FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1359, 410 aa 1>>>pF1KE1359 410 - 410 aa - 410 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3811+/-0.000713; mu= 17.0186+/- 0.043 mean_var=69.8468+/-13.700, 0's: 0 Z-trim(108.4): 36 B-trim: 9 in 1/53 Lambda= 0.153462 statistics sampled from 10146 (10182) to 10146 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.692), E-opt: 0.2 (0.313), width: 16 Scan time: 2.990 The best scores are: opt bits E(32554) CCDS12419.1 CCNE1 gene_id:898|Hs108|chr19 ( 410) 2788 626.2 1.7e-179 CCDS6264.1 CCNE2 gene_id:9134|Hs108|chr8 ( 404) 1231 281.5 1e-75 CCDS45031.1 CCNA1 gene_id:8900|Hs108|chr13 ( 421) 343 84.9 1.6e-16 CCDS45030.1 CCNA1 gene_id:8900|Hs108|chr13 ( 464) 343 84.9 1.7e-16 CCDS9357.1 CCNA1 gene_id:8900|Hs108|chr13 ( 465) 343 84.9 1.7e-16 CCDS3723.1 CCNA2 gene_id:890|Hs108|chr4 ( 432) 332 82.5 8.7e-16 CCDS8191.1 CCND1 gene_id:595|Hs108|chr11 ( 295) 306 76.6 3.4e-14 CCDS10170.1 CCNB2 gene_id:9133|Hs108|chr15 ( 398) 304 76.2 6e-14 CCDS3997.1 CCNB1 gene_id:891|Hs108|chr5 ( 433) 300 75.4 1.2e-13 CCDS4863.1 CCND3 gene_id:896|Hs108|chr6 ( 292) 285 71.9 8.6e-13 CCDS8524.1 CCND2 gene_id:894|Hs108|chr12 ( 289) 271 68.8 7.3e-12 CCDS14331.1 CCNB3 gene_id:85417|Hs108|chrX (1395) 276 70.3 1.2e-11 >>CCDS12419.1 CCNE1 gene_id:898|Hs108|chr19 (410 aa) initn: 2788 init1: 2788 opt: 2788 Z-score: 3335.9 bits: 626.2 E(32554): 1.7e-179 Smith-Waterman score: 2788; 100.0% identity (100.0% similar) in 410 aa overlap (1-410:1-410) 10 20 30 40 50 60 pF1KE1 MPRERRERDAKERDTMKEDGGAEFSARSRKRKANVTVFLQDPDEEMAKIDRTARDQCGSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MPRERRERDAKERDTMKEDGGAEFSARSRKRKANVTVFLQDPDEEMAKIDRTARDQCGSQ 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PWDNNAVCADPCSLIPTPDKEDDDRVYPNSTCKPRIIAPSRGSPLPVLSWANREEVWKIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 PWDNNAVCADPCSLIPTPDKEDDDRVYPNSTCKPRIIAPSRGSPLPVLSWANREEVWKIM 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LNKEKTYLRDQHFLEQHPLLQPKMRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 LNKEKTYLRDQHFLEQHPLLQPKMRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 ENVVKTLLQLIGISSLFIAAKLEEIYPPKLHQFAYVTDGACSGDEILTMELMIMKALKWR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 ENVVKTLLQLIGISSLFIAAKLEEIYPPKLHQFAYVTDGACSGDEILTMELMIMKALKWR 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LSPLTIVSWLNVYMQVAYLNDLHEVLLPQYPQQIFIQIAELLDLCVLDVDCLEFPYGILA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 LSPLTIVSWLNVYMQVAYLNDLHEVLLPQYPQQIFIQIAELLDLCVLDVDCLEFPYGILA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 ASALYHFSSSELMQKVSGYQWCDIENCVKWMVPFAMVIRETGSSKLKHFRGVADEDAHNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 ASALYHFSSSELMQKVSGYQWCDIENCVKWMVPFAMVIRETGSSKLKHFRGVADEDAHNI 310 320 330 340 350 360 370 380 390 400 410 pF1KE1 QTHRDSLDLLDKARAKKAMLSEQNRASPLPSGLLTPPQSGKKQSSGPEMA :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 QTHRDSLDLLDKARAKKAMLSEQNRASPLPSGLLTPPQSGKKQSSGPEMA 370 380 390 400 410 >>CCDS6264.1 CCNE2 gene_id:9134|Hs108|chr8 (404 aa) initn: 1220 init1: 1198 opt: 1231 Z-score: 1473.0 bits: 281.5 E(32554): 1e-75 Smith-Waterman score: 1231; 51.6% identity (75.0% similar) in 380 aa overlap (27-402:29-399) 10 20 30 40 50 pF1KE1 MPRERRERDAKERDTMKEDGGAEFSARSRKRKANVTVFLQDPDEEMAKIDRTARDQCG ...:::.. : . ::..: . .: CCDS62 MSRRSSRLQAKQQPQPSQTESPQEAQIIQAKKRKTTQDV--KKRREEVTKKHQYEIRNCW 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 SQPWDNNAVCADPCSLIPTPDKE---DDDRVYPNSTCKPRIIAPSRGSPLPVLSWANREE : .... .:: .: :: :: .: . : : .: : :::: :::. .: CCDS62 P-PVLSGGI--SPCIIIETPHKEIGTSDFSRFTNYRFKNLFINP---SPLPDLSWGCSKE 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 VWKIMLNKEKTYLRDQHFLEQHPLLQPKMRAILLDWLMEVCEVYKLHRETFYLAQDFFDR :: ::.::. :..:.:: : :.:.::.::::::.:::::: ::::::::::::::: CCDS62 VWLNMLKKESRYVHDKHFEVLHSDLEPQMRSILLDWLLEVCEVYTLHRETFYLAQDFFDR 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 YMATQENVVKTLLQLIGISSLFIAAKLEEIYPPKLHQFAYVTDGACSGDEILTMELMIMK .: ::... :..::::::.:::::.:::::: :::..:::::::::: ..:: :::.:.: CCDS62 FMLTQKDINKNMLQLIGITSLFIASKLEEIYAPKLQEFAYVTDGACSEEDILRMELIILK 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 ALKWRLSPLTIVSWLNVYMQVAYLNDLHEVLLPQYPQQIFIQIAELLDLCVLDVDCLEFP ::::.: :.::.::::...:: :.: .:::::: :. :::::.:::::.: .: ::: CCDS62 ALKWELCPVTIISWLNLFLQVDALKDAPKVLLPQYSQETFIQIAQLLDLCILAIDSLEFQ 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE1 YGILAASALYHFSSSELMQKVSGYQWCDIENCVKWMVPFAMVIRETGSSKLKHFRGVADE : ::.:.:: ::.: :...:.:: .: .: .:: :::::. :.. :. ::: :. . : CCDS62 YRILTAAALCHFTSIEVVKKASGLEWDSISECVDWMVPFVNVVKSTSPVKLKTFKKIPME 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE1 DAHNIQTHRDSLDLLDKARAKKAMLSEQNRASPL-PSGLLTPPQSGKKQSSGPEMA : :::::: . : .:... .. . . .. ::. .:..:::.: .: CCDS62 DRHNIQTHTNYLAMLEEVNYINT-FRKGGQLSPVCNGGIMTPPKSTEKPPGKH 360 370 380 390 400 >>CCDS45031.1 CCNA1 gene_id:8900|Hs108|chr13 (421 aa) initn: 293 init1: 164 opt: 343 Z-score: 410.2 bits: 84.9 E(32554): 1.6e-16 Smith-Waterman score: 346; 31.4% identity (64.1% similar) in 223 aa overlap (114-328:169-379) 90 100 110 120 130 140 pF1KE1 DRVYPNSTCKPRIIAPSRGSPLPVLSWANREEVWKIMLNKEKTYLRDQHFLEQHPLLQPK ::... . . : . :.....: . CCDS45 SPMLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQYLREAEIRHRPKAHYMKKQPDITEG 140 150 160 170 180 190 150 160 170 180 190 200 pF1KE1 MRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQENVVKTLLQLIGISSLFIAAKLE ::.::.:::.:: : :::. ::.::: .:.::... . .:.. :::.: .....:.: : CCDS45 MRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCM-SVLRGKLQLVGTAAMLLASKYE 200 210 220 230 240 250 210 220 230 240 250 260 pF1KE1 EIYPPKLHQFAYVTDGACSGDEILTMELMIMKALKWRLSPLTIVSWLNVYMQVAYLNDLH :::::.. .:.:.:: . . ..: :: ...:.: . :. : ..: :.. . CCDS45 EIYPPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVCVRT 260 270 280 290 300 310 270 280 290 300 310 pF1KE1 EVLLPQYPQQIFIQIAELLDLCVLDVD-CLEFPYGILAASA--LYHFSSS-----ELMQK : : .: .::: .:..: :.. ...::.: : ... . : . CCDS45 ENL-AKY-------VAEL---SLLEADPFLKYLPSLIAAAAFCLANYTVNKHFWPETLAA 320 330 340 350 360 320 330 340 350 360 370 pF1KE1 VSGYQWCDIENCVKWMVPFAMVIRETGSSKLKHFRGVADEDAHNIQTHRDSLDLLDKARA .::. .: :. CCDS45 FTGYSLSEIVPCLSELHKAYLDIPHRPQQAIREKYKASKYLCVSLMEPPAVLLLQ 370 380 390 400 410 420 >>CCDS45030.1 CCNA1 gene_id:8900|Hs108|chr13 (464 aa) initn: 293 init1: 164 opt: 343 Z-score: 409.6 bits: 84.9 E(32554): 1.7e-16 Smith-Waterman score: 346; 31.4% identity (64.1% similar) in 223 aa overlap (114-328:212-422) 90 100 110 120 130 140 pF1KE1 DRVYPNSTCKPRIIAPSRGSPLPVLSWANREEVWKIMLNKEKTYLRDQHFLEQHPLLQPK ::... . . : . :.....: . CCDS45 SPMLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQYLREAEIRHRPKAHYMKKQPDITEG 190 200 210 220 230 240 150 160 170 180 190 200 pF1KE1 MRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQENVVKTLLQLIGISSLFIAAKLE ::.::.:::.:: : :::. ::.::: .:.::... . .:.. :::.: .....:.: : CCDS45 MRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCM-SVLRGKLQLVGTAAMLLASKYE 250 260 270 280 290 300 210 220 230 240 250 260 pF1KE1 EIYPPKLHQFAYVTDGACSGDEILTMELMIMKALKWRLSPLTIVSWLNVYMQVAYLNDLH :::::.. .:.:.:: . . ..: :: ...:.: . :. : ..: :.. . CCDS45 EIYPPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVCVRT 310 320 330 340 350 360 270 280 290 300 310 pF1KE1 EVLLPQYPQQIFIQIAELLDLCVLDVD-CLEFPYGILAASA--LYHFSSS-----ELMQK : : .: .::: .:..: :.. ...::.: : ... . : . CCDS45 ENL-AKY-------VAEL---SLLEADPFLKYLPSLIAAAAFCLANYTVNKHFWPETLAA 370 380 390 400 320 330 340 350 360 370 pF1KE1 VSGYQWCDIENCVKWMVPFAMVIRETGSSKLKHFRGVADEDAHNIQTHRDSLDLLDKARA .::. .: :. CCDS45 FTGYSLSEIVPCLSELHKAYLDIPHRPQQAIREKYKASKYLCVSLMEPPAVLLLQ 410 420 430 440 450 460 >>CCDS9357.1 CCNA1 gene_id:8900|Hs108|chr13 (465 aa) initn: 293 init1: 164 opt: 343 Z-score: 409.6 bits: 84.9 E(32554): 1.7e-16 Smith-Waterman score: 346; 31.4% identity (64.1% similar) in 223 aa overlap (114-328:213-423) 90 100 110 120 130 140 pF1KE1 DRVYPNSTCKPRIIAPSRGSPLPVLSWANREEVWKIMLNKEKTYLRDQHFLEQHPLLQPK ::... . . : . :.....: . CCDS93 SPMLVDSSLLSQSEDISSLGTDVINVTEYAEEIYQYLREAEIRHRPKAHYMKKQPDITEG 190 200 210 220 230 240 150 160 170 180 190 200 pF1KE1 MRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQENVVKTLLQLIGISSLFIAAKLE ::.::.:::.:: : :::. ::.::: .:.::... . .:.. :::.: .....:.: : CCDS93 MRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCM-SVLRGKLQLVGTAAMLLASKYE 250 260 270 280 290 300 210 220 230 240 250 260 pF1KE1 EIYPPKLHQFAYVTDGACSGDEILTMELMIMKALKWRLSPLTIVSWLNVYMQVAYLNDLH :::::.. .:.:.:: . . ..: :: ...:.: . :. : ..: :.. . CCDS93 EIYPPEVDEFVYITDDTYTKRQLLKMEHLLLKVLAFDLTVPTTNQFLLQYLRRQGVCVRT 310 320 330 340 350 360 270 280 290 300 310 pF1KE1 EVLLPQYPQQIFIQIAELLDLCVLDVD-CLEFPYGILAASA--LYHFSSS-----ELMQK : : .: .::: .:..: :.. ...::.: : ... . : . CCDS93 ENL-AKY-------VAEL---SLLEADPFLKYLPSLIAAAAFCLANYTVNKHFWPETLAA 370 380 390 400 410 320 330 340 350 360 370 pF1KE1 VSGYQWCDIENCVKWMVPFAMVIRETGSSKLKHFRGVADEDAHNIQTHRDSLDLLDKARA .::. .: :. CCDS93 FTGYSLSEIVPCLSELHKAYLDIPHRPQQAIREKYKASKYLCVSLMEPPAVLLLQ 420 430 440 450 460 >>CCDS3723.1 CCNA2 gene_id:890|Hs108|chr4 (432 aa) initn: 296 init1: 169 opt: 332 Z-score: 396.9 bits: 82.5 E(32554): 8.7e-16 Smith-Waterman score: 351; 32.4% identity (69.1% similar) in 207 aa overlap (126-321:184-372) 100 110 120 130 140 pF1KE1 IIAPSRGSPLPVLSWANREEVWKIMLNKEKTYLRDQH--------FLEQHPLLQPKMRAI ::::... .....: . .:::: CCDS37 SPHTMDMSIILEDEKPVSVNEVPDYHEDIHTYLREMEVKCKPKVGYMKKQPDITNSMRAI 160 170 180 190 200 210 150 160 170 180 190 200 pF1KE1 LLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQENVVKTLLQLIGISSLFIAAKLEEIYP :.:::.:: : :::. ::..:: ...::..... .:.. :::.: .....:.:.::::: CCDS37 LVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSM-SVLRGKLQLVGTAAMLLASKFEEIYP 220 230 240 250 260 270 210 220 230 240 250 260 pF1KE1 PKLHQFAYVTDGACSGDEILTMELMIMKALKWRLSPLTIVSWLNVYMQVAYLNDLHEVLL :.. .:.:.:: . . ..: :: ...:.: . :. :. ..:. :. :: CCDS37 PEVAEFVYITDDTYTKKQVLRMEHLVLKVLTFDLAAPTVNQFLTQYF-------LH---- 280 290 300 310 320 270 280 290 300 310 320 pF1KE1 PQYPQQIFIQ-IAELL-DLCVLDVD-CLEFPYGILAASALYHFSSSELMQKVSGYQWCDI : : . .. .: .: .: ..:.: :.. ...:..: .:.. . :.: .: CCDS37 -QQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAGAA-FHLA----LYTVTGQSWPES 330 340 350 360 370 330 340 350 360 370 380 pF1KE1 ENCVKWMVPFAMVIRETGSSKLKHFRGVADEDAHNIQTHRDSLDLLDKARAKKAMLSEQN CCDS37 LIRKTGYTLESLKPCLMDLHQTYLKAPQHAQQSIREKYKNSKYHGVSLLNPPETLNL 380 390 400 410 420 430 >>CCDS8191.1 CCND1 gene_id:595|Hs108|chr11 (295 aa) initn: 286 init1: 149 opt: 306 Z-score: 368.2 bits: 76.6 E(32554): 3.4e-14 Smith-Waterman score: 306; 30.4% identity (66.0% similar) in 194 aa overlap (114-304:25-208) 90 100 110 120 130 140 pF1KE1 DRVYPNSTCKPRIIAPSRGSPLPVLSWANREEVWKIMLNKEKTYLRDQHFLE--QHPLLQ ..: . ::. :.: . ... :. .: CCDS81 MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQKEVL- 10 20 30 40 50 150 160 170 180 190 200 pF1KE1 PKMRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQENVVKTLLQLIGISSLFIAAK :.:: :. :..:::: : ..:.: ::....::.. . : : :. :::.: . .:.:.: CCDS81 PSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFL-SLEPVKKSRLQLLGATCMFVASK 60 70 80 90 100 110 210 220 230 240 250 260 pF1KE1 LEEIYPPKLHQFAYVTDGACSGDEILTMELMIMKALKWRLSPLTIVSWLNVYMQVAYLND ..: : ... ::.. .:.: :::.... ::: :. .: .... .:. CCDS81 MKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIE-----HFLSK 120 130 140 150 160 270 280 290 300 310 320 pF1KE1 LHEVLLPQYPQQIFIQIAE-LLDLCVLDVDCLEFPYGILAASALYHFSSSELMQKVSGYQ . :. . .::. . :. .. ::. :: . : ...::... CCDS81 MPEA---EENKQIIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFL 170 180 190 200 210 220 330 340 350 360 370 380 pF1KE1 WCDIENCVKWMVPFAMVIRETGSSKLKHFRGVADEDAHNIQTHRDSLDLLDKARAKKAML CCDS81 SYYRLTRFLSRVIKCDPDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDLA 230 240 250 260 270 280 >>CCDS10170.1 CCNB2 gene_id:9133|Hs108|chr15 (398 aa) initn: 275 init1: 170 opt: 304 Z-score: 363.9 bits: 76.2 E(32554): 6e-14 Smith-Waterman score: 322; 27.2% identity (60.0% similar) in 320 aa overlap (13-321:31-325) 10 20 30 pF1KE1 MPRERRERDAKERDTMKEDGGAEFSARSR---KRKANVTVFL : :. :. : . ..:. :. :. : . CCDS10 MALLRRPTVSSDLENIDTGVNSKVKSHVTIRRTVLEEIGNRVTTRAAQVAKKAQNTKVPV 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE1 QDPDEEMAKIDRTARDQCGSQPWDNNAVCADPCSLIPTPD----KEDDD-RVYPNST-CK : : . ..... . . .: . . . : . :::. ::.. ... .. :: CCDS10 Q-PTKT-TNVNKQLKPTASVKPVQMEKLA--PKGPSPTPEDVSMKEENLCQAFSDALLCK 70 80 90 100 110 100 110 120 130 140 150 pF1KE1 PRIIAPSRGSPLPVLSWANREEVWKIMLNKEKTYLRDQHFLEQHPLLQPKMRAILLDWLM . : .. : : ..... . . : . :::. . . . .:::::.:::. CCDS10 IEDI-DNEDWENPQLCSDYVKDIYQYLRQLEVLQSINPHFLDGRDI-NGRMRAILVDWLV 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE1 EVCEVYKLHRETFYLAQDFFDRYMATQENVVKTLLQLIGISSLFIAAKLEEIYPPKLHQF .: ..: .::.:. ..::.. .: : . :::.::..:..:.: ::.. :....: CCDS10 QVHSKFRLLQETLYMCVGIMDRFLQVQP-VSRKKLQLVGITALLLASKYEEMFSPNIEDF 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE1 AYVTDGACSGDEILTMELMIMKALKWRLS-PLTIVSWLNVYMQVAYLNDLHEVLLPQYPQ .:.::.: ....: :: .:.: ::..:. :: . .: ... . :... : .: CCDS10 VYITDNAYTSSQIREMETLILKELKFELGRPLPL-HFLRRASKAGEV-DVEQHTLAKY-- 240 250 260 270 280 280 290 300 310 320 330 pF1KE1 QIFIQIAELLDLCVLDVDCLEFPYGILAASALYHFSSSELMQKVSGY-QWCDIENCVKWM :..: ..: : ... . .::.: : : ::: : .: CCDS10 --------LMELTLIDYDMVHYHPSKVAAAA------SCLSQKVLGQGKWNLKQQYYTGY 290 300 310 320 330 340 350 360 370 380 390 pF1KE1 VPFAMVIRETGSSKLKHFRGVADEDAHNIQTHRDSLDLLDKARAKKAMLSEQNRASPLPS CCDS10 TENEVLEVMQHMAKNVVKVNENLTKFIAIKNKYASSKLLKISMIPQLNSKAVKDLASPLI 340 350 360 370 380 390 >>CCDS3997.1 CCNB1 gene_id:891|Hs108|chr5 (433 aa) initn: 323 init1: 188 opt: 300 Z-score: 358.6 bits: 75.4 E(32554): 1.2e-13 Smith-Waterman score: 332; 34.8% identity (70.1% similar) in 184 aa overlap (123-304:182-349) 100 110 120 130 140 150 pF1KE1 KPRIIAPSRGSPLPVLSWANREEVWKIMLNKEKTYLRDQHFLEQHPLLQPKMRAILLDWL .:. .: ...: .. . .:::::.::: CCDS39 AVNDVDAEDGADPNLCSEYVKDIYAYLRQLEEEQAVRPKYLLGRE--VTGNMRAILIDWL 160 170 180 190 200 160 170 180 190 200 210 pF1KE1 MEVCEVYKLHRETFYLAQDFFDRYMATQENVV-KTLLQLIGISSLFIAAKLEEIYPPKLH ..: ..: .::.:.. ...::.: :.: : : .:::.:....:::.: ::.:::.. CCDS39 VQVQMKFRLLQETMYMTVSIIDRFM--QNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIG 210 220 230 240 250 260 220 230 240 250 260 270 pF1KE1 QFAYVTDGACSGDEILTMELMIMKALKWRLS-PLTIVSWLNVYMQVAYLNDLHEVLLPQY .::.:::.. . .: ::. :..::.. :. :: . .: ... . :... : .: CCDS39 DFAFVTDNTYTKHQIRQMEMKILRALNFGLGRPLPL-HFLRRASKIGEV-DVEQHTLAKY 270 280 290 300 310 320 280 290 300 310 320 330 pF1KE1 PQQIFIQIAELLDLCVLDVDCLEFPYGILAASALYHFSSSELMQKVSGYQWCDIENCVKW :..: .:: : ..:: . .::.:. CCDS39 ----------LMELTMLDYDMVHFPPSQIAAGAFCLALKILDNGEWTPTLQHYLSYTEES 330 340 350 360 370 340 350 360 370 380 390 pF1KE1 MVPFAMVIRETGSSKLKHFRGVADEDAHNIQTHRDSLDLLDKARAKKAMLSEQNRASPLP CCDS39 LLPVMQHLAKNVVMVNQGLTKHMTVKNKYATSKHAKISTLPQLNSALVQDLAKAVAKV 380 390 400 410 420 430 >>CCDS4863.1 CCND3 gene_id:896|Hs108|chr6 (292 aa) initn: 219 init1: 118 opt: 285 Z-score: 343.2 bits: 71.9 E(32554): 8.6e-13 Smith-Waterman score: 297; 29.3% identity (60.5% similar) in 215 aa overlap (92-304:6-208) 70 80 90 100 110 120 pF1KE1 WDNNAVCADPCSLIPTPDKEDDDRVYPNSTCKPRIIAPSRGSPLPVLSWANREEVWKIML :. :: :..: : : .: : . .: CCDS48 MELLCCEGTRHAP-RAGPDPRLLGDQR--VLQSLL 10 20 30 130 140 150 160 170 180 pF1KE1 NKEKTYL-RDQHFLEQHPLLQPKMRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQ :. :. : ..: . ..:.:: .: :..:::: . ..:.: ::....:::.. CCDS48 RLEERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCV 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE1 ENVVKTLLQLIGISSLFIAAKLEEIYPPKLHQFAYVTDGACSGDEILTMELMIMKALKWR . :. :::.: ...:.::.: : .... :: : : .. :.... ::: CCDS48 PTR-KAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWD 100 110 120 130 140 150 250 260 270 280 290 pF1KE1 LSPLTIVSWLNVYMQVAYLNDLHEVLLPQYPQQIFIQIAE-LLDLCVLDVDCLEFPYGIL :. . ..: :.. ::.. ::. : . . :. .: ::. : .: ... CCDS48 LAAVIAHDFL------AFI--LHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMI 160 170 180 190 200 300 310 320 330 340 350 pF1KE1 AASALYHFSSSELMQKVSGYQWCDIENCVKWMVPFAMVIRETGSSKLKHFRGVADEDAHN :.... CCDS48 ATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSS 210 220 230 240 250 260 410 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:51:55 2016 done: Sun Nov 6 23:51:55 2016 Total Scan time: 2.990 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]