FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3518, 691 aa 1>>>pF1KE3518 691 - 691 aa - 691 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1227+/-0.00107; mu= 16.4802+/- 0.065 mean_var=96.8943+/-19.422, 0's: 0 Z-trim(105.5): 51 B-trim: 0 in 0/50 Lambda= 0.130294 statistics sampled from 8453 (8486) to 8453 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.626), E-opt: 0.2 (0.261), width: 16 Scan time: 3.530 The best scores are: opt bits E(32554) CCDS3415.1 FBXL5 gene_id:26234|Hs108|chr4 ( 691) 4691 892.8 0 CCDS54745.1 FBXL5 gene_id:26234|Hs108|chr4 ( 674) 4378 834.0 0 >>CCDS3415.1 FBXL5 gene_id:26234|Hs108|chr4 (691 aa) initn: 4691 init1: 4691 opt: 4691 Z-score: 4768.7 bits: 892.8 E(32554): 0 Smith-Waterman score: 4691; 99.7% identity (99.7% similar) in 691 aa overlap (1-691:1-691) 10 20 30 40 50 60 pF1KE3 MAPFPEEVDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFTEFKMHEQI ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: CCDS34 MAPFPEEVDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFKEFKMHEQI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 QKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 TRSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TGSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY 610 620 630 640 650 660 670 680 690 pF1KE3 YCDNINGPHADTASGCQNLQCGFRACCRSGE ::::::::::::::::::::::::::::::: CCDS34 YCDNINGPHADTASGCQNLQCGFRACCRSGE 670 680 690 >>CCDS54745.1 FBXL5 gene_id:26234|Hs108|chr4 (674 aa) initn: 4378 init1: 4378 opt: 4378 Z-score: 4450.8 bits: 834.0 E(32554): 0 Smith-Waterman score: 4540; 97.3% identity (97.3% similar) in 691 aa overlap (1-691:1-674) 10 20 30 40 50 60 pF1KE3 MAPFPEEVDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFTEFKMHEQI :::::::::::::::::::::::::::: :::::: :::::::: CCDS54 MAPFPEEVDVFTAPHWRMKQLVGLYCDK-----------------SLYATFKEFKMHEQI 10 20 30 40 70 80 90 100 110 120 pF1KE3 ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 ENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFT 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE3 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 RDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNHAEER 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE3 QKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 QKFFKYSVDEKSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTK 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE3 TRSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 TGSLWKHLYPVHWARGDWYSGPATELDTEPDDEWVKNRKDESRAFHEWDEDADIDESEES 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE3 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 AEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEH 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE3 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTSHQSGFLK 350 360 370 380 390 400 430 440 450 460 470 480 pF1KE3 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 TSTSKITSTAWKNKDITMQSTKQYACLHDLTNKGIGEEIDNEHPWTKPVSSENFTSPYVW 410 420 430 440 450 460 490 500 510 520 530 540 pF1KE3 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 MLDAEDLADIEDTVEWRHRNVESLCVMETASNFSCSTSGCFSKDIVGLRTSVCWQQHCAS 470 480 490 500 510 520 550 560 570 580 590 600 pF1KE3 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 PAFAYCGHSFCCTGTALRTMSSLPESSAMCRKAARTRLPRGKDLIYFGSEKSDQETGRVL 530 540 550 560 570 580 610 620 630 640 650 660 pF1KE3 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 LFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQDLVSACPSLNDEYFY 590 600 610 620 630 640 670 680 690 pF1KE3 YCDNINGPHADTASGCQNLQCGFRACCRSGE ::::::::::::::::::::::::::::::: CCDS54 YCDNINGPHADTASGCQNLQCGFRACCRSGE 650 660 670 691 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:28:48 2016 done: Sun Nov 6 22:28:48 2016 Total Scan time: 3.530 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]