FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2235, 102 aa 1>>>pF1KE2235 102 - 102 aa - 102 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7750+/-0.000288; mu= 11.8681+/- 0.018 mean_var=53.2724+/-10.573, 0's: 0 Z-trim(117.1): 2 B-trim: 637 in 1/53 Lambda= 0.175721 statistics sampled from 28776 (28778) to 28776 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.746), E-opt: 0.2 (0.337), width: 16 Scan time: 4.210 The best scores are: opt bits E(85289) NP_002148 (OMIM: 600141) 10 kDa heat shock protein ( 102) 656 173.4 5.5e-44 >>NP_002148 (OMIM: 600141) 10 kDa heat shock protein, mi (102 aa) initn: 656 init1: 656 opt: 656 Z-score: 910.7 bits: 173.4 E(85289): 5.5e-44 Smith-Waterman score: 656; 100.0% identity (100.0% similar) in 102 aa overlap (1-102:1-102) 10 20 30 40 50 60 pF1KE2 MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEI 10 20 30 40 50 60 70 80 90 100 pF1KE2 QPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD :::::::::::::::::::::::::::::::::::::::::: NP_002 QPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD 70 80 90 100 102 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:41:13 2016 done: Sun Nov 6 22:41:14 2016 Total Scan time: 4.210 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]