FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5082, 683 aa 1>>>pF1KE5082 683 - 683 aa - 683 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.7516+/-0.000342; mu= 9.2035+/- 0.022 mean_var=150.2989+/-29.648, 0's: 0 Z-trim(119.2): 23 B-trim: 57 in 1/58 Lambda= 0.104616 statistics sampled from 33021 (33044) to 33021 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.718), E-opt: 0.2 (0.387), width: 16 Scan time: 8.990 The best scores are: opt bits E(85289) NP_004689 (OMIM: 601414,607301) U4/U6 small nuclea ( 683) 4447 683.2 8.7e-196 XP_011508431 (OMIM: 601414,607301) PREDICTED: U4/U ( 548) 3568 550.5 6.3e-156 XP_011508432 (OMIM: 601414,607301) PREDICTED: U4/U ( 539) 3515 542.5 1.6e-153 XP_016858279 (OMIM: 601414,607301) PREDICTED: U4/U ( 539) 3515 542.5 1.6e-153 XP_011508433 (OMIM: 601414,607301) PREDICTED: U4/U ( 431) 2782 431.8 2.7e-120 XP_011508434 (OMIM: 601414,607301) PREDICTED: U4/U ( 416) 2607 405.3 2.3e-112 XP_016858280 (OMIM: 601414,607301) PREDICTED: U4/U ( 362) 2233 348.9 2e-95 >>NP_004689 (OMIM: 601414,607301) U4/U6 small nuclear ri (683 aa) initn: 4447 init1: 4447 opt: 4447 Z-score: 3636.0 bits: 683.2 E(85289): 8.7e-196 Smith-Waterman score: 4447; 100.0% identity (100.0% similar) in 683 aa overlap (1-683:1-683) 10 20 30 40 50 60 pF1KE5 MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDISQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDISQG 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 VHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 VHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLH 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 RIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 RIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREH 610 620 630 640 650 660 670 680 pF1KE5 FKKHGAEHYWDLALSESVLESTD ::::::::::::::::::::::: NP_004 FKKHGAEHYWDLALSESVLESTD 670 680 >>XP_011508431 (OMIM: 601414,607301) PREDICTED: U4/U6 sm (548 aa) initn: 3568 init1: 3568 opt: 3568 Z-score: 2920.4 bits: 550.5 E(85289): 6.3e-156 Smith-Waterman score: 3568; 100.0% identity (100.0% similar) in 548 aa overlap (136-683:1-548) 110 120 130 140 150 160 pF1KE5 SGVKKRRIPRFEEVEEEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISP :::::::::::::::::::::::::::::: XP_011 MLTKLQIKQMMEAATRQIEERKKQLSFISP 10 20 30 170 180 190 200 210 220 pF1KE5 PTPQPKTPSSSQPERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PTPQPKTPSSSQPERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIG 40 50 60 70 80 90 230 240 250 260 270 280 pF1KE5 NANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 NANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANI 100 110 120 130 140 150 290 300 310 320 330 340 pF1KE5 RAVKREQFKQQLKEKPSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RAVKREQFKQQLKEKPSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTK 160 170 180 190 200 210 350 360 370 380 390 400 pF1KE5 AQLEKLQAEISQAARKTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AQLEKLQAEISQAARKTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEEN 220 230 240 250 260 270 410 420 430 440 450 460 pF1KE5 PKREDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PKREDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVR 280 290 300 310 320 330 470 480 490 500 510 520 pF1KE5 LGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQR 340 350 360 370 380 390 530 540 550 560 570 580 pF1KE5 KVKKIKKLKEDISQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KVKKIKKLKEDISQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVE 400 410 420 430 440 450 590 600 610 620 630 640 pF1KE5 GGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGE 460 470 480 490 500 510 650 660 670 680 pF1KE5 MKFKQCPTENMAREHFKKHGAEHYWDLALSESVLESTD :::::::::::::::::::::::::::::::::::::: XP_011 MKFKQCPTENMAREHFKKHGAEHYWDLALSESVLESTD 520 530 540 >>XP_011508432 (OMIM: 601414,607301) PREDICTED: U4/U6 sm (539 aa) initn: 3515 init1: 3515 opt: 3515 Z-score: 2877.2 bits: 542.5 E(85289): 1.6e-153 Smith-Waterman score: 3515; 100.0% identity (100.0% similar) in 539 aa overlap (145-683:1-539) 120 130 140 150 160 170 pF1KE5 RFEEVEEEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPS :::::::::::::::::::::::::::::: XP_011 MMEAATRQIEERKKQLSFISPPTPQPKTPS 10 20 30 180 190 200 210 220 230 pF1KE5 SSQPERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 SSQPERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLAN 40 50 60 70 80 90 240 250 260 270 280 290 pF1KE5 LHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFK 100 110 120 130 140 150 300 310 320 330 340 350 pF1KE5 QQLKEKPSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QQLKEKPSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAE 160 170 180 190 200 210 360 370 380 390 400 410 pF1KE5 ISQAARKTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ISQAARKTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGI 220 230 240 250 260 270 420 430 440 450 460 470 pF1KE5 TNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEP 280 290 300 310 320 330 480 490 500 510 520 530 pF1KE5 KVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLK 340 350 360 370 380 390 540 550 560 570 580 590 pF1KE5 EDISQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EDISQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKF 400 410 420 430 440 450 600 610 620 630 640 650 pF1KE5 KRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTE 460 470 480 490 500 510 660 670 680 pF1KE5 NMAREHFKKHGAEHYWDLALSESVLESTD ::::::::::::::::::::::::::::: XP_011 NMAREHFKKHGAEHYWDLALSESVLESTD 520 530 >>XP_016858279 (OMIM: 601414,607301) PREDICTED: U4/U6 sm (539 aa) initn: 3515 init1: 3515 opt: 3515 Z-score: 2877.2 bits: 542.5 E(85289): 1.6e-153 Smith-Waterman score: 3515; 100.0% identity (100.0% similar) in 539 aa overlap (145-683:1-539) 120 130 140 150 160 170 pF1KE5 RFEEVEEEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPS :::::::::::::::::::::::::::::: XP_016 MMEAATRQIEERKKQLSFISPPTPQPKTPS 10 20 30 180 190 200 210 220 230 pF1KE5 SSQPERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SSQPERLPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLAN 40 50 60 70 80 90 240 250 260 270 280 290 pF1KE5 LHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LHAMGIAPPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFK 100 110 120 130 140 150 300 310 320 330 340 350 pF1KE5 QQLKEKPSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QQLKEKPSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAE 160 170 180 190 200 210 360 370 380 390 400 410 pF1KE5 ISQAARKTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ISQAARKTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGI 220 230 240 250 260 270 420 430 440 450 460 470 pF1KE5 TNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEP 280 290 300 310 320 330 480 490 500 510 520 530 pF1KE5 KVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLK 340 350 360 370 380 390 540 550 560 570 580 590 pF1KE5 EDISQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EDISQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKF 400 410 420 430 440 450 600 610 620 630 640 650 pF1KE5 KRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTE 460 470 480 490 500 510 660 670 680 pF1KE5 NMAREHFKKHGAEHYWDLALSESVLESTD ::::::::::::::::::::::::::::: XP_016 NMAREHFKKHGAEHYWDLALSESVLESTD 520 530 >>XP_011508433 (OMIM: 601414,607301) PREDICTED: U4/U6 sm (431 aa) initn: 2782 init1: 2782 opt: 2782 Z-score: 2280.8 bits: 431.8 E(85289): 2.7e-120 Smith-Waterman score: 2782; 100.0% identity (100.0% similar) in 427 aa overlap (1-427:1-427) 10 20 30 40 50 60 pF1KE5 MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN ::::::: XP_011 PAQLNPPGIIE 430 >>XP_011508434 (OMIM: 601414,607301) PREDICTED: U4/U6 sm (416 aa) initn: 2607 init1: 2607 opt: 2607 Z-score: 2138.2 bits: 405.3 E(85289): 2.3e-112 Smith-Waterman score: 2607; 98.5% identity (99.3% similar) in 408 aa overlap (1-408:1-408) 10 20 30 40 50 60 pF1KE5 MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH ::::::::::::::::::::::::::::::::::::::::: . . .: XP_011 KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLGKSQERRLFWNHKSC 370 380 390 400 410 430 440 450 460 470 480 pF1KE5 PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN >>XP_016858280 (OMIM: 601414,607301) PREDICTED: U4/U6 sm (362 aa) initn: 2233 init1: 2233 opt: 2233 Z-score: 1834.1 bits: 348.9 E(85289): 2e-95 Smith-Waterman score: 2233; 100.0% identity (100.0% similar) in 345 aa overlap (1-345:1-345) 10 20 30 40 50 60 pF1KE5 MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR ::::::::::::::::::::::::::::::::::::::::::::: XP_016 PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKYRGKSQERRLFWNHK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH XP_016 SC 683 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 04:51:12 2016 done: Tue Nov 8 04:51:13 2016 Total Scan time: 8.990 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]