FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2235, 102 aa 1>>>pF1KE2235 102 - 102 aa - 102 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9831+/-0.000582; mu= 10.5874+/- 0.035 mean_var=51.6200+/-10.013, 0's: 0 Z-trim(110.4): 6 B-trim: 0 in 0/54 Lambda= 0.178511 statistics sampled from 11562 (11564) to 11562 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.756), E-opt: 0.2 (0.355), width: 16 Scan time: 1.150 The best scores are: opt bits E(32554) CCDS2320.1 HSPE1 gene_id:3336|Hs108|chr2 ( 102) 656 176.0 3.7e-45 CCDS63079.1 MOB4 gene_id:100529241|Hs108|chr2 ( 261) 348 96.8 6.4e-21 >>CCDS2320.1 HSPE1 gene_id:3336|Hs108|chr2 (102 aa) initn: 656 init1: 656 opt: 656 Z-score: 924.3 bits: 176.0 E(32554): 3.7e-45 Smith-Waterman score: 656; 100.0% identity (100.0% similar) in 102 aa overlap (1-102:1-102) 10 20 30 40 50 60 pF1KE2 MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS23 MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEI 10 20 30 40 50 60 70 80 90 100 pF1KE2 QPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD :::::::::::::::::::::::::::::::::::::::::: CCDS23 QPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD 70 80 90 100 >>CCDS63079.1 MOB4 gene_id:100529241|Hs108|chr2 (261 aa) initn: 348 init1: 348 opt: 348 Z-score: 489.1 bits: 96.8 E(32554): 6.4e-21 Smith-Waterman score: 348; 100.0% identity (100.0% similar) in 56 aa overlap (1-56:1-56) 10 20 30 40 50 60 pF1KE2 MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS63 MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKDFYN 10 20 30 40 50 60 70 80 90 100 pF1KE2 QPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD CCDS63 WPDESFDEMDSTLAVQQYIQQNIRADCSNIDKILEPPEGQDEGVWKYEHLRQFCLELNGL 70 80 90 100 110 120 102 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:41:13 2016 done: Sun Nov 6 22:41:13 2016 Total Scan time: 1.150 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]