FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1513, 181 aa 1>>>pF1KE1513 181 - 181 aa - 181 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3282+/-0.000689; mu= 12.0876+/- 0.041 mean_var=60.9555+/-12.267, 0's: 0 Z-trim(108.3): 24 B-trim: 0 in 0/51 Lambda= 0.164274 statistics sampled from 10147 (10155) to 10147 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.7), E-opt: 0.2 (0.312), width: 16 Scan time: 2.020 The best scores are: opt bits E(32554) CCDS72861.1 CD160 gene_id:11126|Hs108|chr1 ( 181) 1203 293.2 5.9e-80 >>CCDS72861.1 CD160 gene_id:11126|Hs108|chr1 (181 aa) initn: 1203 init1: 1203 opt: 1203 Z-score: 1549.0 bits: 293.2 E(32554): 5.9e-80 Smith-Waterman score: 1203; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181) 10 20 30 40 50 60 pF1KE1 MLLEPGRGCCALAILLAIVDIQSGGCINITSSASQEGTRLNLICTVWHKKEEAEGFVVFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 MLLEPGRGCCALAILLAIVDIQSGGCINITSSASQEGTRLNLICTVWHKKEEAEGFVVFL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 CKDRSGDCSPETSLKQLRLKRDPGIDGVGEISSQLMFTISQVTPLHSGTYQCCARSQKSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 CKDRSGDCSPETSLKQLRLKRDPGIDGVGEISSQLMFTISQVTPLHSGTYQCCARSQKSG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IRLQGHFFSILFTETGNYTVTGLKQRQHLEFSHNEGTLSSGFLQEKVWVMLVTSLVALQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS72 IRLQGHFFSILFTETGNYTVTGLKQRQHLEFSHNEGTLSSGFLQEKVWVMLVTSLVALQA 130 140 150 160 170 180 pF1KE1 L : CCDS72 L 181 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:57:33 2016 done: Sun Nov 6 22:57:33 2016 Total Scan time: 2.020 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]