FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6150, 137 aa 1>>>pF1KE6150 137 - 137 aa - 137 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0456+/-0.00084; mu= 11.6990+/- 0.050 mean_var=52.1756+/-10.278, 0's: 0 Z-trim(104.8): 22 B-trim: 0 in 0/49 Lambda= 0.177558 statistics sampled from 8074 (8096) to 8074 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.249), width: 16 Scan time: 1.100 The best scores are: opt bits E(32554) CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 ( 137) 901 238.5 9.9e-64 CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 ( 138) 694 185.5 9.1e-48 CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 ( 197) 334 93.3 7.2e-20 CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 ( 132) 318 89.1 8.7e-19 CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 ( 133) 317 88.9 1e-18 CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 ( 132) 307 86.3 6.1e-18 CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 ( 134) 305 85.8 8.8e-18 CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 ( 135) 296 83.5 4.4e-17 CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 ( 166) 290 82.0 1.5e-16 CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 ( 134) 281 79.7 6.3e-16 CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 ( 132) 272 77.4 3.1e-15 CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8 ( 135) 269 76.6 5.3e-15 CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8 ( 140) 265 75.6 1.1e-14 CCDS46925.1 RBP1 gene_id:5947|Hs108|chr3 ( 153) 248 71.2 2.5e-13 CCDS46926.1 RBP1 gene_id:5947|Hs108|chr3 ( 157) 245 70.5 4.3e-13 CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4 ( 132) 233 67.4 3.1e-12 >>CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 (137 aa) initn: 901 init1: 901 opt: 901 Z-score: 1257.6 bits: 238.5 E(32554): 9.9e-64 Smith-Waterman score: 901; 99.3% identity (99.3% similar) in 137 aa overlap (1-137:1-137) 10 20 30 40 50 60 pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 TTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELANDELI ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: CCDS10 TTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELANDELI 70 80 90 100 110 120 130 pF1KE6 LTFGADDVVCTRIYVRE ::::::::::::::::: CCDS10 LTFGADDVVCTRIYVRE 130 >>CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 (138 aa) initn: 596 init1: 596 opt: 694 Z-score: 971.0 bits: 185.5 E(32554): 9.1e-48 Smith-Waterman score: 694; 76.1% identity (89.9% similar) in 138 aa overlap (1-137:1-138) 10 20 30 40 50 60 pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVR ::::.:.::. ::::.::::.::::.::::.:::::::: :::.:.:: :::::::::: CCDS11 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVR 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 TTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELAND-EL :::::::::: :::.::::: :.::. ::.:::. : : ::.:.:::: :: ::.:: :: CCDS11 TTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGEL 70 80 90 100 110 120 120 130 pF1KE6 ILTFGADDVVCTRIYVRE :::. ::::::::.:::: CCDS11 ILTMTADDVVCTRVYVRE 130 >>CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3 (197 aa) initn: 184 init1: 132 opt: 334 Z-score: 470.1 bits: 93.3 E(32554): 7.2e-20 Smith-Waterman score: 334; 40.9% identity (68.6% similar) in 137 aa overlap (1-134:63-193) 10 20 pF1KE6 MP-NFAGTWKMRSSENFDELLKALGVNAML :: .:.: ::: .:::.: :.:: ::. : CCDS31 HHPRSTGSRCPGSLQPSRPLVANWLQSLPEMPVDFTGYWKMLVNENFEEYLRALDVNVAL 40 50 60 70 80 90 30 40 50 60 70 80 pF1KE6 RKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEET--VDGRKCRSLAT ::.: :: :: ::::.. :.: .: :. ..:.::. :::. .: ::: . .. CCDS31 RKIA--NLLKPDKEIVQDGDHMIIRTLSTFRNYIMDFQVGKEFEEDLTGIDDRKCMTTVS 100 110 120 130 140 150 90 100 110 120 130 pF1KE6 WENENKIHCTQTLLEGDGPKTYWTSELANDELILTFGADDVVCTRIYVRE :... :..:.: .:. ::. . .::: : . .. ::: ... CCDS31 WDGD-KLQCVQ---KGEKEGRGWTQWIEGDELHLEMRVEGVVCKQVFKKVQ 160 170 180 190 >>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 (132 aa) initn: 341 init1: 173 opt: 318 Z-score: 450.8 bits: 89.1 E(32554): 8.7e-19 Smith-Waterman score: 318; 38.2% identity (71.8% similar) in 131 aa overlap (4-134:5-129) 10 20 30 40 50 pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV : .:::. .:.:::: .:::::. :.:. ..:: : : :.::. :.: .: CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVG--NVTKPTVIISQEGDKVVIRTLSTF 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELANDEL ..:::.:..:: :.: :.: :.:.:... .... .: . . :: .: .. :. . .. CCDS51 KNTEISFQLGEEFDETTADDRNCKSVVSLDGDKLVH----IQKWDGKETNFVREIKDGKM 60 70 80 90 100 110 120 130 pF1KE6 ILTFGADDVVCTRIYVRE ..:. ::: .: : CCDS51 VMTLTFGDVVAVRHYEKA 120 130 >>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 (133 aa) initn: 322 init1: 152 opt: 317 Z-score: 449.4 bits: 88.9 E(32554): 1e-18 Smith-Waterman score: 317; 41.0% identity (69.4% similar) in 134 aa overlap (4-137:5-132) 10 20 30 40 50 pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV : ::::. .:.:::. .:.:::. :.:: . .:: . :...:: . .:: .: CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVA--SMTKPTTIIEKNGDILTLKTHSTF 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELANDEL ..:::.::.: :.: :.: :: .:..: .. . .: : . :: .: . :: . .: CCDS34 KNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVH----LQKWDGQETTLVRELIDGKL 60 70 80 90 100 110 120 130 pF1KE6 ILTFGADDVVCTRIYVRE :::. .:::: : .: CCDS34 ILTLTHGTAVCTRTYEKEA 120 130 >>CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 (132 aa) initn: 310 init1: 150 opt: 307 Z-score: 435.6 bits: 86.3 E(32554): 6.1e-18 Smith-Waterman score: 307; 43.0% identity (67.4% similar) in 135 aa overlap (1-134:1-129) 10 20 30 40 50 pF1KE6 MPN-FAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV : : : ::::. ::::::. .:::::. ::.. : :: : : . :: . :.: .: CCDS62 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLA--KPTVIISKKGDIITIRTESTF 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELANDEL ..:::.::.:. ::: :.:.:: .:..: . ..... .: :: .: .:.: .. CCDS62 KNTEISFKLGQEFEETTADNRKTKSIVTLQ-RGSLNQVQRW---DGKETTIKRKLVNGKM 60 70 80 90 100 110 120 130 pF1KE6 ILTFGADDVVCTRIYVRE . ::::::: CCDS62 VAECKMKGVVCTRIYEKV 120 130 >>CCDS109.1 RBP7 gene_id:116362|Hs108|chr1 (134 aa) initn: 304 init1: 145 opt: 305 Z-score: 432.7 bits: 85.8 E(32554): 8.8e-18 Smith-Waterman score: 305; 36.7% identity (67.6% similar) in 139 aa overlap (1-136:1-133) 10 20 30 40 50 pF1KE6 MP-NFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV :: ...::: . ::.::. . :::.. ::. : ::. :.:.::.: :.:.... CCDS10 MPADLSGTWTLLSSDNFEGYMLALGIDFATRKI--AKLLKPQKVIEQNGDSFTIHTNSSL 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEGFEEET--VDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELAND :. ..::::: :.:.. .:.:::.::. :.:. .. : : .:. . :: . .: CCDS10 RNYFVKFKVGEEFDEDNRGLDNRKCKSLVIWDND-RLTCIQ---KGEKKNRGWTHWIEGD 60 70 80 90 100 110 120 130 pF1KE6 ELILTFGADDVVCTRIYVRE .: : . . :: . . : CCDS10 KLHLEMFCEGQVCKQTFQRA 120 130 >>CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12 (135 aa) initn: 172 init1: 160 opt: 296 Z-score: 420.2 bits: 83.5 E(32554): 4.4e-17 Smith-Waterman score: 296; 34.8% identity (71.1% similar) in 135 aa overlap (2-134:3-131) 10 20 30 40 50 pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV ::..: ... :..:... :.::... .::.:. :: ::...:... ..: .: CCDS85 MPPNLTGYYRFVSQKNMEDYLQALNISLAVRKIALLL--KPDKEIEHQGNHMTVRTLSTF 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEGFEEE--TVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELAND :. ..: :: :::. .::::::....:::.:. . :.: .:. :. : : .. CCDS85 RNYTVQFDVGVEFEEDLRSVDGRKCQTIVTWEEEHLV-CVQ---KGEVPNRGWRHWLEGE 60 70 80 90 100 110 120 130 pF1KE6 ELILTFGADDVVCTRIYVRE : : . : :.:: ... CCDS85 MLYLELTARDAVCEQVFRKVR 120 130 >>CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 (166 aa) initn: 275 init1: 173 opt: 290 Z-score: 410.4 bits: 82.0 E(32554): 1.5e-16 Smith-Waterman score: 290; 37.3% identity (72.9% similar) in 118 aa overlap (4-121:5-116) 10 20 30 40 50 pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV : .:::. .:.:::: .:::::. :.:. ..:: : : :.::. :.: .: CCDS83 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVG--NVTKPTVIISQEGDKVVIRTLSTF 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELANDEL ..:::.:..:: :.: :.: :.:.:... .... .: . . :: .: .. :. . .. CCDS83 KNTEISFQLGEEFDETTADDRNCKSVVSLDGDKLVH----IQKWDGKETNFVREIKDGKM 60 70 80 90 100 110 120 130 pF1KE6 ILTFGADDVVCTRIYVRE .. CCDS83 VMVSNDNSPFFLVFFSSPHTSHLLPSSSLLLPFFLLPSFFNNTSLARFFNYM 120 130 140 150 160 >>CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3 (134 aa) initn: 139 init1: 139 opt: 281 Z-score: 399.5 bits: 79.7 E(32554): 6.3e-16 Smith-Waterman score: 281; 35.8% identity (67.2% similar) in 134 aa overlap (6-137:7-134) 10 20 30 40 50 pF1KE6 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV :::.:.:.:::. .::: .. ::.:: .. .: : ::::.: ::..: CCDS31 MTRDQNGTWEMESNENFEGYMKALDIDFATRKIAVRL-TQTKV-IDQDGDNFKTKTTSTF 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 RTTEINFKVGEGFEEET--VDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTSELAND :. ...: :: :.: : .:.:. ..:.:::.. . :.: .:. . : . . .: CCDS31 RNYDVDFTVGVEFDEYTKSLDNRHVKALVTWEGDVLV-CVQ---KGEKENRGWKQWIEGD 60 70 80 90 100 110 120 130 pF1KE6 ELILTFGADDVVCTRIYVRE .: : . : :: ... .. CCDS31 KLYLELTCGDQVCRQVFKKK 120 130 137 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:53:26 2016 done: Tue Nov 8 09:53:26 2016 Total Scan time: 1.100 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]