FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5206, 251 aa 1>>>pF1KE5206 251 - 251 aa - 251 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7131+/-0.000849; mu= 11.9405+/- 0.051 mean_var=66.5607+/-13.244, 0's: 0 Z-trim(106.5): 21 B-trim: 12 in 1/50 Lambda= 0.157205 statistics sampled from 8997 (9017) to 8997 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.277), width: 16 Scan time: 1.900 The best scores are: opt bits E(32554) CCDS4914.1 CLIC5 gene_id:53405|Hs108|chr6 ( 251) 1655 384.1 4.8e-107 CCDS47438.1 CLIC5 gene_id:53405|Hs108|chr6 ( 410) 1566 364.0 8.9e-101 CCDS59022.1 CLIC5 gene_id:53405|Hs108|chr6 ( 205) 1298 303.1 9.5e-83 CCDS256.1 CLIC4 gene_id:25932|Hs108|chr1 ( 253) 1278 298.6 2.7e-81 CCDS13638.1 CLIC6 gene_id:54102|Hs108|chr21 ( 686) 1215 284.5 1.3e-76 CCDS82669.1 CLIC6 gene_id:54102|Hs108|chr21 ( 704) 1194 279.7 3.6e-75 CCDS14767.1 CLIC2 gene_id:1193|Hs108|chrX ( 247) 1086 255.1 3.3e-68 CCDS4719.1 CLIC1 gene_id:1192|Hs108|chr6 ( 241) 1020 240.1 1e-63 CCDS7021.1 CLIC3 gene_id:9022|Hs108|chr9 ( 236) 771 183.6 1e-46 >>CCDS4914.1 CLIC5 gene_id:53405|Hs108|chr6 (251 aa) initn: 1655 init1: 1655 opt: 1655 Z-score: 2035.2 bits: 384.1 E(32554): 4.8e-107 Smith-Waterman score: 1655; 100.0% identity (100.0% similar) in 251 aa overlap (1-251:1-251) 10 20 30 40 50 60 pF1KE5 MTDSATANGDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 MTDSATANGDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 ADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 ADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 KFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 KFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS49 LTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELA 190 200 210 220 230 240 250 pF1KE5 YADVAKRLSRS ::::::::::: CCDS49 YADVAKRLSRS 250 >>CCDS47438.1 CLIC5 gene_id:53405|Hs108|chr6 (410 aa) initn: 1563 init1: 1563 opt: 1566 Z-score: 1922.7 bits: 364.0 E(32554): 8.9e-101 Smith-Waterman score: 1566; 97.9% identity (98.4% similar) in 243 aa overlap (9-251:168-410) 10 20 30 pF1KE5 MTDSATANGDDRDPEIELFVKAGIDGESIGNCPFSQRL : .::: ::::::::::::::::::::: CCDS47 PSSFTIQHSKAFSTTKYSCYSDAEGLEEKEGAHMNPEIYLFVKAGIDGESIGNCPFSQRL 140 150 160 170 180 190 40 50 60 70 80 90 pF1KE5 FMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 FMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTP 200 210 220 230 240 250 100 110 120 130 140 150 pF1KE5 EKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 EKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPE 260 270 280 290 300 310 160 170 180 190 200 210 pF1KE5 EIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 EIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYL 320 330 340 350 360 370 220 230 240 250 pF1KE5 KNAYARDEFTNTCAADSEIELAYADVAKRLSRS ::::::::::::::::::::::::::::::::: CCDS47 KNAYARDEFTNTCAADSEIELAYADVAKRLSRS 380 390 400 410 >>CCDS59022.1 CLIC5 gene_id:53405|Hs108|chr6 (205 aa) initn: 1298 init1: 1298 opt: 1298 Z-score: 1599.1 bits: 303.1 E(32554): 9.5e-83 Smith-Waterman score: 1298; 100.0% identity (100.0% similar) in 196 aa overlap (1-196:1-196) 10 20 30 40 50 60 pF1KE5 MTDSATANGDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 MTDSATANGDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 ADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 ADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 KFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 KFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELA :::::::::::::::: CCDS59 LTLADCNLLPKLHVVKEQVPLKGMI 190 200 >>CCDS256.1 CLIC4 gene_id:25932|Hs108|chr1 (253 aa) initn: 1304 init1: 1253 opt: 1278 Z-score: 1573.1 bits: 298.6 E(32554): 2.7e-81 Smith-Waterman score: 1278; 74.7% identity (89.3% similar) in 253 aa overlap (1-250:1-253) 10 20 30 40 50 pF1KE5 MTDSATANG---DDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLK :. : :: .:..: :::::::: :::::::::::::::::::::::::.::::::: CCDS25 MALSMPLNGLKEEDKEPLIELFVKAGSDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLK 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 RKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGID ::::::.::::::::::.:::..::::::::::::::.: : :: ::. :: ::::::.: CCDS25 RKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMD 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE5 IFSKFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLD ::.::::::::.. . : :::::: :.:.:::.:::.:::.::: :. . : : ::::: CCDS25 IFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLD 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE5 GDELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEI :.:.::::::::::::.::.:::::::.::: ::::.:::: :::.:::::::: .:.:. CCDS25 GNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNTCPSDKEV 190 200 210 220 230 240 240 250 pF1KE5 ELAYADVAKRLSRS :.::.::::::.. CCDS25 EIAYSDVAKRLTK 250 >>CCDS13638.1 CLIC6 gene_id:54102|Hs108|chr21 (686 aa) initn: 1265 init1: 1206 opt: 1215 Z-score: 1488.9 bits: 284.5 E(32554): 1.3e-76 Smith-Waterman score: 1215; 74.0% identity (90.5% similar) in 242 aa overlap (7-248:446-685) 10 20 30 pF1KE5 MTDSATANGDDRDPEIELFVKAGIDGESIGNCPFSQ : :...: : :::::: :::::::::::: CCDS13 HLAEEGPAEGSGEAARVNGRREDGEASEPRALGQEHD--ITLFVKAGYDGESIGNCPFSQ 420 430 440 450 460 470 40 50 60 70 80 90 pF1KE5 RLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETL :::::::::::.:::::::::::::::.::::::.:::.::.:.:::::::::::::: : CCDS13 RLFMILWLKGVIFNVTTVDLKRKPADLQNLAPGTNPPFMTFDGEVKTDVNKIEEFLEEKL 480 490 500 510 520 530 100 110 120 130 140 150 pF1KE5 TPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPL .: .::::...: :::.:: :.:.::::.:::::.. : :..: :::.:::.:::.:: CCDS13 APPRYPKLGTQHPESNSAGNDVFAKFSAFIKNTKKDANEIHEKNLLKALRKLDNYLNSPL 540 550 560 570 580 590 160 170 180 190 200 210 pF1KE5 PEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWR :.:::: . . : :::::::::::::::::::::..::::::::....:.::::.:: CCDS13 PDEIDAYSTEDVTVSGRKFLDGDELTLADCNLLPKLHIIKIVAKKYRDFEFPSEMTGIWR 600 610 620 630 640 650 220 230 240 250 pF1KE5 YLKNAYARDEFTNTCAADSEIELAYADVAKRLSRS ::.:::::::::::: ::.::: ::.:::::. CCDS13 YLNNAYARDEFTNTCPADQEIEHAYSDVAKRMK 660 670 680 >>CCDS82669.1 CLIC6 gene_id:54102|Hs108|chr21 (704 aa) initn: 1241 init1: 1182 opt: 1194 Z-score: 1463.0 bits: 279.7 E(32554): 3.6e-75 Smith-Waterman score: 1194; 72.4% identity (89.7% similar) in 243 aa overlap (6-248:462-703) 10 20 30 pF1KE5 MTDSATANGDDRDPEIELFVKAGIDGESIGNCPFS :: : .: :. ...:: ::::::::::: CCDS82 VNGRREDGEASEPRALGQEHDITLFVKVKLTALGCSR-IAIKKYLRAGYDGESIGNCPFS 440 450 460 470 480 490 40 50 60 70 80 90 pF1KE5 QRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEET ::::::::::::.:::::::::::::::.::::::.:::.::.:.:::::::::::::: CCDS82 QRLFMILWLKGVIFNVTTVDLKRKPADLQNLAPGTNPPFMTFDGEVKTDVNKIEEFLEEK 500 510 520 530 540 550 100 110 120 130 140 150 pF1KE5 LTPEKYPKLAAKHRESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTP :.: .::::...: :::.:: :.:.::::.:::::.. : :..: :::.:::.:::.: CCDS82 LAPPRYPKLGTQHPESNSAGNDVFAKFSAFIKNTKKDANEIHEKNLLKALRKLDNYLNSP 560 570 580 590 600 610 160 170 180 190 200 210 pF1KE5 LPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLW ::.:::: . . : :::::::::::::::::::::..::::::::....:.::::.: CCDS82 LPDEIDAYSTEDVTVSGRKFLDGDELTLADCNLLPKLHIIKIVAKKYRDFEFPSEMTGIW 620 630 640 650 660 670 220 230 240 250 pF1KE5 RYLKNAYARDEFTNTCAADSEIELAYADVAKRLSRS :::.:::::::::::: ::.::: ::.:::::. CCDS82 RYLNNAYARDEFTNTCPADQEIEHAYSDVAKRMK 680 690 700 >>CCDS14767.1 CLIC2 gene_id:1193|Hs108|chrX (247 aa) initn: 1147 init1: 1082 opt: 1086 Z-score: 1337.9 bits: 255.1 E(32554): 3.3e-68 Smith-Waterman score: 1086; 65.6% identity (86.7% similar) in 241 aa overlap (9-249:7-247) 10 20 30 40 50 60 pF1KE5 MTDSATANGDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP : . ::::::::::: :::::::::: :::::::::::: :::::::. ::: CCDS14 MSGLRPGTQVDPEIELFVKAGSDGESIGNCPFCQRLFMILWLKGVKFNVTTVDMTRKP 10 20 30 40 50 70 80 90 100 110 120 pF1KE5 ADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFS .:..:::::.::::..: ..::: :::::::.::.: .::.:. :..:: .: ..:. CCDS14 EELKDLAPGTNPPFLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSPKYKESFDVGCNLFA 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE5 KFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDE :::::::::... : .:..: : .:.::::::::: .::: .. : ::: :::::. CCDS14 KFSAYIKNTQKEANKNFEKSLLKEFKRLDDYLNTPLLDEIDPDSAEEPPVSRRLFLDGDQ 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE5 LTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELA ::::::.:::::...:..:::::..:::::..:.::::.:::::.:::.:: :.::: . CCDS14 LTLADCSLLPKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHTCPEDKEIENT 180 190 200 210 220 230 250 pF1KE5 YADVAKRLSRS ::.:::. : CCDS14 YANVAKQKS 240 >>CCDS4719.1 CLIC1 gene_id:1192|Hs108|chr6 (241 aa) initn: 1021 init1: 994 opt: 1020 Z-score: 1257.2 bits: 240.1 E(32554): 1e-63 Smith-Waterman score: 1020; 64.9% identity (84.5% similar) in 239 aa overlap (11-248:3-240) 10 20 30 40 50 60 pF1KE5 MTDSATANGDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP ...:..::::::: :: .::::::::::::.::::::.::::::: ::. CCDS47 MAEEQPQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRT 10 20 30 40 50 70 80 90 100 110 120 pF1KE5 ADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFS ...: :: . ::: .. .:.::.:::::::: .: : .:::::: . ::::::.:::. CCDS47 ETVQKLCPGGQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFA 60 70 80 90 100 110 130 140 150 160 170 pF1KE5 KFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKG-SRRKFLDGD ::::::::.. : ::.:: :::: ::.::..:::::.: .: .::.: :.::::::. CCDS47 KFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVD-ETSAEDEGVSQRKFLDGN 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE5 ELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIEL ::::::::::::::.:..: ::::.. :: . :. :::.:::::.::..:: : :::: CCDS47 ELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIEL 180 190 200 210 220 230 240 250 pF1KE5 AYADVAKRLSRS :: .::: : CCDS47 AYEQVAKALK 240 >>CCDS7021.1 CLIC3 gene_id:9022|Hs108|chr9 (236 aa) initn: 793 init1: 521 opt: 771 Z-score: 952.1 bits: 183.6 E(32554): 1e-46 Smith-Waterman score: 771; 52.0% identity (77.3% similar) in 229 aa overlap (13-241:3-229) 10 20 30 40 50 60 pF1KE5 MTDSATANGDDRDPEIELFVKAGIDGESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP . ...:::::. ::::.:.:: :::::.: :::: :..:::: .:.: CCDS70 MAETKLQLFVKASEDGESVGHCPSCQRLFMVLLLKGVPFTLTTVDTRRSP 10 20 30 40 50 70 80 90 100 110 120 pF1KE5 ADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKHRESNTAGIDIFS :...:::.. :.: ...:.:::. .::.:::::: : .:.:: ..::::::: :.: CCDS70 DVLKDFAPGSQLPILLYDSDAKTDTLQIEDFLEETLGPPDFPSLAPRYRESNTAGNDVFH 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE5 KFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDE ::::.::: .. :: . : .:: .::.:: .:: .:. .. . . :::.:::::. CCDS70 KFSAFIKNPVPAQDEALYQQLLRALARLDSYLRAPLEHELAGEP--QLRESRRRFLDGDR 120 130 140 150 160 190 200 210 220 230 240 pF1KE5 LTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCAADSEIELA ::::::.::::::.: : ..:. ::::. :. ::: .:. . :: :: ..:: : CCDS70 LTLADCSLLPKLHIVDTVCAHFRQAPIPAELRGVRRYLDSAMQEKEFKYTCPHSAEILAA 170 180 190 200 210 220 250 pF1KE5 YADVAKRLSRS : CCDS70 YRPAVHPR 230 251 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:30:10 2016 done: Mon Nov 7 22:30:10 2016 Total Scan time: 1.900 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]