Result of FASTA (omim) for
pFN21AB7793
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB7793, 460 aa
1>>>pF1KB7793 460 - 460 aa - 460 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.3957+/-0.000354; mu= -0.1900+/- 0.022
mean_var=237.2509+/-49.005, 0's: 0 Z-trim(121.2): 15 B-trim: 34 in 1/54
Lambda= 0.083266
statistics sampled from 37445 (37460) to 37445 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.768), E-opt: 0.2 (0.439), width: 16
Scan time: 11.170
The best scores are: opt bits E(85289)
NP_003212 (OMIM: 169100,601601,617035) transcripti ( 460) 3127 388.5 2.1e-107
XP_011513139 (OMIM: 169100,601601,617035) PREDICTE ( 469) 2940 366.0 1.2e-100
XP_016866723 (OMIM: 169100,601601,617035) PREDICTE ( 503) 2940 366.0 1.3e-100
XP_016866722 (OMIM: 169100,601601,617035) PREDICTE ( 515) 2940 366.0 1.3e-100
NP_003211 (OMIM: 107580,113620) transcription fact ( 437) 2071 261.6 3.1e-69
XP_006715238 (OMIM: 107580,113620) PREDICTED: tran ( 482) 2006 253.8 7.5e-67
NP_001035890 (OMIM: 107580,113620) transcription f ( 433) 2004 253.5 8.1e-67
XP_016866721 (OMIM: 107580,113620) PREDICTED: tran ( 519) 2002 253.3 1.1e-66
NP_001027451 (OMIM: 107580,113620) transcription f ( 431) 2000 253.0 1.1e-66
XP_016866724 (OMIM: 169100,601601,617035) PREDICTE ( 307) 1835 233.1 8e-61
NP_848643 (OMIM: 614428) transcription factor AP-2 ( 442) 1737 221.5 3.7e-57
NP_003213 (OMIM: 601602) transcription factor AP-2 ( 450) 1653 211.4 4.1e-54
XP_011513135 (OMIM: 107580,113620) PREDICTED: tran ( 387) 1613 206.5 1e-52
XP_016856628 (OMIM: 614428) PREDICTED: transcripti ( 356) 1277 166.1 1.4e-40
NP_758438 (OMIM: 610161) transcription factor AP-2 ( 452) 1105 145.5 2.7e-34
>>NP_003212 (OMIM: 169100,601601,617035) transcription f (460 aa)
initn: 3127 init1: 3127 opt: 3127 Z-score: 2049.3 bits: 388.5 E(85289): 2.1e-107
Smith-Waterman score: 3127; 100.0% identity (100.0% similar) in 460 aa overlap (1-460:1-460)
10 20 30 40 50 60
pF1KB7 MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB7 PSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSEAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSEAGS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB7 LLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDVQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB7 SVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB7 SSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB7 KAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLAT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB7 KQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTALQNY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTALQNY
370 380 390 400 410 420
430 440 450 460
pF1KB7 LTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
::::::::::::::::::::::::::::::::::::::::
NP_003 LTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
430 440 450 460
>>XP_011513139 (OMIM: 169100,601601,617035) PREDICTED: t (469 aa)
initn: 3113 init1: 2940 opt: 2940 Z-score: 1927.7 bits: 366.0 E(85289): 1.2e-100
Smith-Waterman score: 3099; 98.1% identity (98.1% similar) in 469 aa overlap (1-460:1-469)
10 20 30 40 50
pF1KB7 MHSPPRDQAAIMLWKLVENVKYEDIYE---------DRHDGVPSHSSRLSQLGSVSQGPY
::::::::::::::::::::::::::: ::::::::::::::::::::::::
XP_011 MHSPPRDQAAIMLWKLVENVKYEDIYEMLVHTYSSMDRHDGVPSHSSRLSQLGSVSQGPY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB7 SSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSAPPLSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB7 QEVGSEAGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QEVGSEAGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB7 GHPGMEDVQSVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GHPGMEDVQSVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFC
190 200 210 220 230 240
240 250 260 270 280 290
pF1KB7 SVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKI
250 260 270 280 290 300
300 310 320 330 340 350
pF1KB7 GLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLH
310 320 330 340 350 360
360 370 380 390 400 410
pF1KB7 SRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAIC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAIC
370 380 390 400 410 420
420 430 440 450 460
pF1KB7 AALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
430 440 450 460
>>XP_016866723 (OMIM: 169100,601601,617035) PREDICTED: t (503 aa)
initn: 2940 init1: 2940 opt: 2940 Z-score: 1927.3 bits: 366.0 E(85289): 1.3e-100
Smith-Waterman score: 2940; 100.0% identity (100.0% similar) in 433 aa overlap (28-460:71-503)
10 20 30 40 50
pF1KB7 MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPL
::::::::::::::::::::::::::::::
XP_016 TKISMSTQGDQVLRIREVSLQMLVHTYSSMDRHDGVPSHSSRLSQLGSVSQGPYSSAPPL
50 60 70 80 90 100
60 70 80 90 100 110
pF1KB7 SHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSE
110 120 130 140 150 160
120 130 140 150 160 170
pF1KB7 AGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGME
170 180 190 200 210 220
180 190 200 210 220 230
pF1KB7 DVQSVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVQSVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRL
230 240 250 260 270 280
240 250 260 270 280 290
pF1KB7 SLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPA
290 300 310 320 330 340
300 310 320 330 340 350
pF1KB7 GRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNML
350 360 370 380 390 400
360 370 380 390 400 410
pF1KB7 LATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTAL
410 420 430 440 450 460
420 430 440 450 460
pF1KB7 QNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
:::::::::::::::::::::::::::::::::::::::::::
XP_016 QNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
470 480 490 500
>>XP_016866722 (OMIM: 169100,601601,617035) PREDICTED: t (515 aa)
initn: 2940 init1: 2940 opt: 2940 Z-score: 1927.2 bits: 366.0 E(85289): 1.3e-100
Smith-Waterman score: 2940; 100.0% identity (100.0% similar) in 433 aa overlap (28-460:83-515)
10 20 30 40 50
pF1KB7 MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPL
::::::::::::::::::::::::::::::
XP_016 TKISMSTQGDQVLRIREVSLQMLVHTYSSMDRHDGVPSHSSRLSQLGSVSQGPYSSAPPL
60 70 80 90 100 110
60 70 80 90 100 110
pF1KB7 SHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSE
120 130 140 150 160 170
120 130 140 150 160 170
pF1KB7 AGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGME
180 190 200 210 220 230
180 190 200 210 220 230
pF1KB7 DVQSVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVQSVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRL
240 250 260 270 280 290
240 250 260 270 280 290
pF1KB7 SLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPA
300 310 320 330 340 350
300 310 320 330 340 350
pF1KB7 GRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNML
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNML
360 370 380 390 400 410
360 370 380 390 400 410
pF1KB7 LATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTAL
420 430 440 450 460 470
420 430 440 450 460
pF1KB7 QNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
:::::::::::::::::::::::::::::::::::::::::::
XP_016 QNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
480 490 500 510
>>NP_003211 (OMIM: 107580,113620) transcription factor A (437 aa)
initn: 1967 init1: 1259 opt: 2071 Z-score: 1364.0 bits: 261.6 E(85289): 3.1e-69
Smith-Waterman score: 2088; 72.3% identity (86.9% similar) in 458 aa overlap (12-460:1-437)
10 20 30 40 50 60
pF1KB7 MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHT
:::::..:.:::: ::::::. . ..:: :::.:.:.::.::::::::
NP_003 MLWKLTDNIKYEDC-EDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHT
10 20 30 40
70 80 90 100 110
pF1KB7 PSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLH-QPQ-QHP-W-GQRQRQEVGS
:..:::::::::::::. : ::::::::::::::::::: ::: ::: : :::: :: :
NP_003 PNADFQPPYFPPPYQPI-YPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESG-
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB7 EAGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGM
:: :. ::::::::::: :: . :::. : .:..:.:: ::.:.: : ..
NP_003 ----LLHTHRGLPHQLSGLDPRRDY---RRHEDLLHGPH-ALSSGLGD-LSIHSLPH-AI
110 120 130 140 150
180 190 200 210 220 230
pF1KB7 EDVQSVEDANNSGMNLLDQSVIKKVPVP-PKS----VTSLMMNKDGFLGGMSVNTGEVFC
:.: ::: :.:. ::.:::: :: :: :... .:::...::. :: .::::
NP_003 EEVPHVEDP---GINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGV-VNPNEVFC
160 170 180 190 200 210
240 250 260 270 280 290
pF1KB7 SVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKI
:::::::::::::::::::.:::::::::::::::::::::::::::::::::::.:.::
NP_003 SVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKI
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB7 GLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLH
::::::::::::::::::::::::::::::::::.::::::::::.:.:::::.::..
NP_003 GLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQV
280 290 300 310 320 330
360 370 380 390 400 410
pF1KB7 SRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAIC
.::::::::::.::::::::::::.:.:::::.::::::::::::::.::.::::.::.:
NP_003 TRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVC
340 350 360 370 380 390
420 430 440 450 460
pF1KB7 AALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
::.::::::::::::.::::.:.:. : ::... .:..::::::::
NP_003 AAVTALQNYLTEALKAMDKMYLSNNP-NSHTDNN---AKSSDKEEKHRK
400 410 420 430
>>XP_006715238 (OMIM: 107580,113620) PREDICTED: transcri (482 aa)
initn: 1926 init1: 1259 opt: 2006 Z-score: 1321.2 bits: 253.8 E(85289): 7.5e-67
Smith-Waterman score: 2023; 72.5% identity (86.9% similar) in 443 aa overlap (27-460:60-482)
10 20 30 40 50
pF1KB7 MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPP
::::::. . ..:: :::.:.:.::.::::
XP_006 GSACRAESPTSARTRSQAAPTRYARPPLHPEDRHDGTSNGTARLPQLGTVGQSPYTSAPP
30 40 50 60 70 80
60 70 80 90 100 110
pF1KB7 LSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLH-QPQ-QHP-W-GQRQRQ
:::::..:::::::::::::. : ::::::::::::::::::: ::: ::: : :::: :
XP_006 LSHTPNADFQPPYFPPPYQPI-YPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQ
90 100 110 120 130 140
120 130 140 150 160 170
pF1KB7 EVGSEAGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLG
: : :: :. ::::::::::: :: . :::. : .:..:.:: ::.:.:
XP_006 ESG-----LLHTHRGLPHQLSGLDPRRDY---RRHEDLLHGPH-ALSSGLGD-LSIHSLP
150 160 170 180 190
180 190 200 210 220
pF1KB7 HPGMEDVQSVEDANNSGMNLLDQSVIKKVPVP-PKS----VTSLMMNKDGFLGGMSVNTG
: ..:.: ::: :.:. ::.:::: :: :: :... .:::...::. :: .
XP_006 H-AIEEVPHVEDP---GINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGV-VNPN
200 210 220 230 240 250
230 240 250 260 270 280
pF1KB7 EVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRER
:::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::.
XP_006 EVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREK
260 270 280 290 300 310
290 300 310 320 330 340
pF1KB7 LEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDP
:.::::::::::::::::::::::::::::::::::::.::::::::::.:.:::::.::
XP_006 LDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDP
320 330 340 350 360 370
350 360 370 380 390 400
pF1KB7 SDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGA
.. .::::::::::.::::::::::::.:.:::::.::::::::::::::.::.::::.
XP_006 NEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGS
380 390 400 410 420 430
410 420 430 440 450 460
pF1KB7 PAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
::.:::.::::::::::::.::::.:.:. : ::... .:..::::::::
XP_006 PAVCAAVTALQNYLTEALKAMDKMYLSNNP-NSHTDNN---AKSSDKEEKHRK
440 450 460 470 480
>>NP_001035890 (OMIM: 107580,113620) transcription facto (433 aa)
initn: 1924 init1: 1259 opt: 2004 Z-score: 1320.6 bits: 253.5 E(85289): 8.1e-67
Smith-Waterman score: 2021; 72.1% identity (86.9% similar) in 444 aa overlap (26-460:10-433)
10 20 30 40 50 60
pF1KB7 MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHT
..:::::. . ..:: :::.:.:.::.::::::::
NP_001 MSILAKMGDWQDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHT
10 20 30 40
70 80 90 100 110
pF1KB7 PSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLH-QPQ-QHP-W-GQRQRQEVGS
:..:::::::::::::. : ::::::::::::::::::: ::: ::: : :::: :: :
NP_001 PNADFQPPYFPPPYQPI-YPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESG-
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB7 EAGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGM
:: :. ::::::::::: :: . :::. : .:..:.:: ::.:.: : ..
NP_001 ----LLHTHRGLPHQLSGLDPRRDY---RRHEDLLHGPH-ALSSGLGD-LSIHSLPH-AI
110 120 130 140 150
180 190 200 210 220 230
pF1KB7 EDVQSVEDANNSGMNLLDQSVIKKVPVP-PKS----VTSLMMNKDGFLGGMSVNTGEVFC
:.: ::: :.:. ::.:::: :: :: :... .:::...::. :: .::::
NP_001 EEVPHVED---PGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGV-VNPNEVFC
160 170 180 190 200
240 250 260 270 280 290
pF1KB7 SVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKI
:::::::::::::::::::.:::::::::::::::::::::::::::::::::::.:.::
NP_001 SVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKI
210 220 230 240 250 260
300 310 320 330 340 350
pF1KB7 GLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLH
::::::::::::::::::::::::::::::::::.::::::::::.:.:::::.::..
NP_001 GLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQV
270 280 290 300 310 320
360 370 380 390 400 410
pF1KB7 SRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAIC
.::::::::::.::::::::::::.:.:::::.::::::::::::::.::.::::.::.:
NP_001 TRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVC
330 340 350 360 370 380
420 430 440 450 460
pF1KB7 AALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
::.::::::::::::.::::.:.:. : ::... .:..::::::::
NP_001 AAVTALQNYLTEALKAMDKMYLSNNP-NSHTDNN---AKSSDKEEKHRK
390 400 410 420 430
>>XP_016866721 (OMIM: 107580,113620) PREDICTED: transcri (519 aa)
initn: 1922 init1: 1259 opt: 2002 Z-score: 1318.2 bits: 253.3 E(85289): 1.1e-66
Smith-Waterman score: 2019; 72.2% identity (86.9% similar) in 443 aa overlap (27-460:97-519)
10 20 30 40 50
pF1KB7 MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPP
.:::::. . ..:: :::.:.:.::.::::
XP_016 ALCGAGTAAGGVNSWASAHASAGSNPALYDQDRHDGTSNGTARLPQLGTVGQSPYTSAPP
70 80 90 100 110 120
60 70 80 90 100 110
pF1KB7 LSHTPSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLH-QPQ-QHP-W-GQRQRQ
:::::..:::::::::::::. : ::::::::::::::::::: ::: ::: : :::: :
XP_016 LSHTPNADFQPPYFPPPYQPI-YPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQ
130 140 150 160 170 180
120 130 140 150 160 170
pF1KB7 EVGSEAGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLG
: : :: :. ::::::::::: :: . :::. : .:..:.:: ::.:.:
XP_016 ESG-----LLHTHRGLPHQLSGLDPRRDY---RRHEDLLHGPH-ALSSGLGD-LSIHSLP
190 200 210 220 230
180 190 200 210 220
pF1KB7 HPGMEDVQSVEDANNSGMNLLDQSVIKKVPVP-PKS----VTSLMMNKDGFLGGMSVNTG
: ..:.: ::: :.:. ::.:::: :: :: :... .:::...::. :: .
XP_016 H-AIEEVPHVEDP---GINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGV-VNPN
240 250 260 270 280 290
230 240 250 260 270 280
pF1KB7 EVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRER
:::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::.
XP_016 EVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREK
300 310 320 330 340 350
290 300 310 320 330 340
pF1KB7 LEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDP
:.::::::::::::::::::::::::::::::::::::.::::::::::.:.:::::.::
XP_016 LDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDP
360 370 380 390 400 410
350 360 370 380 390 400
pF1KB7 SDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGA
.. .::::::::::.::::::::::::.:.:::::.::::::::::::::.::.::::.
XP_016 NEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGS
420 430 440 450 460 470
410 420 430 440 450 460
pF1KB7 PAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
::.:::.::::::::::::.::::.:.:. : ::... .:..::::::::
XP_016 PAVCAAVTALQNYLTEALKAMDKMYLSNNP-NSHTDNN---AKSSDKEEKHRK
480 490 500 510
>>NP_001027451 (OMIM: 107580,113620) transcription facto (431 aa)
initn: 1920 init1: 1259 opt: 2000 Z-score: 1318.0 bits: 253.0 E(85289): 1.1e-66
Smith-Waterman score: 2017; 72.4% identity (86.9% similar) in 442 aa overlap (28-460:10-431)
10 20 30 40 50 60
pF1KB7 MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHT
:::::. . ..:: :::.:.:.::.::::::::
NP_001 MLVHSFSAMDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHT
10 20 30 40
70 80 90 100 110
pF1KB7 PSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLH-QPQ-QHP-W-GQRQRQEVGS
:..:::::::::::::. : ::::::::::::::::::: ::: ::: : :::: :: :
NP_001 PNADFQPPYFPPPYQPI-YPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESG-
50 60 70 80 90 100
120 130 140 150 160 170
pF1KB7 EAGSLLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGM
:: :. ::::::::::: :: . :::. : .:..:.:: ::.:.: : ..
NP_001 ----LLHTHRGLPHQLSGLDPRRDY---RRHEDLLHGPH-ALSSGLGD-LSIHSLPH-AI
110 120 130 140 150
180 190 200 210 220 230
pF1KB7 EDVQSVEDANNSGMNLLDQSVIKKVPVP-PKS----VTSLMMNKDGFLGGMSVNTGEVFC
:.: ::: :.:. ::.:::: :: :: :... .:::...::. :: .::::
NP_001 EEVPHVEDP---GINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGV-VNPNEVFC
160 170 180 190 200
240 250 260 270 280 290
pF1KB7 SVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKI
:::::::::::::::::::.:::::::::::::::::::::::::::::::::::.:.::
NP_001 SVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKI
210 220 230 240 250 260
300 310 320 330 340 350
pF1KB7 GLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLH
::::::::::::::::::::::::::::::::::.::::::::::.:.:::::.::..
NP_001 GLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQV
270 280 290 300 310 320
360 370 380 390 400 410
pF1KB7 SRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAIC
.::::::::::.::::::::::::.:.:::::.::::::::::::::.::.::::.::.:
NP_001 TRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVC
330 340 350 360 370 380
420 430 440 450 460
pF1KB7 AALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
::.::::::::::::.::::.:.:. : ::... .:..::::::::
NP_001 AAVTALQNYLTEALKAMDKMYLSNNP-NSHTDNN---AKSSDKEEKHRK
390 400 410 420 430
>>XP_016866724 (OMIM: 169100,601601,617035) PREDICTED: t (307 aa)
initn: 1829 init1: 1829 opt: 1835 Z-score: 1212.9 bits: 233.1 E(85289): 8e-61
Smith-Waterman score: 1835; 98.9% identity (99.6% similar) in 285 aa overlap (177-460:23-307)
150 160 170 180 190 200
pF1KB7 PDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDV-QSVEDANNSGMNLLDQSVIKKVPVPP
::. .:::::::::::::::::::::::::
XP_016 MHSPPRDQAAIMLWKLVENVKYEDIYESVEDANNSGMNLLDQSVIKKVPVPP
10 20 30 40 50
210 220 230 240 250 260
pF1KB7 KSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNA
60 70 80 90 100 110
270 280 290 300 310 320
pF1KB7 SLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGY
120 130 140 150 160 170
330 340 350 360 370 380
pF1KB7 ICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSP
180 190 200 210 220 230
390 400 410 420 430 440
pF1KB7 ILEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILEPGIQSCLTHFSLITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGE
240 250 260 270 280 290
450 460
pF1KB7 GPGSKTGDKEEKHRK
:::::::::::::::
XP_016 GPGSKTGDKEEKHRK
300
460 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 18:32:11 2016 done: Sat Nov 5 18:32:12 2016
Total Scan time: 11.170 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]