSIHGYPEPKKMSVLLRTKNSTI 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 EYDGIMQKSQDNVTELYDVSISLSVSFPDVTSNMTIFCILETDKTRLLSSPFSIELEDPQ ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EYDGVMQKSQDNVTELYDVSISLSVSFPDVTSNMTIFCILETDKTRLLSSPFSIELEDPQ 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE1 PPPDHIPWITAVLPTVIICVMVFCLILWKWKKKKRPRNSYKCGTNTMEREESEQTKKREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PPPDHIPWITAVLPTVIICVMVFCLILWKWKKKKRPRNSYKCGTNTMEREESEQTKKREK 240 250 260 270 280 290 310 320 pF1KE1 IHIPERSDETQRVFKSSKTSSCDKSDTCF :::::::::.::::::::::::::::::: CCDS43 IHIPERSDEAQRVFKSSKTSSCDKSDTCF 300 310 320 >>CCDS56273.1 CD86 gene_id:942|Hs108|chr3 (247 aa) initn: 1657 init1: 1657 opt: 1657 Z-score: 1794.7 bits: 340.0 E(32554): 1.2e-93 Smith-Waterman score: 1657; 99.2% identity (100.0% similar) in 247 aa overlap (83-329:1-247) 60 70 80 90 100 110 pF1KE1 LVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCII :::::::::::::::::::::::::::::: CCDS56 MGRTSFDSDSWTLRLHNLQIKDKGLYQCII 10 20 30 120 130 140 150 160 170 pF1KE1 HHKKPTGMIRIHQMNSELSVLANFSQPEIVPISNITENVYINLTCSSIHGYPEPKKMSVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 HHKKPTGMIRIHQMNSELSVLANFSQPEIVPISNITENVYINLTCSSIHGYPEPKKMSVL 40 50 60 70 80 90 180 190 200 210 220 230 pF1KE1 LRTKNSTIEYDGIMQKSQDNVTELYDVSISLSVSFPDVTSNMTIFCILETDKTRLLSSPF ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 LRTKNSTIEYDGVMQKSQDNVTELYDVSISLSVSFPDVTSNMTIFCILETDKTRLLSSPF 100 110 120 130 140 150 240 250 260 270 280 290 pF1KE1 SIELEDPQPPPDHIPWITAVLPTVIICVMVFCLILWKWKKKKRPRNSYKCGTNTMEREES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 SIELEDPQPPPDHIPWITAVLPTVIICVMVFCLILWKWKKKKRPRNSYKCGTNTMEREES 160 170 180 190 200 210 300 310 320 pF1KE1 EQTKKREKIHIPERSDETQRVFKSSKTSSCDKSDTCF :::::::::::::::::.::::::::::::::::::: CCDS56 EQTKKREKIHIPERSDEAQRVFKSSKTSSCDKSDTCF 220 230 240 >>CCDS74991.1 CD86 gene_id:942|Hs108|chr3 (275 aa) initn: 1485 init1: 1485 opt: 1485 Z-score: 1608.7 bits: 305.7 E(32554): 2.8e-83 Smith-Waterman score: 1682; 84.5% identity (85.1% similar) in 323 aa overlap (7-329:1-275) 10 20 30 40 50 60 pF1KE1 MDPQCTMGLSNILFVMAFLLSGAAPLKIQAYFNETADLPCQFANSQNQSLSELVVFWQDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 MGLSNILFVMAFLLSGAAPLKIQAYFNETADLPCQFANSQNQSLSELVVFWQDQ 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 ENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 ENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGM 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 IRIHQMNSELSVLANFSQPEIVPISNITENVYINLTCSSIHGYPEPKKMSVLLRTKNSTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 IRIHQMNSELSVLANFSQPEIVPISNITENVYINLTCSSIHGYPEPKKMSVLLRTKNSTI 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE1 EYDGIMQKSQDNVTELYDVSISLSVSFPDVTSNMTIFCILETDKTRLLSSPFSIELEDPQ ::::.::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 EYDGVMQKSQDNVTELYDVSISLSVSFPDVTSNMTIFCILETDKTRLLSSPFSI------ 180 190 200 210 220 250 260 270 280 290 300 pF1KE1 PPPDHIPWITAVLPTVIICVMVFCLILWKWKKKKRPRNSYKCGTNTMEREESEQTKKREK :::::::::::::::::: CCDS74 ------------------------------------------GTNTMEREESEQTKKREK 230 240 310 320 pF1KE1 IHIPERSDETQRVFKSSKTSSCDKSDTCF :::::::::.::::::::::::::::::: CCDS74 IHIPERSDEAQRVFKSSKTSSCDKSDTCF 250 260 270 >>CCDS56272.1 CD86 gene_id:942|Hs108|chr3 (217 aa) initn: 1434 init1: 1308 opt: 1308 Z-score: 1419.4 bits: 270.3 E(32554): 9.6e-73 Smith-Waterman score: 1308; 99.0% identity (100.0% similar) in 196 aa overlap (134-329:22-217) 110 120 130 140 150 160 pF1KE1 DKGLYQCIIHHKKPTGMIRIHQMNSELSVLANFSQPEIVPISNITENVYINLTCSSIHGY :::::::::::::::::::::::::::::: CCDS56 MDPQCTMGLSNILFVMAFLLSANFSQPEIVPISNITENVYINLTCSSIHGY 10 20 30 40 50 170 180 190 200 210 220 pF1KE1 PEPKKMSVLLRTKNSTIEYDGIMQKSQDNVTELYDVSISLSVSFPDVTSNMTIFCILETD :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: CCDS56 PEPKKMSVLLRTKNSTIEYDGVMQKSQDNVTELYDVSISLSVSFPDVTSNMTIFCILETD 60 70 80 90 100 110 230 240 250 260 270 280 pF1KE1 KTRLLSSPFSIELEDPQPPPDHIPWITAVLPTVIICVMVFCLILWKWKKKKRPRNSYKCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 KTRLLSSPFSIELEDPQPPPDHIPWITAVLPTVIICVMVFCLILWKWKKKKRPRNSYKCG 120 130 140 150 160 170 290 300 310 320 pF1KE1 TNTMEREESEQTKKREKIHIPERSDETQRVFKSSKTSSCDKSDTCF ::::::::::::::::::::::::::.::::::::::::::::::: CCDS56 TNTMEREESEQTKKREKIHIPERSDEAQRVFKSSKTSSCDKSDTCF 180 190 200 210 >>CCDS2989.1 CD80 gene_id:941|Hs108|chr3 (288 aa) initn: 144 init1: 54 opt: 277 Z-score: 306.7 bits: 64.9 E(32554): 9.2e-11 Smith-Waterman score: 277; 25.9% identity (58.0% similar) in 274 aa overlap (12-278:24-277) 10 20 30 40 pF1KE1 MDPQCTMGLSNILFVMAFLLSGAAPLKIQAYFNETADLPCQFANSQNQ .: .. . ::. ... .:.: : : : . . CCDS29 MGHTRRQGTSPSKCPYLNFFQLLVLAGLSHFCSGV--IHVTKEVKEVATLSCGH-NVSVE 10 20 30 40 50 50 60 70 80 90 100 pF1KE1 SLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFD-SDSWTLRLHNLQIKDKGL :.. ..:: ....::. .. : .. .: .:: :: ... .. . :. .:.: CCDS29 ELAQTRIYWQKEKKMVLT-MMSGDM---NIWPEYKNRTIFDITNNLSIVILALRPSDEGT 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 YQCIIHHKKPTGMIRIHQMNSELSVLANFSQPEIVPISNITENVYINLTCSSIHGYPEPK :.:.. . . .. : : . ::: :.: : : . : :. . ::. :.:::. CCDS29 YECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIR-RIICSTSGGFPEPH 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 KMSVLLRTKNSTIEYDGIMQK-SQDNVTELYDVSISLSVSFPDVTSNMTIFCILETDKTR .: : .:. : ..: ::: :::: :: .:. ..:.: ...:... . : CCDS29 -LSWL---ENGE-ELNAINTTVSQDPETELYAVSSKLDF---NMTTNHSFMCLIKYGHLR 180 190 200 210 220 230 240 250 260 270 280 pF1KE1 LLSSPFSIELEDPQPPPDHI-P-WITAVLPT---VIICVMVFCLILWKWKKKKRPRNSYK . .. :. . . ::.. : : ... . .:: ...:. . ..: :: CCDS29 V-NQTFNWNTTKQEHFPDNLLPSWAITLISVNGIFVICCLTYCFA---PRCRERRRNERL 230 240 250 260 270 280 290 300 310 320 pF1KE1 CGTNTMEREESEQTKKREKIHIPERSDETQRVFKSSKTSSCDKSDTCF CCDS29 RRESVRPV 329 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:14:24 2016 done: Sun Nov 6 22:14:25 2016 Total Scan time: 2.090 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]