Result of FASTA (omim) for pFN21AE6214
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6214, 271 aa
  1>>>pF1KE6214 271 - 271 aa - 271 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7909+/-0.000318; mu= 13.5847+/- 0.020
 mean_var=86.5629+/-17.331, 0's: 0 Z-trim(118.3): 23  B-trim: 589 in 2/55
 Lambda= 0.137850
 statistics sampled from 31069 (31092) to 31069 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.365), width:  16
 Scan time:  6.310

The best scores are:                                      opt bits E(85289)
NP_001535 (OMIM: 111250,614088) intercellular adhe ( 271) 1828 372.8 3.6e-103
NP_001034221 (OMIM: 111250,614088) intercellular a ( 272)  912 190.7 2.5e-48
NP_003250 (OMIM: 601852) intercellular adhesion mo ( 924)  328 74.9 6.1e-13
XP_011526531 (OMIM: 601852) PREDICTED: intercellul ( 924)  328 74.9 6.1e-13
NP_000864 (OMIM: 146630) intercellular adhesion mo ( 275)  289 66.8   5e-11
NP_001093258 (OMIM: 146630) intercellular adhesion ( 275)  289 66.8   5e-11
NP_001093259 (OMIM: 146630) intercellular adhesion ( 275)  289 66.8   5e-11
NP_001093256 (OMIM: 146630) intercellular adhesion ( 275)  289 66.8   5e-11
NP_001093257 (OMIM: 146630) intercellular adhesion ( 275)  289 66.8   5e-11
NP_001307534 (OMIM: 146631) intercellular adhesion ( 451)  254 60.0 9.3e-09
NP_002153 (OMIM: 146631) intercellular adhesion mo ( 547)  255 60.2 9.4e-09
NP_000192 (OMIM: 147840,611162) intercellular adhe ( 532)  209 51.1 5.2e-06
NP_542413 (OMIM: 192225) vascular cell adhesion pr ( 647)  189 47.1 9.6e-05


>>NP_001535 (OMIM: 111250,614088) intercellular adhesion  (271 aa)
 initn: 1828 init1: 1828 opt: 1828  Z-score: 1973.2  bits: 372.8 E(85289): 3.6e-103
Smith-Waterman score: 1828; 100.0% identity (100.0% similar) in 271 aa overlap (1-271:1-271)

               10        20        30        40        50        60
pF1KE6 MGSLFPLSLLFFLAAAYPGVGSALGRRTKRAQSPKGSPLAPSGTSVPFWVRMSPEFVAVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGSLFPLSLLFFLAAAYPGVGSALGRRTKRAQSPKGSPLAPSGTSVPFWVRMSPEFVAVQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 PGKSVQLNCSNSCPQPQNSSLRTPLRQGKTLRGPGWVSYQLLDVRAWSSLAHCLVTCAGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGKSVQLNCSNSCPQPQNSSLRTPLRQGKTLRGPGWVSYQLLDVRAWSSLAHCLVTCAGK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 TRWATSRITAYKPPHSVILEPPVLKGRKYTLRCHVTQVFPVGYLVVTLRHGSRVIYSESL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRWATSRITAYKPPHSVILEPPVLKGRKYTLRCHVTQVFPVGYLVVTLRHGSRVIYSESL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE6 ERFTGLDLANVTLTYEFAAGPRDFWQPVICHARLNLDGLVVRNSSAPITLMLAWSPAPTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERFTGLDLANVTLTYEFAAGPRDFWQPVICHARLNLDGLVVRNSSAPITLMLAWSPAPTA
              190       200       210       220       230       240

              250       260       270 
pF1KE6 LASGSIAALVGILLTVGAAYLCKCLAMKSQA
       :::::::::::::::::::::::::::::::
NP_001 LASGSIAALVGILLTVGAAYLCKCLAMKSQA
              250       260       270 

>>NP_001034221 (OMIM: 111250,614088) intercellular adhes  (272 aa)
 initn: 910 init1: 910 opt: 912  Z-score: 988.6  bits: 190.7 E(85289): 2.5e-48
Smith-Waterman score: 912; 93.7% identity (96.5% similar) in 142 aa overlap (1-142:1-142)

               10        20        30        40        50        60
pF1KE6 MGSLFPLSLLFFLAAAYPGVGSALGRRTKRAQSPKGSPLAPSGTSVPFWVRMSPEFVAVQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGSLFPLSLLFFLAAAYPGVGSALGRRTKRAQSPKGSPLAPSGTSVPFWVRMSPEFVAVQ
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE6 PGKSVQLNCSNSCPQPQNSSLRTPLRQGKTLRGPGWVSYQLLDVRAWSSLAHCLVTCAGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PGKSVQLNCSNSCPQPQNSSLRTPLRQGKTLRGPGWVSYQLLDVRAWSSLAHCLVTCAGK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE6 TRWATSRITAYKPPHSVILEPPVLKGRKYTLRCHVTQVFPVGYLVVTLRHGSRVIYSESL
       :::::::::::. : ...   :                                      
NP_001 TRWATSRITAYSVPGGLLGGDPEAWKPGHLFRKPGALHRPGSGQRDLDLRVCCWTPRLLA
              130       140       150       160       170       180

>>NP_003250 (OMIM: 601852) intercellular adhesion molecu  (924 aa)
 initn: 273 init1: 250 opt: 328  Z-score: 353.3  bits: 74.9 E(85289): 6.1e-13
Smith-Waterman score: 328; 33.0% identity (57.7% similar) in 227 aa overlap (47-264:33-249)

         20        30        40        50        60        70      
pF1KE6 YPGVGSALGRRTKRAQSPKGSPLAPSGTSVPFWVRMSPEFVAVQPGKSVQLNCSNSCPQP
                                     :::. ..:. . :. : :. ::::..::.:
NP_003 GPSPGLRRALLGLWAALGLGLFGLSAVSQEPFWADLQPRVAFVERGGSLWLNCSTNCPRP
             10        20        30        40        50        60  

         80        90       100       110       120       130      
pF1KE6 QNSSLRTPLRQGKTLRGPGWVSYQLLDVRAWSSLAHCLVTCAGKTRWATSRITAYKPPHS
       . ..:.: ::.. : ::  :.. ::.:.:   .   :.  :: .:  : . : ... :  
NP_003 ERGGLETSLRRNGTQRGLRWLARQLVDIREPETQPVCFFRCARRTLQARGLIRTFQRPDR
             70        80        90       100       110       120  

        140          150       160       170       180         190 
pF1KE6 VILEP-PVLK--GRKYTLRCHVTQVFPVGYLVVTLRHGSRVIYSESLERFTGLD--LANV
       : : : :  .  :...:: :.:  . : . :..:: .:.. .  .:   :.:      ..
NP_003 VELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRS---FAGEPPRARGA
            130       140       150       160          170         

             200       210          220       230        240       
pF1KE6 TLTYEFAAGPRDFWQPVICHARLNL--DGL-VVRNSSAPITL-MLAWSPAPTALASGSIA
       .::    :  .:      :.:.:.:   :: . .:::::  :  .. ::    ::.    
NP_003 VLTATVLARREDHGANFSCRAELDLRPHGLGLFENSSAPRELRTFSLSPDAPRLAAPR--
     180       190       200       210       220       230         

       250       260       270                                     
pF1KE6 ALVGILLTVGAAYLCKCLAMKSQA                                    
            :: ::.    .:                                           
NP_003 -----LLEVGSERPVSCTLDGLFPASEARVYLALGDQNLSPDVTLEGDAFVATATATASA
            240       250       260       270       280       290  

>>XP_011526531 (OMIM: 601852) PREDICTED: intercellular a  (924 aa)
 initn: 273 init1: 250 opt: 328  Z-score: 353.3  bits: 74.9 E(85289): 6.1e-13
Smith-Waterman score: 328; 33.0% identity (57.7% similar) in 227 aa overlap (47-264:33-249)

         20        30        40        50        60        70      
pF1KE6 YPGVGSALGRRTKRAQSPKGSPLAPSGTSVPFWVRMSPEFVAVQPGKSVQLNCSNSCPQP
                                     :::. ..:. . :. : :. ::::..::.:
XP_011 GPSPGLRRALLGLWAALGLGLFGLSAVSQEPFWADLQPRVAFVERGGSLWLNCSTNCPRP
             10        20        30        40        50        60  

         80        90       100       110       120       130      
pF1KE6 QNSSLRTPLRQGKTLRGPGWVSYQLLDVRAWSSLAHCLVTCAGKTRWATSRITAYKPPHS
       . ..:.: ::.. : ::  :.. ::.:.:   .   :.  :: .:  : . : ... :  
XP_011 ERGGLETSLRRNGTQRGLRWLARQLVDIREPETQPVCFFRCARRTLQARGLIRTFQRPDR
             70        80        90       100       110       120  

        140          150       160       170       180         190 
pF1KE6 VILEP-PVLK--GRKYTLRCHVTQVFPVGYLVVTLRHGSRVIYSESLERFTGLD--LANV
       : : : :  .  :...:: :.:  . : . :..:: .:.. .  .:   :.:      ..
XP_011 VELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRS---FAGEPPRARGA
            130       140       150       160          170         

             200       210          220       230        240       
pF1KE6 TLTYEFAAGPRDFWQPVICHARLNL--DGL-VVRNSSAPITL-MLAWSPAPTALASGSIA
       .::    :  .:      :.:.:.:   :: . .:::::  :  .. ::    ::.    
XP_011 VLTATVLARREDHGANFSCRAELDLRPHGLGLFENSSAPRELRTFSLSPDAPRLAAPR--
     180       190       200       210       220       230         

       250       260       270                                     
pF1KE6 ALVGILLTVGAAYLCKCLAMKSQA                                    
            :: ::.    .:                                           
XP_011 -----LLEVGSERPVSCTLDGLFPASEARVYLALGDQNLSPDVTLEGDAFVATATATASA
            240       250       260       270       280       290  

>>NP_000864 (OMIM: 146630) intercellular adhesion molecu  (275 aa)
 initn: 196 init1:  95 opt: 289  Z-score: 318.9  bits: 66.8 E(85289): 5e-11
Smith-Waterman score: 289; 27.0% identity (62.2% similar) in 230 aa overlap (41-262:20-245)

               20        30        40        50        60        70
pF1KE6 FFLAAAYPGVGSALGRRTKRAQSPKGSPLAPSGTSVPFWVRMSPEFVAVQPGKSVQLNCS
                                     :..    : :.. :. .::.:  :...:::
NP_000            MSSFGYRTLTVALFTLICCPGSDEKVFEVHVRPKKLAVEPKGSLEVNCS
                          10        20        30        40         

               80        90       100       110       120       130
pF1KE6 NSCPQPQNSSLRTPLRQGKTLRGPGWVSYQLLDVRAWSSLAHCLVTCAGKTRWATSRITA
       ..: ::. ..:.: : .    .   :  : . .. . ... .:  ::.:: .  .: ...
NP_000 TTCNQPEVGGLETSLDKILLDEQAQWKHYLVSNI-SHDTVLQCHFTCSGKQESMNSNVSV
      50        60        70        80         90       100        

                140        150       160       170       180       
pF1KE6 YKPPHSVIL--EPPVLK-GRKYTLRCHVTQVFPVGYLVVTLRHGSRVIYSESLERFTGLD
       :.::..:::  .: ..  :...:..:.:  : :.  :.. : .:..... :.. . .   
NP_000 YQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAP
      110       120       130       140       150       160        

       190       200       210          220       230       240    
pF1KE6 LANVTLTYEFAAGPRDFWQPVICHARLNL---DGLVVRNSSAPITLMLAWSPAPTALASG
         ..: :.. .:  .:  .   : : :.:    : . .. :::  ..  . :.  .    
NP_000 -QEATATFNSTADREDGHRNFSCLAVLDLMSRGGNIFHKHSAP-KMLEIYEPVSDSQMV-
       170       180       190       200       210        220      

          250         260       270                      
pF1KE6 SIAALVGILLT--VGAAYLCKCLAMKSQA                     
        :...:..::.  : .. ::                              
NP_000 IIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTYGVRAAWRRLPQAFRP
         230       240       250       260       270     

>>NP_001093258 (OMIM: 146630) intercellular adhesion mol  (275 aa)
 initn: 196 init1:  95 opt: 289  Z-score: 318.9  bits: 66.8 E(85289): 5e-11
Smith-Waterman score: 289; 27.0% identity (62.2% similar) in 230 aa overlap (41-262:20-245)

               20        30        40        50        60        70
pF1KE6 FFLAAAYPGVGSALGRRTKRAQSPKGSPLAPSGTSVPFWVRMSPEFVAVQPGKSVQLNCS
                                     :..    : :.. :. .::.:  :...:::
NP_001            MSSFGYRTLTVALFTLICCPGSDEKVFEVHVRPKKLAVEPKGSLEVNCS
                          10        20        30        40         

               80        90       100       110       120       130
pF1KE6 NSCPQPQNSSLRTPLRQGKTLRGPGWVSYQLLDVRAWSSLAHCLVTCAGKTRWATSRITA
       ..: ::. ..:.: : .    .   :  : . .. . ... .:  ::.:: .  .: ...
NP_001 TTCNQPEVGGLETSLDKILLDEQAQWKHYLVSNI-SHDTVLQCHFTCSGKQESMNSNVSV
      50        60        70        80         90       100        

                140        150       160       170       180       
pF1KE6 YKPPHSVIL--EPPVLK-GRKYTLRCHVTQVFPVGYLVVTLRHGSRVIYSESLERFTGLD
       :.::..:::  .: ..  :...:..:.:  : :.  :.. : .:..... :.. . .   
NP_001 YQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAP
      110       120       130       140       150       160        

       190       200       210          220       230       240    
pF1KE6 LANVTLTYEFAAGPRDFWQPVICHARLNL---DGLVVRNSSAPITLMLAWSPAPTALASG
         ..: :.. .:  .:  .   : : :.:    : . .. :::  ..  . :.  .    
NP_001 -QEATATFNSTADREDGHRNFSCLAVLDLMSRGGNIFHKHSAP-KMLEIYEPVSDSQMV-
       170       180       190       200       210        220      

          250         260       270                      
pF1KE6 SIAALVGILLT--VGAAYLCKCLAMKSQA                     
        :...:..::.  : .. ::                              
NP_001 IIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTYGVRAAWRRLPQAFRP
         230       240       250       260       270     

>>NP_001093259 (OMIM: 146630) intercellular adhesion mol  (275 aa)
 initn: 196 init1:  95 opt: 289  Z-score: 318.9  bits: 66.8 E(85289): 5e-11
Smith-Waterman score: 289; 27.0% identity (62.2% similar) in 230 aa overlap (41-262:20-245)

               20        30        40        50        60        70
pF1KE6 FFLAAAYPGVGSALGRRTKRAQSPKGSPLAPSGTSVPFWVRMSPEFVAVQPGKSVQLNCS
                                     :..    : :.. :. .::.:  :...:::
NP_001            MSSFGYRTLTVALFTLICCPGSDEKVFEVHVRPKKLAVEPKGSLEVNCS
                          10        20        30        40         

               80        90       100       110       120       130
pF1KE6 NSCPQPQNSSLRTPLRQGKTLRGPGWVSYQLLDVRAWSSLAHCLVTCAGKTRWATSRITA
       ..: ::. ..:.: : .    .   :  : . .. . ... .:  ::.:: .  .: ...
NP_001 TTCNQPEVGGLETSLDKILLDEQAQWKHYLVSNI-SHDTVLQCHFTCSGKQESMNSNVSV
      50        60        70        80         90       100        

                140        150       160       170       180       
pF1KE6 YKPPHSVIL--EPPVLK-GRKYTLRCHVTQVFPVGYLVVTLRHGSRVIYSESLERFTGLD
       :.::..:::  .: ..  :...:..:.:  : :.  :.. : .:..... :.. . .   
NP_001 YQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAP
      110       120       130       140       150       160        

       190       200       210          220       230       240    
pF1KE6 LANVTLTYEFAAGPRDFWQPVICHARLNL---DGLVVRNSSAPITLMLAWSPAPTALASG
         ..: :.. .:  .:  .   : : :.:    : . .. :::  ..  . :.  .    
NP_001 -QEATATFNSTADREDGHRNFSCLAVLDLMSRGGNIFHKHSAP-KMLEIYEPVSDSQMV-
       170       180       190       200       210        220      

          250         260       270                      
pF1KE6 SIAALVGILLT--VGAAYLCKCLAMKSQA                     
        :...:..::.  : .. ::                              
NP_001 IIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTYGVRAAWRRLPQAFRP
         230       240       250       260       270     

>>NP_001093256 (OMIM: 146630) intercellular adhesion mol  (275 aa)
 initn: 196 init1:  95 opt: 289  Z-score: 318.9  bits: 66.8 E(85289): 5e-11
Smith-Waterman score: 289; 27.0% identity (62.2% similar) in 230 aa overlap (41-262:20-245)

               20        30        40        50        60        70
pF1KE6 FFLAAAYPGVGSALGRRTKRAQSPKGSPLAPSGTSVPFWVRMSPEFVAVQPGKSVQLNCS
                                     :..    : :.. :. .::.:  :...:::
NP_001            MSSFGYRTLTVALFTLICCPGSDEKVFEVHVRPKKLAVEPKGSLEVNCS
                          10        20        30        40         

               80        90       100       110       120       130
pF1KE6 NSCPQPQNSSLRTPLRQGKTLRGPGWVSYQLLDVRAWSSLAHCLVTCAGKTRWATSRITA
       ..: ::. ..:.: : .    .   :  : . .. . ... .:  ::.:: .  .: ...
NP_001 TTCNQPEVGGLETSLDKILLDEQAQWKHYLVSNI-SHDTVLQCHFTCSGKQESMNSNVSV
      50        60        70        80         90       100        

                140        150       160       170       180       
pF1KE6 YKPPHSVIL--EPPVLK-GRKYTLRCHVTQVFPVGYLVVTLRHGSRVIYSESLERFTGLD
       :.::..:::  .: ..  :...:..:.:  : :.  :.. : .:..... :.. . .   
NP_001 YQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAP
      110       120       130       140       150       160        

       190       200       210          220       230       240    
pF1KE6 LANVTLTYEFAAGPRDFWQPVICHARLNL---DGLVVRNSSAPITLMLAWSPAPTALASG
         ..: :.. .:  .:  .   : : :.:    : . .. :::  ..  . :.  .    
NP_001 -QEATATFNSTADREDGHRNFSCLAVLDLMSRGGNIFHKHSAP-KMLEIYEPVSDSQMV-
       170       180       190       200       210        220      

          250         260       270                      
pF1KE6 SIAALVGILLT--VGAAYLCKCLAMKSQA                     
        :...:..::.  : .. ::                              
NP_001 IIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTYGVRAAWRRLPQAFRP
         230       240       250       260       270     

>>NP_001093257 (OMIM: 146630) intercellular adhesion mol  (275 aa)
 initn: 196 init1:  95 opt: 289  Z-score: 318.9  bits: 66.8 E(85289): 5e-11
Smith-Waterman score: 289; 27.0% identity (62.2% similar) in 230 aa overlap (41-262:20-245)

               20        30        40        50        60        70
pF1KE6 FFLAAAYPGVGSALGRRTKRAQSPKGSPLAPSGTSVPFWVRMSPEFVAVQPGKSVQLNCS
                                     :..    : :.. :. .::.:  :...:::
NP_001            MSSFGYRTLTVALFTLICCPGSDEKVFEVHVRPKKLAVEPKGSLEVNCS
                          10        20        30        40         

               80        90       100       110       120       130
pF1KE6 NSCPQPQNSSLRTPLRQGKTLRGPGWVSYQLLDVRAWSSLAHCLVTCAGKTRWATSRITA
       ..: ::. ..:.: : .    .   :  : . .. . ... .:  ::.:: .  .: ...
NP_001 TTCNQPEVGGLETSLDKILLDEQAQWKHYLVSNI-SHDTVLQCHFTCSGKQESMNSNVSV
      50        60        70        80         90       100        

                140        150       160       170       180       
pF1KE6 YKPPHSVIL--EPPVLK-GRKYTLRCHVTQVFPVGYLVVTLRHGSRVIYSESLERFTGLD
       :.::..:::  .: ..  :...:..:.:  : :.  :.. : .:..... :.. . .   
NP_001 YQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAP
      110       120       130       140       150       160        

       190       200       210          220       230       240    
pF1KE6 LANVTLTYEFAAGPRDFWQPVICHARLNL---DGLVVRNSSAPITLMLAWSPAPTALASG
         ..: :.. .:  .:  .   : : :.:    : . .. :::  ..  . :.  .    
NP_001 -QEATATFNSTADREDGHRNFSCLAVLDLMSRGGNIFHKHSAP-KMLEIYEPVSDSQMV-
       170       180       190       200       210        220      

          250         260       270                      
pF1KE6 SIAALVGILLT--VGAAYLCKCLAMKSQA                     
        :...:..::.  : .. ::                              
NP_001 IIVTVVSVLLSLFVTSVLLCFIFGQHLRQQRMGTYGVRAAWRRLPQAFRP
         230       240       250       260       270     

>>NP_001307534 (OMIM: 146631) intercellular adhesion mol  (451 aa)
 initn: 118 init1:  95 opt: 254  Z-score: 278.2  bits: 60.0 E(85289): 9.3e-09
Smith-Waterman score: 254; 32.2% identity (59.3% similar) in 199 aa overlap (39-227:23-210)

       10        20        30        40        50        60        
pF1KE6 LLFFLAAAYPGVGSALGRRTKRAQSPKGSPLAPSGTSVPFWVRMSPEFVAVQPGKSVQLN
                                     :.:.  .  : .:. :.  ... : :. .:
NP_001         MATMVPSVLWPRACWTLLVCCLLTPGVQGQEFLLRVEPQNPVLSAGGSLFVN
                       10        20        30        40        50  

       70        80        90       100       110       120        
pF1KE6 CSNSCPQPQNSSLRTPLRQGKTLRGPGWVSYQLLDVRAWSSLAHCLVTCAGKTRWATSRI
       ::..::. .. .:.: : .  .  : ::....: .: . : .  : : : :.   ..: :
NP_001 CSTDCPSSEKIALETSLSKELVASGMGWAAFNLSNVTGNSRIL-CSVYCNGSQITGSSNI
             60        70        80        90        100       110 

      130       140            150       160       170       180   
pF1KE6 TAYKPPHSVILEP-----PVLKGRKYTLRCHVTQVFPVGYLVVTLRHGSRVIYSESLERF
       :.:. :. : : :     ::  :...::::.: .  :   :.:.:     . . : : : 
NP_001 TVYRLPERVELAPLPPWQPV--GQNFTLRCQVEDGSPRTSLTVVL-----LRWEEELSRQ
             120       130         140       150            160    

            190       200       210           220       230        
pF1KE6 TGLDL-ANVTLTYEFAAGPRDFWQPVICHARLNLD----GLVVRNSSAPITLMLAWSPAP
        ...  :.:: :    :.  :   :  :...:...    :: : :.:::           
NP_001 PAVEEPAEVTATV--LASRDDHGAPFSCRTELDMQPQGLGLFV-NTSAPRQLRTFGFLGP
          170         180       190       200        210       220 

      240       250       260       270                            
pF1KE6 TALASGSIAALVGILLTVGAAYLCKCLAMKSQA                           
                                                                   
NP_001 IVNLSEPTAHEGSTVTVSCMAGARVQVTLDGVPAAAPGQPAQLQLNATESDDGRSFFCSA
             230       240       250       260       270       280 




271 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 11:09:03 2016 done: Tue Nov  8 11:09:04 2016
 Total Scan time:  6.310 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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