FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1403, 374 aa 1>>>pF1KE1403 374 - 374 aa - 374 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8699+/-0.000533; mu= 19.4114+/- 0.033 mean_var=106.3067+/-26.943, 0's: 0 Z-trim(107.0): 691 B-trim: 938 in 1/47 Lambda= 0.124392 statistics sampled from 14272 (15046) to 14272 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.502), E-opt: 0.2 (0.176), width: 16 Scan time: 7.090 The best scores are: opt bits E(85289) NP_113597 (OMIM: 601835) C-C chemokine receptor ty ( 374) 2453 452.0 1e-126 NP_004358 (OMIM: 601835) C-C chemokine receptor ty ( 374) 2453 452.0 1e-126 NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372) 955 183.1 8.7e-46 NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372) 955 183.1 8.7e-46 NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372) 955 183.1 8.7e-46 NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378) 955 183.2 8.8e-46 NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315) 881 169.8 7.8e-42 NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360) 880 169.7 9.6e-42 XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360) 880 169.7 9.6e-42 NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350) 877 169.1 1.4e-41 NP_001548 (OMIM: 146928) C-X-C chemokine receptor ( 360) 853 164.8 2.8e-40 XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 853 164.8 2.8e-40 XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 853 164.8 2.8e-40 XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 853 164.8 2.8e-40 XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 853 164.8 2.8e-40 NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360) 853 164.8 2.8e-40 NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369) 837 162.0 2.1e-39 XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369) 837 162.0 2.1e-39 NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357) 832 161.1 3.8e-39 NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357) 832 161.1 3.8e-39 NP_001495 (OMIM: 300574) C-X-C chemokine receptor ( 368) 750 146.4 1e-34 XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378) 750 146.4 1e-34 XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415) 750 146.4 1.1e-34 NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415) 750 146.4 1.1e-34 NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 749 146.2 1.1e-34 XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 742 144.9 2.7e-34 NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355) 742 144.9 2.7e-34 NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355) 742 144.9 2.7e-34 XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 742 144.9 2.7e-34 NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373) 742 144.9 2.8e-34 NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376) 742 144.9 2.8e-34 XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 742 145.0 3e-34 XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 742 145.0 3e-34 NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360) 738 144.2 4.5e-34 XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360) 738 144.2 4.5e-34 NP_000570 (OMIM: 601373,609532,610379,612522) C-C ( 352) 736 143.8 5.7e-34 NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352) 736 143.8 5.7e-34 NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374) 735 143.7 6.7e-34 NP_001287 (OMIM: 602648) atypical chemokine recept ( 384) 726 142.1 2.1e-33 NP_005192 (OMIM: 601834) C-C chemokine receptor ty ( 355) 723 141.5 2.9e-33 NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352) 697 136.8 7.3e-32 NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356) 697 136.8 7.4e-32 NP_001164643 (OMIM: 601470,607339,609423,613784) C ( 355) 696 136.6 8.3e-32 NP_001164642 (OMIM: 601470,607339,609423,613784) C ( 355) 696 136.6 8.3e-32 NP_001328 (OMIM: 601470,607339,609423,613784) CX3C ( 355) 696 136.6 8.3e-32 NP_001164645 (OMIM: 601470,607339,609423,613784) C ( 387) 696 136.7 8.8e-32 NP_001707 (OMIM: 601613) C-X-C chemokine receptor ( 372) 666 131.3 3.6e-30 NP_116743 (OMIM: 601613) C-X-C chemokine receptor ( 327) 659 130.0 7.9e-30 NP_057686 (OMIM: 600240) C-C chemokine receptor ty ( 362) 650 128.4 2.6e-29 XP_011531593 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342) 636 125.9 1.4e-28 >>NP_113597 (OMIM: 601835) C-C chemokine receptor type 6 (374 aa) initn: 2453 init1: 2453 opt: 2453 Z-score: 2395.8 bits: 452.0 E(85289): 1e-126 Smith-Waterman score: 2453; 100.0% identity (100.0% similar) in 374 aa overlap (1-374:1-374) 10 20 30 40 50 60 pF1KE1 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_113 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVFG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_113 LLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCKL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_113 LKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIISS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 STFVFNQKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFIVKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_113 STFVFNQKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFIVKT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLVTAANLGKMNRSCQSEKLIGYTKTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_113 LVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLVTAANLGKMNRSCQSEKLIGYTKTV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 TEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSCAGRYSENISRQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_113 TEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSCAGRYSENISRQT 310 320 330 340 350 360 370 pF1KE1 SETADNDNASSFTM :::::::::::::: NP_113 SETADNDNASSFTM 370 >>NP_004358 (OMIM: 601835) C-C chemokine receptor type 6 (374 aa) initn: 2453 init1: 2453 opt: 2453 Z-score: 2395.8 bits: 452.0 E(85289): 1e-126 Smith-Waterman score: 2453; 100.0% identity (100.0% similar) in 374 aa overlap (1-374:1-374) 10 20 30 40 50 60 pF1KE1 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVFG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 LLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 LLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCKL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIISS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 LKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIISS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 STFVFNQKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFIVKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 STFVFNQKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFIVKT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLVTAANLGKMNRSCQSEKLIGYTKTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 LVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLVTAANLGKMNRSCQSEKLIGYTKTV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 TEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSCAGRYSENISRQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 TEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSCAGRYSENISRQT 310 320 330 340 350 360 370 pF1KE1 SETADNDNASSFTM :::::::::::::: NP_004 SETADNDNASSFTM 370 >>NP_001288647 (OMIM: 600242) C-C chemokine receptor typ (372 aa) initn: 539 init1: 317 opt: 955 Z-score: 943.0 bits: 183.1 E(85289): 8.7e-46 Smith-Waterman score: 955; 42.1% identity (73.0% similar) in 366 aa overlap (13-373:20-371) 10 20 30 40 50 pF1KE1 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEML--LCSLQEVRQFSRLFVPI : : ... ::. :: .. ::: ..::.:. :.:: NP_001 MKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT---VDYTLFESLCSKKDVRNFKAWFLPI 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 AYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAW ::.:: ::::: :::.:. ..:. ..:::.::::.:.:::::.::::::: : :. .: NP_001 MYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYS-AAKSW 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 VFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVV ::. :::. .:: ..: ::::: :::.:::.:::::... : :.:.: ::. :. . NP_001 VFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCVGI 120 130 140 150 160 170 180 190 200 210 220 pF1KE1 WGLSVIISSSTFVFN--QKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGFFIPLMF : :....: .... :. ... . : . ..: .. . . ....::..::. NP_001 WILATVLSIPELLYSDLQRSSSEQAMRC----SLITEHVEAFITIQVAQMVIGFLVPLLA 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE1 MIFCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLV-TAANLGKMNRSC : ::: :..::.::.: .:.:::.::::::.::.. :.:.: :.:. :.::.. . .: NP_001 MSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTC 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE1 QSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSC . : .. . :: :: ..::.:: :::::: :::: ..:..::: :. .. . :: NP_001 ELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSC 300 310 320 330 340 350 350 360 370 pF1KE1 AGRYSENISRQTSETADNDNASSFTM :. :..: ... .....:. NP_001 --RHI----RRSSMSVEAETTTTFSP 360 370 >>NP_001288646 (OMIM: 600242) C-C chemokine receptor typ (372 aa) initn: 539 init1: 317 opt: 955 Z-score: 943.0 bits: 183.1 E(85289): 8.7e-46 Smith-Waterman score: 955; 42.1% identity (73.0% similar) in 366 aa overlap (13-373:20-371) 10 20 30 40 50 pF1KE1 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEML--LCSLQEVRQFSRLFVPI : : ... ::. :: .. ::: ..::.:. :.:: NP_001 MKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT---VDYTLFESLCSKKDVRNFKAWFLPI 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 AYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAW ::.:: ::::: :::.:. ..:. ..:::.::::.:.:::::.::::::: : :. .: NP_001 MYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYS-AAKSW 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 VFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVV ::. :::. .:: ..: ::::: :::.:::.:::::... : :.:.: ::. :. . NP_001 VFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCVGI 120 130 140 150 160 170 180 190 200 210 220 pF1KE1 WGLSVIISSSTFVFN--QKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGFFIPLMF : :....: .... :. ... . : . ..: .. . . ....::..::. NP_001 WILATVLSIPELLYSDLQRSSSEQAMRC----SLITEHVEAFITIQVAQMVIGFLVPLLA 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE1 MIFCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLV-TAANLGKMNRSC : ::: :..::.::.: .:.:::.::::::.::.. :.:.: :.:. :.::.. . .: NP_001 MSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTC 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE1 QSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSC . : .. . :: :: ..::.:: :::::: :::: ..:..::: :. .. . :: NP_001 ELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSC 300 310 320 330 340 350 350 360 370 pF1KE1 AGRYSENISRQTSETADNDNASSFTM :. :..: ... .....:. NP_001 --RHI----RRSSMSVEAETTTTFSP 360 370 >>NP_001288645 (OMIM: 600242) C-C chemokine receptor typ (372 aa) initn: 539 init1: 317 opt: 955 Z-score: 943.0 bits: 183.1 E(85289): 8.7e-46 Smith-Waterman score: 955; 42.1% identity (73.0% similar) in 366 aa overlap (13-373:20-371) 10 20 30 40 50 pF1KE1 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEML--LCSLQEVRQFSRLFVPI : : ... ::. :: .. ::: ..::.:. :.:: NP_001 MKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT---VDYTLFESLCSKKDVRNFKAWFLPI 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 AYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAW ::.:: ::::: :::.:. ..:. ..:::.::::.:.:::::.::::::: : :. .: NP_001 MYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYS-AAKSW 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 VFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVV ::. :::. .:: ..: ::::: :::.:::.:::::... : :.:.: ::. :. . NP_001 VFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCVGI 120 130 140 150 160 170 180 190 200 210 220 pF1KE1 WGLSVIISSSTFVFN--QKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGFFIPLMF : :....: .... :. ... . : . ..: .. . . ....::..::. NP_001 WILATVLSIPELLYSDLQRSSSEQAMRC----SLITEHVEAFITIQVAQMVIGFLVPLLA 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE1 MIFCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLV-TAANLGKMNRSC : ::: :..::.::.: .:.:::.::::::.::.. :.:.: :.:. :.::.. . .: NP_001 MSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTC 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE1 QSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSC . : .. . :: :: ..::.:: :::::: :::: ..:..::: :. .. . :: NP_001 ELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSC 300 310 320 330 340 350 350 360 370 pF1KE1 AGRYSENISRQTSETADNDNASSFTM :. :..: ... .....:. NP_001 --RHI----RRSSMSVEAETTTTFSP 360 370 >>NP_001829 (OMIM: 600242) C-C chemokine receptor type 7 (378 aa) initn: 539 init1: 317 opt: 955 Z-score: 942.9 bits: 183.2 E(85289): 8.8e-46 Smith-Waterman score: 955; 42.1% identity (73.0% similar) in 366 aa overlap (13-373:26-377) 10 20 30 40 pF1KE1 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEML--LCSLQEVRQFS : : ... ::. :: .. ::: ..::.:. NP_001 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT---VDYTLFESLCSKKDVRNFK 10 20 30 40 50 50 60 70 80 90 100 pF1KE1 RLFVPIAYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVS :.:: ::.:: ::::: :::.:. ..:. ..:::.::::.:.:::::.::::::: : NP_001 AWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYS 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 HATGAWVFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSK :. .:::. :::. .:: ..: ::::: :::.:::.:::::... : :.:.: :: NP_001 -AAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISK 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 IICLVVWGLSVIISSSTFVFN--QKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGF . :. .: :....: .... :. ... . : . ..: .. . . ....:: NP_001 LSCVGIWILATVLSIPELLYSDLQRSSSEQAMRC----SLITEHVEAFITIQVAQMVIGF 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE1 FIPLMFMIFCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLV-TAANLG ..::. : ::: :..::.::.: .:.:::.::::::.::.. :.:.: :.:. :.::.. NP_001 LVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFN 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE1 KMNRSCQSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYK . .:. : .. . :: :: ..::.:: :::::: :::: ..:..::: :. .. NP_001 ITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQL 300 310 320 330 340 350 350 360 370 pF1KE1 SSGFSCAGRYSENISRQTSETADNDNASSFTM . :: :. :..: ... .....:. NP_001 RQWSSC--RHI----RRSSMSVEAETTTTFSP 360 370 >>NP_001288643 (OMIM: 600242) C-C chemokine receptor typ (315 aa) initn: 476 init1: 254 opt: 881 Z-score: 872.0 bits: 169.8 E(85289): 7.8e-42 Smith-Waterman score: 881; 42.9% identity (74.4% similar) in 324 aa overlap (53-373:2-314) 30 40 50 60 70 80 pF1KE1 NTSYYSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVFGLLGNILVVITFAFYKKARSMTD ::.:: ::::: :::.:. ..:. ..::: NP_001 MYSIICFVGLLGNGLVVLTYIYFKRLKTMTD 10 20 30 90 100 110 120 130 140 pF1KE1 VYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCKLLKGIYAINFNCGMLLLTCISMD .::::.:.:::::.::::::: : :. .:::. :::. .:: ..: ::::: :::.: NP_001 TYLLNLAVADILFLLTLPFWAYS-AAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISID 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE1 RYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIISSSTFVFN--QKYNTQGSDVCEPK ::.:::::... : :.:.: ::. :. .: :....: .... :. ... . : NP_001 RYVAIVQAVSAHRHRARVLLISKLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRC--- 100 110 120 130 140 210 220 230 240 250 260 pF1KE1 YQTVSEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFIVKTLVQAQNSKRHKAIRVIIAVV . ..: .. . . ....::..::. : ::: :..::.::.: .:.:::.:::::: NP_001 -SLITEHVEAFITIQVAQMVIGFLVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVV 150 160 170 180 190 200 270 280 290 300 310 pF1KE1 LVFLACQIPHNMVLLV-TAANLGKMNRSCQSEKLIGYTKTVTEVLAFLHCCLNPVLYAFI .::.. :.:.: :.:. :.::.. . .:. : .. . :: :: ..::.:: ::::: NP_001 VVFIVFQLPYNGVVLAQTVANFNITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFI 210 220 230 240 250 260 320 330 340 350 360 370 pF1KE1 GQKFRNYFLKILKDLWCVRRKYKSSGFSCAGRYSENISRQTSETADNDNASSFTM : :::: ..:..::: :. .. . :: :. :..: ... .....:. NP_001 GVKFRNDLFKLFKDLGCLSQEQLRQWSSC--RHI----RRSSMSVEAETTTTFSP 270 280 290 300 310 >>NP_005499 (OMIM: 604836) C-C chemokine receptor type 4 (360 aa) initn: 887 init1: 367 opt: 880 Z-score: 870.4 bits: 169.7 E(85289): 9.6e-42 Smith-Waterman score: 880; 41.5% identity (74.4% similar) in 328 aa overlap (6-332:1-320) 10 20 30 40 50 60 pF1KE1 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVFG :: .:. :.. : :. ..:: .: :. . .. :..::.: :::. ::: NP_005 MNPTDIADTTLDE--SIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFG 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 LLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCKL :::: .::... ::. ::::::::::.::.:.:::..::::. .:. :::. . ::. NP_005 LLGNSVVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGY-YAADQWVFGLGLCKM 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 LKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIISS .. .: ..: :.... .:.:::.:::.:. : ::.::: . : :..:...:. : NP_005 ISWMYLVGFYSGIFFVMLMSIDRYLAIVHAV--FSLRARTLTYGVITSLATWSVAVFASL 120 130 140 150 160 170 190 200 210 220 230 pF1KE1 STFVFNQKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLEL-LFGFFIPLMFMIFCYTFIVK :.:. :. .. :. ::. : ::.: .::. ..:. ::: .:.:::..:.. NP_005 PGFLFSTCYTERNHTYCKTKYSLNSTT--WKVLS-SLEINILGLVIPLGIMLFCYSMIIR 180 190 200 210 220 240 250 260 270 280 290 pF1KE1 TLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLVTAANLGKMNRSCQSEKLIGYTKT :: . .: :..::...:.:::..::. :.:.::.. . .. ..: :. . :. NP_005 TLQHCKNEKKNKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQ 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE1 VTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSCAGRYSENISRQ .::.:::.::::::..: :.:.:::.:.:...: NP_005 ATETLAFVHCCLNPIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSY 290 300 310 320 330 340 360 370 pF1KE1 TSETADNDNASSFTM NP_005 TQSTMDHDLHDAL 350 360 >>XP_016861176 (OMIM: 604836) PREDICTED: C-C chemokine r (360 aa) initn: 887 init1: 367 opt: 880 Z-score: 870.4 bits: 169.7 E(85289): 9.6e-42 Smith-Waterman score: 880; 41.5% identity (74.4% similar) in 328 aa overlap (6-332:1-320) 10 20 30 40 50 60 pF1KE1 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVFG :: .:. :.. : :. ..:: .: :. . .. :..::.: :::. ::: XP_016 MNPTDIADTTLDE--SIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFG 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 LLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCKL :::: .::... ::. ::::::::::.::.:.:::..::::. .:. :::. . ::. XP_016 LLGNSVVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGY-YAADQWVFGLGLCKM 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 LKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIISS .. .: ..: :.... .:.:::.:::.:. : ::.::: . : :..:...:. : XP_016 ISWMYLVGFYSGIFFVMLMSIDRYLAIVHAV--FSLRARTLTYGVITSLATWSVAVFASL 120 130 140 150 160 170 190 200 210 220 230 pF1KE1 STFVFNQKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLEL-LFGFFIPLMFMIFCYTFIVK :.:. :. .. :. ::. : ::.: .::. ..:. ::: .:.:::..:.. XP_016 PGFLFSTCYTERNHTYCKTKYSLNSTT--WKVLS-SLEINILGLVIPLGIMLFCYSMIIR 180 190 200 210 220 240 250 260 270 280 290 pF1KE1 TLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLVTAANLGKMNRSCQSEKLIGYTKT :: . .: :..::...:.:::..::. :.:.::.. . .. ..: :. . :. XP_016 TLQHCKNEKKNKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQ 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE1 VTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSCAGRYSENISRQ .::.:::.::::::..: :.:.:::.:.:...: XP_016 ATETLAFVHCCLNPIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSY 290 300 310 320 330 340 360 370 pF1KE1 TSETADNDNASSFTM XP_016 TQSTMDHDLHDAL 350 360 >>NP_000625 (OMIM: 146929,609423) C-X-C chemokine recept (350 aa) initn: 808 init1: 232 opt: 877 Z-score: 867.6 bits: 169.1 E(85289): 1.4e-41 Smith-Waterman score: 877; 42.5% identity (75.5% similar) in 327 aa overlap (9-331:2-320) 10 20 30 40 50 pF1KE1 MSGESMNFSDVFDSSEDYFVSVN-TSYYSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVF :.. : . : ..: :.. .: .. : : :.. ... : :::.:. .. NP_000 MSNITDPQMWDFDDLNFTGMPPADEDYSPCML-ETETLNKYVVIIAYALVFLL 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 GLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHATGAWVFSNATCK .:::: ::.... . . .::.:::::::.:.::.::.::::.::.:...: :.:.. :: NP_000 SLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNG-WIFGTFLCK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 LLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSKIICLVVWGLSVIIS ... . .:: :.:::.:::.:::.:::.::... . . . :..:: ::::. .: NP_000 VVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLV---KFVCLGCWGLSMNLS 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 SSTFVFNQKYNTQGSD-VCEPKYQTV-SEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFI :.: : :. ..:. :: :... .. .:.... : :::..::. :.::: : NP_000 LPFFLFRQAYHPNNSSPVC---YEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFT 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE1 VKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLV-TAANLGKMNRSCQSEKLIGY ..:: .:. ...:.:.:::.::::.:: : .:.:.:::. : ...::. .. :: NP_000 LRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGR 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE1 TKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYKSSGFSCAGRYSENI . .::.:.::: ::::..::::::.::. ::::: NP_000 ALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYTSSSVN 290 300 310 320 330 340 360 370 pF1KE1 SRQTSETADNDNASSFTM NP_000 VSSNL 350 374 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:15:47 2016 done: Sun Nov 6 22:15:48 2016 Total Scan time: 7.090 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]