FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3623, 148 aa 1>>>pF1KE3623 148 - 148 aa - 148 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8248+/-0.000293; mu= 14.1696+/- 0.018 mean_var=58.2500+/-11.505, 0's: 0 Z-trim(118.7): 15 B-trim: 0 in 0/49 Lambda= 0.168045 statistics sampled from 31904 (31919) to 31904 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.743), E-opt: 0.2 (0.374), width: 16 Scan time: 4.770 The best scores are: opt bits E(85289) NP_005847 (OMIM: 605155) receptor activity-modifyi ( 148) 1044 260.5 7.2e-70 XP_006715694 (OMIM: 605155) PREDICTED: receptor ac ( 259) 919 230.3 1.5e-60 XP_016867155 (OMIM: 605155) PREDICTED: receptor ac ( 116) 813 204.4 4.2e-53 NP_005846 (OMIM: 605153) receptor activity-modifyi ( 148) 297 79.4 2.4e-15 XP_016858642 (OMIM: 605153) PREDICTED: receptor ac ( 126) 294 78.6 3.4e-15 XP_016858643 (OMIM: 605153) PREDICTED: receptor ac ( 126) 294 78.6 3.4e-15 XP_016858645 (OMIM: 605153) PREDICTED: receptor ac ( 126) 294 78.6 3.4e-15 NP_001295282 (OMIM: 605153) receptor activity-modi ( 126) 294 78.6 3.4e-15 XP_016858641 (OMIM: 605153) PREDICTED: receptor ac ( 126) 294 78.6 3.4e-15 NP_005845 (OMIM: 605154) receptor activity-modifyi ( 175) 248 67.6 1e-11 >>NP_005847 (OMIM: 605155) receptor activity-modifying p (148 aa) initn: 1044 init1: 1044 opt: 1044 Z-score: 1375.4 bits: 260.5 E(85289): 7.2e-70 Smith-Waterman score: 1044; 100.0% identity (100.0% similar) in 148 aa overlap (1-148:1-148) 10 20 30 40 50 60 pF1KE3 METGALRRPQLLPLLLLLCGGCPRAGGCNETGMLERLPLCGKAFADMMGKVDVWKWCNLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 METGALRRPQLLPLLLLLCGGCPRAGGCNETGMLERLPLCGKAFADMMGKVDVWKWCNLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EFIVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVHLEDPPDEVLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 EFIVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVHLEDPPDEVLI 70 80 90 100 110 120 130 140 pF1KE3 PLIVIPVVLTVAMAGLVVWRSKRTDTLL :::::::::::::::::::::::::::: NP_005 PLIVIPVVLTVAMAGLVVWRSKRTDTLL 130 140 >>XP_006715694 (OMIM: 605155) PREDICTED: receptor activi (259 aa) initn: 919 init1: 919 opt: 919 Z-score: 1208.1 bits: 230.3 E(85289): 1.5e-60 Smith-Waterman score: 919; 100.0% identity (100.0% similar) in 129 aa overlap (20-148:131-259) 10 20 30 40 pF1KE3 METGALRRPQLLPLLLLLCGGCPRAGGCNETGMLERLPLCGKAFADMMG :::::::::::::::::::::::::::::: XP_006 SLSSGSVPVGHLEGGTVKLQKDTGLHSCRDGGCPRAGGCNETGMLERLPLCGKAFADMMG 110 120 130 140 150 160 50 60 70 80 90 100 pF1KE3 KVDVWKWCNLSEFIVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 KVDVWKWCNLSEFIVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRV 170 180 190 200 210 220 110 120 130 140 pF1KE3 HLEDPPDEVLIPLIVIPVVLTVAMAGLVVWRSKRTDTLL ::::::::::::::::::::::::::::::::::::::: XP_006 HLEDPPDEVLIPLIVIPVVLTVAMAGLVVWRSKRTDTLL 230 240 250 >>XP_016867155 (OMIM: 605155) PREDICTED: receptor activi (116 aa) initn: 813 init1: 813 opt: 813 Z-score: 1074.3 bits: 204.4 E(85289): 4.2e-53 Smith-Waterman score: 813; 100.0% identity (100.0% similar) in 116 aa overlap (33-148:1-116) 10 20 30 40 50 60 pF1KE3 TGALRRPQLLPLLLLLCGGCPRAGGCNETGMLERLPLCGKAFADMMGKVDVWKWCNLSEF :::::::::::::::::::::::::::::: XP_016 MLERLPLCGKAFADMMGKVDVWKWCNLSEF 10 20 30 70 80 90 100 110 120 pF1KE3 IVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVHLEDPPDEVLIPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 IVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVHLEDPPDEVLIPL 40 50 60 70 80 90 130 140 pF1KE3 IVIPVVLTVAMAGLVVWRSKRTDTLL :::::::::::::::::::::::::: XP_016 IVIPVVLTVAMAGLVVWRSKRTDTLL 100 110 >>NP_005846 (OMIM: 605153) receptor activity-modifying p (148 aa) initn: 300 init1: 286 opt: 297 Z-score: 396.6 bits: 79.4 E(85289): 2.4e-15 Smith-Waterman score: 297; 34.3% identity (63.5% similar) in 137 aa overlap (14-148:13-148) 10 20 30 40 50 pF1KE3 METGALRRPQLLPLLLLLCGGCPRAGGCNET--GMLERLPLCGKAFADMMGKVDVWKWCN : ::: . .:.:. : : : :: : : : ::. NP_005 MARALCRLPRRGLWLLLAHHLFMTTACQEANYGALLR-ELCLTQFQVDMEAVGETLWCD 10 20 30 40 50 60 70 80 90 100 110 pF1KE3 LSEFIVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVHLEDPPDEV .. : :. ...:: :. .::.::: .. :. ..: ..: .: .. ..::: . NP_005 WGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGSI 60 70 80 90 100 110 120 130 140 pF1KE3 LIPLIVIPVVLTVAMAGLVVWRSKRTDTLL : :.::.:...:. ...::::.::::. .. NP_005 LYPFIVVPITVTLLVTALVVWQSKRTEGIV 120 130 140 >>XP_016858642 (OMIM: 605153) PREDICTED: receptor activi (126 aa) initn: 300 init1: 286 opt: 294 Z-score: 393.7 bits: 78.6 E(85289): 3.4e-15 Smith-Waterman score: 294; 35.0% identity (65.9% similar) in 123 aa overlap (28-148:5-126) 10 20 30 40 50 pF1KE3 METGALRRPQLLPLLLLLCGGCPRAGGCNET--GMLERLPLCGKAFADMMGKVDVWKWCN :.:. : : : :: : : : ::. XP_016 MTTACQEANYGALLR-ELCLTQFQVDMEAVGETLWCD 10 20 30 60 70 80 90 100 110 pF1KE3 LSEFIVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVHLEDPPDEV .. : :. ...:: :. .::.::: .. :. ..: ..: .: .. ..::: . XP_016 WGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGSI 40 50 60 70 80 90 120 130 140 pF1KE3 LIPLIVIPVVLTVAMAGLVVWRSKRTDTLL : :.::.:...:. ...::::.::::. .. XP_016 LYPFIVVPITVTLLVTALVVWQSKRTEGIV 100 110 120 >>XP_016858643 (OMIM: 605153) PREDICTED: receptor activi (126 aa) initn: 300 init1: 286 opt: 294 Z-score: 393.7 bits: 78.6 E(85289): 3.4e-15 Smith-Waterman score: 294; 35.0% identity (65.9% similar) in 123 aa overlap (28-148:5-126) 10 20 30 40 50 pF1KE3 METGALRRPQLLPLLLLLCGGCPRAGGCNET--GMLERLPLCGKAFADMMGKVDVWKWCN :.:. : : : :: : : : ::. XP_016 MTTACQEANYGALLR-ELCLTQFQVDMEAVGETLWCD 10 20 30 60 70 80 90 100 110 pF1KE3 LSEFIVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVHLEDPPDEV .. : :. ...:: :. .::.::: .. :. ..: ..: .: .. ..::: . XP_016 WGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGSI 40 50 60 70 80 90 120 130 140 pF1KE3 LIPLIVIPVVLTVAMAGLVVWRSKRTDTLL : :.::.:...:. ...::::.::::. .. XP_016 LYPFIVVPITVTLLVTALVVWQSKRTEGIV 100 110 120 >>XP_016858645 (OMIM: 605153) PREDICTED: receptor activi (126 aa) initn: 300 init1: 286 opt: 294 Z-score: 393.7 bits: 78.6 E(85289): 3.4e-15 Smith-Waterman score: 294; 35.0% identity (65.9% similar) in 123 aa overlap (28-148:5-126) 10 20 30 40 50 pF1KE3 METGALRRPQLLPLLLLLCGGCPRAGGCNET--GMLERLPLCGKAFADMMGKVDVWKWCN :.:. : : : :: : : : ::. XP_016 MTTACQEANYGALLR-ELCLTQFQVDMEAVGETLWCD 10 20 30 60 70 80 90 100 110 pF1KE3 LSEFIVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVHLEDPPDEV .. : :. ...:: :. .::.::: .. :. ..: ..: .: .. ..::: . XP_016 WGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGSI 40 50 60 70 80 90 120 130 140 pF1KE3 LIPLIVIPVVLTVAMAGLVVWRSKRTDTLL : :.::.:...:. ...::::.::::. .. XP_016 LYPFIVVPITVTLLVTALVVWQSKRTEGIV 100 110 120 >>NP_001295282 (OMIM: 605153) receptor activity-modifyin (126 aa) initn: 300 init1: 286 opt: 294 Z-score: 393.7 bits: 78.6 E(85289): 3.4e-15 Smith-Waterman score: 294; 35.0% identity (65.9% similar) in 123 aa overlap (28-148:5-126) 10 20 30 40 50 pF1KE3 METGALRRPQLLPLLLLLCGGCPRAGGCNET--GMLERLPLCGKAFADMMGKVDVWKWCN :.:. : : : :: : : : ::. NP_001 MTTACQEANYGALLR-ELCLTQFQVDMEAVGETLWCD 10 20 30 60 70 80 90 100 110 pF1KE3 LSEFIVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVHLEDPPDEV .. : :. ...:: :. .::.::: .. :. ..: ..: .: .. ..::: . NP_001 WGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGSI 40 50 60 70 80 90 120 130 140 pF1KE3 LIPLIVIPVVLTVAMAGLVVWRSKRTDTLL : :.::.:...:. ...::::.::::. .. NP_001 LYPFIVVPITVTLLVTALVVWQSKRTEGIV 100 110 120 >>XP_016858641 (OMIM: 605153) PREDICTED: receptor activi (126 aa) initn: 300 init1: 286 opt: 294 Z-score: 393.7 bits: 78.6 E(85289): 3.4e-15 Smith-Waterman score: 294; 35.0% identity (65.9% similar) in 123 aa overlap (28-148:5-126) 10 20 30 40 50 pF1KE3 METGALRRPQLLPLLLLLCGGCPRAGGCNET--GMLERLPLCGKAFADMMGKVDVWKWCN :.:. : : : :: : : : ::. XP_016 MTTACQEANYGALLR-ELCLTQFQVDMEAVGETLWCD 10 20 30 60 70 80 90 100 110 pF1KE3 LSEFIVYYESFTNCTEMEANVVGCYWPNPLAQGFITGIHRQFFSNCTVDRVHLEDPPDEV .. : :. ...:: :. .::.::: .. :. ..: ..: .: .. ..::: . XP_016 WGRTIRSYRELADCTWHMAEKLGCFWPNAEVDRFFLAVHGRYFRSCPISGRAVRDPPGSI 40 50 60 70 80 90 120 130 140 pF1KE3 LIPLIVIPVVLTVAMAGLVVWRSKRTDTLL : :.::.:...:. ...::::.::::. .. XP_016 LYPFIVVPITVTLLVTALVVWQSKRTEGIV 100 110 120 >>NP_005845 (OMIM: 605154) receptor activity-modifying p (175 aa) initn: 285 init1: 224 opt: 248 Z-score: 331.4 bits: 67.6 E(85289): 1e-11 Smith-Waterman score: 248; 28.9% identity (56.3% similar) in 142 aa overlap (4-145:32-172) 10 20 30 pF1KE3 METGALRRPQLLPLLLLLCGGCPRAGGCNETGM ::. :. : : : . : . .. NP_005 ASLRVERAGGPRLPRTRVGRPAALRLLLLLGAVLNPHEALAQPLPTTGTPGSEGGTVKNY 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE3 LERLPLCGKAFADMMGKVDVWKWCNLSEFIVYYESFTNCTEMEANVVGCYWPNPLAQGFI . .: . . :.: .. ::. . . : .. .: : :.. .:::::. .: NP_005 ETAVQFCWNHYKDQMDPIEK-DWCDWAMISRPYSTLRDCLEHFAELFDLGFPNPLAERII 70 80 90 100 110 120 100 110 120 130 140 pF1KE3 TGIHRQFFSNCTVDRVHLEDPPDEVLIPLIVIPVVLTVAMAGLVVWRSKRTDTLL :. :.::.. . . :::..::. .:. :. : . ::::::: .. NP_005 FETHQIHFANCSLVQPTFSDPPEDVLLAMIIAPICLIPFLITLVVWRSKDSEAQA 130 140 150 160 170 148 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:43:06 2016 done: Sun Nov 6 22:43:07 2016 Total Scan time: 4.770 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]