FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6424, 553 aa 1>>>pF1KE6424 553 - 553 aa - 553 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.6630+/-0.000848; mu= 1.1093+/- 0.051 mean_var=237.4829+/-47.656, 0's: 0 Z-trim(115.9): 10 B-trim: 2 in 1/51 Lambda= 0.083226 statistics sampled from 16501 (16507) to 16501 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.804), E-opt: 0.2 (0.507), width: 16 Scan time: 3.430 The best scores are: opt bits E(32554) CCDS11796.1 ASPSCR1 gene_id:79058|Hs108|chr17 ( 553) 3737 461.3 1.4e-129 CCDS58611.1 ASPSCR1 gene_id:79058|Hs108|chr17 ( 647) 3081 382.6 8.1e-106 CCDS82222.1 ASPSCR1 gene_id:79058|Hs108|chr17 ( 501) 2435 304.9 1.5e-82 >>CCDS11796.1 ASPSCR1 gene_id:79058|Hs108|chr17 (553 aa) initn: 3737 init1: 3737 opt: 3737 Z-score: 2439.9 bits: 461.3 E(32554): 1.4e-129 Smith-Waterman score: 3737; 99.8% identity (99.8% similar) in 553 aa overlap (1-553:1-553) 10 20 30 40 50 60 pF1KE6 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 PFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 PFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE6 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHA 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE6 ISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLG 490 500 510 520 530 540 550 pF1KE6 KVPKWLKLPASKR ::::::::::::: CCDS11 KVPKWLKLPASKR 550 >>CCDS58611.1 ASPSCR1 gene_id:79058|Hs108|chr17 (647 aa) initn: 3057 init1: 3057 opt: 3081 Z-score: 2013.3 bits: 382.6 E(32554): 8.1e-106 Smith-Waterman score: 3109; 83.8% identity (83.8% similar) in 585 aa overlap (1-491:1-585) 10 20 30 40 50 60 pF1KE6 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 PFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 PFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV 370 380 390 400 410 420 430 440 450 pF1KE6 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQ----------------------------- ::::::::::::::::::::::::::::::: CCDS58 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQPQLGDRVAPFTLGPSLKRCLGPEQRTRLP 430 440 450 460 470 480 pF1KE6 ------------------------------------------------------------ CCDS58 VVGDGGDVDSGRLLFWGPSRGRASPSTGQPPCHPVCRPSSPPSPRPSSGDPSRVKAGHKH 490 500 510 520 530 540 460 470 480 490 500 pF1KE6 -----ANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPA :::::::::::::::::::::::::::::::::::::::: CCDS58 VGTGRANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPA 550 560 570 580 590 600 510 520 530 540 550 pF1KE6 PDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR CCDS58 PDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR 610 620 630 640 >>CCDS82222.1 ASPSCR1 gene_id:79058|Hs108|chr17 (501 aa) initn: 3316 init1: 2415 opt: 2435 Z-score: 1595.7 bits: 304.9 E(32554): 1.5e-82 Smith-Waterman score: 3150; 94.6% identity (94.6% similar) in 501 aa overlap (78-553:1-501) 50 60 70 80 90 100 pF1KE6 CEYDLKFQRSVLDLSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDS :::::::::::::::::::::::::::::: CCDS82 MVPASRSREGPENMVRIALQLDDGSRLQDS 10 20 30 110 120 130 140 150 160 pF1KE6 FCSGQTLWELLSHFPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 FCSGQTLWELLSHFPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSAT 40 50 60 70 80 90 170 180 190 200 210 220 pF1KE6 IRFVMKCYDPVGKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 IRFVMKCYDPVGKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEH 100 110 120 130 140 150 230 240 250 260 270 280 pF1KE6 TQEKQSTRAPAAAPFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKS :::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::: CCDS82 TQEKQSTRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKS 160 170 180 190 200 210 290 300 310 320 330 340 pF1KE6 GQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 GQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFEL 220 230 240 250 260 270 350 360 370 380 390 400 pF1KE6 TVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 TVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFF 280 290 300 310 320 330 410 420 430 440 pF1KE6 RPSETVGDLRDFVRSHLGNPELSFYL-------------------------FITPPKTVL :::::::::::::::::::::::::: :::::::: CCDS82 RPSETVGDLRDFVRSHLGNPELSFYLCLSSFGRMDGRGPRCFLTRRCLLSSVITPPKTVL 340 350 360 370 380 390 450 460 470 480 490 500 pF1KE6 DDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 DDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPS 400 410 420 430 440 450 510 520 530 540 550 pF1KE6 PLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 PLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR 460 470 480 490 500 553 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:09:26 2016 done: Tue Nov 8 13:09:27 2016 Total Scan time: 3.430 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]