Result of FASTA (ccds) for
pFN21AE2158
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE2158, 207 aa
1>>>pF1KE2158 207 - 207 aa - 207 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3092+/-0.000808; mu= 13.1408+/- 0.048
mean_var=59.7949+/-12.150, 0's: 0 Z-trim(107.0): 12 B-trim: 441 in 1/50
Lambda= 0.165860
statistics sampled from 9292 (9301) to 9292 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.67), E-opt: 0.2 (0.286), width: 16
Scan time: 2.060
The best scores are: opt bits E(32554)
CCDS53465.1 IL24 gene_id:11009|Hs108|chr1 ( 207) 1373 336.6 6.4e-93
CCDS1471.1 IL24 gene_id:11009|Hs108|chr1 ( 206) 1356 332.6 1.1e-91
CCDS53466.1 IL24 gene_id:11009|Hs108|chr1 ( 154) 705 176.8 6.4e-45
CCDS1470.1 IL20 gene_id:50604|Hs108|chr1 ( 176) 292 78.0 4.1e-15
CCDS1468.1 IL19 gene_id:29949|Hs108|chr1 ( 215) 247 67.2 8.4e-12
CCDS1469.1 IL19 gene_id:29949|Hs108|chr1 ( 177) 243 66.2 1.4e-11
>>CCDS53465.1 IL24 gene_id:11009|Hs108|chr1 (207 aa)
initn: 1373 init1: 1373 opt: 1373 Z-score: 1781.7 bits: 336.6 E(32554): 6.4e-93
Smith-Waterman score: 1373; 100.0% identity (100.0% similar) in 207 aa overlap (1-207:1-207)
10 20 30 40 50 60
pF1KE2 MNFQQRLQSLWTLASRPFCPPLLATASQMQMVVLPCLGFTLLLWSQVSGAQGQEFHFGPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MNFQQRLQSLWTLASRPFCPPLLATASQMQMVVLPCLGFTLLLWSQVSGAQGQEFHFGPC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 QVKGVVPQKLWEAFWAVKDTMQAQDNITSARLLQQEVLQNVSDAESCYLVHTLLEFYLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 QVKGVVPQKLWEAFWAVKDTMQAQDNITSARLLQQEVLQNVSDAESCYLVHTLLEFYLKT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE2 VFKNYHNRTVEVRTLKSFSTLANNFVLIVSQLQPSQENEMFSIRDSAHRRFLLFRRAFKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 VFKNYHNRTVEVRTLKSFSTLANNFVLIVSQLQPSQENEMFSIRDSAHRRFLLFRRAFKQ
130 140 150 160 170 180
190 200
pF1KE2 LDVEAALTKALGEVDILLTWMQKFYKL
:::::::::::::::::::::::::::
CCDS53 LDVEAALTKALGEVDILLTWMQKFYKL
190 200
>>CCDS1471.1 IL24 gene_id:11009|Hs108|chr1 (206 aa)
initn: 1274 init1: 1274 opt: 1356 Z-score: 1759.8 bits: 332.6 E(32554): 1.1e-91
Smith-Waterman score: 1356; 99.5% identity (99.5% similar) in 207 aa overlap (1-207:1-206)
10 20 30 40 50 60
pF1KE2 MNFQQRLQSLWTLASRPFCPPLLATASQMQMVVLPCLGFTLLLWSQVSGAQGQEFHFGPC
:::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MNFQQRLQSLWTLA-RPFCPPLLATASQMQMVVLPCLGFTLLLWSQVSGAQGQEFHFGPC
10 20 30 40 50
70 80 90 100 110 120
pF1KE2 QVKGVVPQKLWEAFWAVKDTMQAQDNITSARLLQQEVLQNVSDAESCYLVHTLLEFYLKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 QVKGVVPQKLWEAFWAVKDTMQAQDNITSARLLQQEVLQNVSDAESCYLVHTLLEFYLKT
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE2 VFKNYHNRTVEVRTLKSFSTLANNFVLIVSQLQPSQENEMFSIRDSAHRRFLLFRRAFKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VFKNYHNRTVEVRTLKSFSTLANNFVLIVSQLQPSQENEMFSIRDSAHRRFLLFRRAFKQ
120 130 140 150 160 170
190 200
pF1KE2 LDVEAALTKALGEVDILLTWMQKFYKL
:::::::::::::::::::::::::::
CCDS14 LDVEAALTKALGEVDILLTWMQKFYKL
180 190 200
>>CCDS53466.1 IL24 gene_id:11009|Hs108|chr1 (154 aa)
initn: 705 init1: 705 opt: 705 Z-score: 919.9 bits: 176.8 E(32554): 6.4e-45
Smith-Waterman score: 923; 74.4% identity (74.4% similar) in 207 aa overlap (1-207:1-154)
10 20 30 40 50 60
pF1KE2 MNFQQRLQSLWTLASRPFCPPLLATASQMQMVVLPCLGFTLLLWSQVSGAQGQEFHFGPC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 MNFQQRLQSLWTLASRPFCPPLLATASQMQMVVLPCLGFTLLLWSQVSGAQGQEFHFGPC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE2 QVKGVVPQKLWEAFWAVKDTMQAQDNITSARLLQQEVLQNVSDAESCYLVHTLLEFYLKT
::::::::::::::::::::::::::::::::::::::::::
CCDS53 QVKGVVPQKLWEAFWAVKDTMQAQDNITSARLLQQEVLQNVS------------------
70 80 90 100
130 140 150 160 170 180
pF1KE2 VFKNYHNRTVEVRTLKSFSTLANNFVLIVSQLQPSQENEMFSIRDSAHRRFLLFRRAFKQ
:::::::::::::::::::::::::
CCDS53 -----------------------------------QENEMFSIRDSAHRRFLLFRRAFKQ
110 120
190 200
pF1KE2 LDVEAALTKALGEVDILLTWMQKFYKL
:::::::::::::::::::::::::::
CCDS53 LDVEAALTKALGEVDILLTWMQKFYKL
130 140 150
>>CCDS1470.1 IL20 gene_id:50604|Hs108|chr1 (176 aa)
initn: 251 init1: 149 opt: 292 Z-score: 384.9 bits: 78.0 E(32554): 4.1e-15
Smith-Waterman score: 292; 33.1% identity (68.1% similar) in 163 aa overlap (42-203:17-174)
20 30 40 50 60 70
pF1KE2 TLASRPFCPPLLATASQMQMVVLPCLGFTLLLWSQVSGAQGQEFHFGPCQVKGVVPQKLW
:::. .: . ...: : . . :..
CCDS14 MKASSLAFSLLSAAFYLLWTPSTGLK--TLNLGSCVIATNL-QEIR
10 20 30 40
80 90 100 110 120 130
pF1KE2 EAFWAVKDTMQAQDNITSARLLQQ-EVLQNVSDAESCYLVHTLLEFYLKTVFKNYHNRTV
..: .. ..::.:. . :.:.. : ::... :. : :.. ::..:: ::::: .:
CCDS14 NGFSEIRGSVQAKDGNIDIRILRRTESLQDTKPANRCCLLRHLLRLYLDRVFKNY--QTP
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE2 EVRTLKSFSTLANNFVLIVSQLQPSQENEMFSIRDSAHRRFLLFRRAFKQLDVEAALTKA
. ::...:.:::.:. : ..:. . . . : ... . :..:. .::..::
CCDS14 DHYTLRKISSLANSFLTIKKDLRLCHAHMTCHCGEEAMKKYSQILSHFEKLEPQAAVVKA
110 120 130 140 150 160
200
pF1KE2 LGEVDILLTWMQKFYKL
:::.:::: ::..
CCDS14 LGELDILLQWMEETE
170
>>CCDS1468.1 IL19 gene_id:29949|Hs108|chr1 (215 aa)
initn: 216 init1: 127 opt: 247 Z-score: 325.3 bits: 67.2 E(32554): 8.4e-12
Smith-Waterman score: 247; 28.4% identity (65.8% similar) in 190 aa overlap (19-203:27-207)
10 20 30 40
pF1KE2 MNFQQRLQSLWTLASRPFCPPLL----ATASQMQMVVLPCLGFTLLLWSQVS
: :.: . ..: : : :: :.:. .:.
CCDS14 MCTEGAFPHRSACSLPLTHVHTHIHVCVPVLWGSVPRGMKLQCVSLWLLG-TILILCSVD
10 20 30 40 50
50 60 70 80 90 100
pF1KE2 GAQGQEFHFGPCQVKGVVPQKLWEAFWAVKDTMQAQDNITSARLLQQ-EVLQNVSDAESC
. .: . : .. . ... :.: .: ..::.:.. .. .:. :.:: .. . :
CCDS14 N-HGLR----RCLISTDM-HHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVC
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE2 YLVHTLLEFYLKTVFKNYHNRTVEVRTLKSFSTLANNFVLIVSQLQPSQENEMFSIRDSA
....:: ::. :::.... . .. :...:..::.:. . . :. ::... :. :
CCDS14 CVTKNLLAFYVDRVFKDHQEPNPKI--LRKISSIANSFLYMQKTLRQCQEQRQCHCRQEA
120 130 140 150 160 170
170 180 190 200
pF1KE2 HRRFLLFRRAFKQLDVEAALTKALGEVDILLTWMQKFYKL
... . ::.:.:: :.:::.:..:.:..:
CCDS14 TNATRVIHDNYDQLEVHAAAIKSLGELDVFLAWINKNHEVMFSA
180 190 200 210
>>CCDS1469.1 IL19 gene_id:29949|Hs108|chr1 (177 aa)
initn: 216 init1: 127 opt: 243 Z-score: 321.5 bits: 66.2 E(32554): 1.4e-11
Smith-Waterman score: 243; 28.8% identity (67.8% similar) in 177 aa overlap (28-203:2-169)
10 20 30 40 50 60
pF1KE2 MNFQQRLQSLWTLASRPFCPPLLATASQMQMVVLPCLGFTLLLWSQVSGAQGQEFHFGPC
..: : : :: :.:. .:.. .: . :
CCDS14 MKLQCVSLWLLG-TILILCSVDN-HGLRR----C
10 20
70 80 90 100 110
pF1KE2 QVKGVVPQKLWEAFWAVKDTMQAQDNITSARLLQQ-EVLQNVSDAESCYLVHTLLEFYLK
.. . ... :.: .: ..::.:.. .. .:. :.:: .. . : ....:: ::.
CCDS14 LISTDM-HHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVCCVTKNLLAFYVD
30 40 50 60 70 80
120 130 140 150 160 170
pF1KE2 TVFKNYHNRTVEVRTLKSFSTLANNFVLIVSQLQPSQENEMFSIRDSAHRRFLLFRRAFK
:::.... . .. :...:..::.:. . . :. ::... :. : ... .
CCDS14 RVFKDHQEPNPKI--LRKISSIANSFLYMQKTLRQCQEQRQCHCRQEATNATRVIHDNYD
90 100 110 120 130 140
180 190 200
pF1KE2 QLDVEAALTKALGEVDILLTWMQKFYKL
::.:.:: :.:::.:..:.:..:
CCDS14 QLEVHAAAIKSLGELDVFLAWINKNHEVMFSA
150 160 170
207 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 23:06:18 2016 done: Sun Nov 6 23:06:19 2016
Total Scan time: 2.060 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]