FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1436, 253 aa 1>>>pF1KE1436 253 - 253 aa - 253 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.0708+/-0.000981; mu= 5.8010+/- 0.060 mean_var=255.7788+/-52.251, 0's: 0 Z-trim(114.5): 136 B-trim: 133 in 1/52 Lambda= 0.080194 statistics sampled from 14916 (15056) to 14916 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.77), E-opt: 0.2 (0.462), width: 16 Scan time: 2.320 The best scores are: opt bits E(32554) CCDS228.1 C1QB gene_id:713|Hs108|chr1 ( 253) 1761 215.8 2.3e-56 CCDS227.1 C1QC gene_id:714|Hs108|chr1 ( 245) 816 106.5 1.8e-23 CCDS226.1 C1QA gene_id:712|Hs108|chr1 ( 245) 601 81.6 5.5e-16 CCDS8420.1 C1QTNF5 gene_id:114902|Hs108|chr11 ( 243) 474 66.9 1.5e-11 CCDS3284.1 ADIPOQ gene_id:9370|Hs108|chr3 ( 244) 469 66.3 2.2e-11 CCDS31793.1 C1QL4 gene_id:338761|Hs108|chr12 ( 238) 467 66.1 2.5e-11 >>CCDS228.1 C1QB gene_id:713|Hs108|chr1 (253 aa) initn: 1761 init1: 1761 opt: 1761 Z-score: 1125.6 bits: 215.8 E(32554): 2.3e-56 Smith-Waterman score: 1761; 100.0% identity (100.0% similar) in 253 aa overlap (1-253:1-253) 10 20 30 40 50 60 pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 EKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 EKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 KIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGNL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 CVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS22 CVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANS 190 200 210 220 230 240 250 pF1KE1 IFSGFLLFPDMEA ::::::::::::: CCDS22 IFSGFLLFPDMEA 250 >>CCDS227.1 C1QC gene_id:714|Hs108|chr1 (245 aa) initn: 593 init1: 593 opt: 816 Z-score: 534.8 bits: 106.5 E(32554): 1.8e-23 Smith-Waterman score: 816; 50.0% identity (74.0% similar) in 246 aa overlap (5-250:8-245) 10 20 30 40 50 pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPG .: .. .:.::::: : .::. .: : :::.::.::.:: :: : :: CCDS22 MDVGPSSLPHLGLKLLLLLLLLPL--RGQANTGCYG---IPGMPGLPGAPGKDGYDGLPG 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 IKGEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYK ::: :.:.. : .: :.::.::.::.::: :: :: : : :: : :: :: : :: CCDS22 PKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 ATQKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSR . .:..:: . : .. :::. :.:: ...:. .:::::::::::::.:::: CCDS22 QKFQSVFTVTRQTHQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFVYHASHT 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 GNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEG .:::: :.:. . :::::: .. .: ::..::..:.:. ::.:.: ..: ...:..: CCDS22 ANLCVLLYRS---GVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWLAVNDYYDMVGIQG 180 190 200 210 220 230 240 250 pF1KE1 ANSIFSGFLLFPDMEA ..:.::::::::: CCDS22 SDSVFSGFLLFPD 240 >>CCDS226.1 C1QA gene_id:712|Hs108|chr1 (245 aa) initn: 366 init1: 202 opt: 601 Z-score: 400.4 bits: 81.6 E(32554): 5.5e-16 Smith-Waterman score: 601; 41.3% identity (67.1% similar) in 252 aa overlap (3-249:1-243) 10 20 30 40 50 60 pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKG :. : : . .. .: ..: .. .: : .: : : : :: :.:: : .: CCDS22 MEGPRGWL--VLCVLAISLASMVTEDL-CRAPD---GKKGEAGRPGRRGRPGLKGEQG 10 20 30 40 50 70 80 90 100 110 pF1KE1 EKGLPGL-AGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKAT : : ::. .: .: :..:.:: ::::::: :: :: :. : :: : :: :. : CCDS22 EPGAPGIRTGIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGNIKDQ 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 QKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGN . :::: : : :. . .: :: ::::... :. .::.:.: ::: ::::... :. . CCDS22 PRPAFSAIRR-NPPMGGNVVI-FDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQVLSQWE 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 LCVNLMRG-RERAQKVVTFCDYAYN-TFQVTTGGMVLKLEQGENVFLQATDKNSLL--GM .:.... . : .... . ::: . . :::..:::::.:.::..:... :.. . : CCDS22 ICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVEKDPKKGHIYQGS 180 190 200 210 220 230 240 250 pF1KE1 EGANSIFSGFLLFPDMEA : :.:.:::::.:: CCDS22 E-ADSVFSGFLIFPSA 240 >>CCDS8420.1 C1QTNF5 gene_id:114902|Hs108|chr11 (243 aa) initn: 859 init1: 268 opt: 474 Z-score: 321.0 bits: 66.9 E(32554): 1.5e-11 Smith-Waterman score: 495; 37.2% identity (59.1% similar) in 242 aa overlap (13-250:4-235) 10 20 30 40 50 60 pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKG :..:::::: : . : :: ::.::::: :. : :: : CCDS84 MRPLLVLLLLGLAAGSPPLDDNKIPSLCPGHPGLPGTPGHHGSQGLPGRDG 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 EKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQ . : : : :: :: : ::.:: : ::.: :: : : : .:. .. CCDS84 RDGRDGAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAG---------PTGPAGECSVPP 60 70 80 90 100 130 140 150 160 170 pF1KE1 KIAFSATRTIN-VPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASS-RG . :::: :. . :: : . ::.:..: ...:. .:::::.:::.:::. ::. :. CCDS84 RSAFSAKRSESRVPPPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFAVHATVYRA 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 NLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQAT--DKNSLLGME .: .:... : . : .. .:: ...:: ..:..:. : .. . CCDS84 SLQFDLVKNGESIASFFQFFG-GWPKPASLSGGAMVRLEPEDQVWVQVGVGDYIGIYASI 170 180 190 200 210 220 240 250 pF1KE1 GANSIFSGFLLFPDMEA ..: :::::.. : CCDS84 KTDSTFSGFLVYSDWHSSPVFA 230 240 >>CCDS3284.1 ADIPOQ gene_id:9370|Hs108|chr3 (244 aa) initn: 366 init1: 232 opt: 469 Z-score: 317.9 bits: 66.3 E(32554): 2.2e-11 Smith-Waterman score: 480; 38.1% identity (64.6% similar) in 226 aa overlap (30-250:35-242) 10 20 30 40 50 pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPA-IPGIPGIPGTPGPDGQPGTPGI .::: : ::: :: :.:: ::. :::: CCDS32 GAVLLLLALPGHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAPGRDGRDGTPGE 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 KGEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKA ::::: ::: : .:..:: : :: : :.: :: : : :: : : CCDS32 KGEKGDPGLIGPKGDIGETGVPGAEG------------PRGFPGIQGRKGEPGE-GAYVY 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 TQKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSR- . .. . ...: .. ::: ... :..:.:. .::: :..::::::.:: . CCDS32 RSAFSVGLETYVTIP---NMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYM 120 130 140 150 160 180 190 200 210 220 230 pF1KE1 GNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQAT---DKNSLLG .. :.:.. ...:. . :. .: :. . ..:...:.:: :..:.::. ..:.: . CCDS32 KDVKVSLFK-KDKAM-LFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYA 170 180 190 200 210 220 240 250 pF1KE1 MEGANSIFSGFLLFPDMEA . .: :.::::. : CCDS32 DNDNDSTFTGFLLYHDTN 230 240 >>CCDS31793.1 C1QL4 gene_id:338761|Hs108|chr12 (238 aa) initn: 317 init1: 317 opt: 467 Z-score: 316.8 bits: 66.1 E(32554): 2.5e-11 Smith-Waterman score: 467; 36.3% identity (59.0% similar) in 251 aa overlap (12-250:2-238) 10 20 30 40 50 pF1KE1 MMMKIPWGSIPVLMLLLLLGLIDISQ---AQLSCTGPPAIPGIPGIPGTPGPDGQPGT-P ::.::. . :. :. :. : . : : ::::: :.. : CCDS31 MVLLLLVAIPLLVHSSRGPAHYEMLGRCRMVCDPHGPRGPGPDGAPASVP 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 GIKGEKGLPGLAGDHGEFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDY : : .:: :..: :. : :: ::.:: : : :: :: ::: : .: CCDS31 --------PFPPGAKGEVGRRGKAGLRGPPGPPGPRGPPGEPGRPGPPGPPGP-GPGGVA 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 KAT---QKIAFSATRTINVPLRRDQTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFTYH :. .::: : . : . ...::: :.::..: :: :::::: .::.:.:.:: CCDS31 PAAGYVPRIAFYA--GLRRPHEGYEVLRFDDVVTNVGNAYEAASGKFTCPMPGVYFFAYH 110 120 130 140 150 180 190 200 210 220 pF1KE1 ASSRG----NLCVNLMR-GRERAQKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATD . :: .. ..::. :. ::. .. : :. ......:.:. :..::.. CCDS31 VLMRGGDGTSMWADLMKNGQVRASAIAQDADQNYD---YASNSVILHLDVGDEVFIKLDG 160 170 180 190 200 210 230 240 250 pF1KE1 KNSLLGMEGANSIFSGFLLFPDMEA . : . : ::::...:: CCDS31 GKVHGGNTNKYSTFSGFIIYPD 220 230 253 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:08:46 2016 done: Sun Nov 6 23:08:46 2016 Total Scan time: 2.320 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]