FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1475, 164 aa 1>>>pF1KE1475 164 - 164 aa - 164 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3686+/-0.000724; mu= 12.4982+/- 0.044 mean_var=73.3224+/-14.237, 0's: 0 Z-trim(109.8): 11 B-trim: 0 in 0/51 Lambda= 0.149781 statistics sampled from 11122 (11125) to 11122 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.726), E-opt: 0.2 (0.342), width: 16 Scan time: 1.350 The best scores are: opt bits E(32554) CCDS1261.1 CD247 gene_id:919|Hs108|chr1 ( 164) 1097 245.5 1.1e-65 CCDS1260.1 CD247 gene_id:919|Hs108|chr1 ( 163) 1078 241.4 1.8e-64 >>CCDS1261.1 CD247 gene_id:919|Hs108|chr1 (164 aa) initn: 1097 init1: 1097 opt: 1097 Z-score: 1292.9 bits: 245.5 E(32554): 1.1e-65 Smith-Waterman score: 1097; 100.0% identity (100.0% similar) in 164 aa overlap (1-164:1-164) 10 20 30 40 50 60 pF1KE1 MKWKALFTAAILQAQLPITEAQSFGLLDPKLCYLLDGILFIYGVILTALFLRVKFSRSAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MKWKALFTAAILQAQLPITEAQSFGLLDPKLCYLLDGILFIYGVILTALFLRVKFSRSAD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 APAYQQGQNQLYNELNLGRREEYDVLDKRRGRDPEMGGKPQRRKNPQEGLYNELQKDKMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 APAYQQGQNQLYNELNLGRREEYDVLDKRRGRDPEMGGKPQRRKNPQEGLYNELQKDKMA 70 80 90 100 110 120 130 140 150 160 pF1KE1 EAYSEIGMKGERRRGKGHDGLYQGLSTATKDTYDALHMQALPPR :::::::::::::::::::::::::::::::::::::::::::: CCDS12 EAYSEIGMKGERRRGKGHDGLYQGLSTATKDTYDALHMQALPPR 130 140 150 160 >>CCDS1260.1 CD247 gene_id:919|Hs108|chr1 (163 aa) initn: 697 init1: 675 opt: 1078 Z-score: 1270.8 bits: 241.4 E(32554): 1.8e-64 Smith-Waterman score: 1078; 99.4% identity (99.4% similar) in 164 aa overlap (1-164:1-163) 10 20 30 40 50 60 pF1KE1 MKWKALFTAAILQAQLPITEAQSFGLLDPKLCYLLDGILFIYGVILTALFLRVKFSRSAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MKWKALFTAAILQAQLPITEAQSFGLLDPKLCYLLDGILFIYGVILTALFLRVKFSRSAD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 APAYQQGQNQLYNELNLGRREEYDVLDKRRGRDPEMGGKPQRRKNPQEGLYNELQKDKMA :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: CCDS12 APAYQQGQNQLYNELNLGRREEYDVLDKRRGRDPEMGGKP-RRKNPQEGLYNELQKDKMA 70 80 90 100 110 130 140 150 160 pF1KE1 EAYSEIGMKGERRRGKGHDGLYQGLSTATKDTYDALHMQALPPR :::::::::::::::::::::::::::::::::::::::::::: CCDS12 EAYSEIGMKGERRRGKGHDGLYQGLSTATKDTYDALHMQALPPR 120 130 140 150 160 164 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:38:29 2016 done: Sun Nov 6 22:38:29 2016 Total Scan time: 1.350 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]