FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2215, 452 aa 1>>>pF1KE2215 452 - 452 aa - 452 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.9364+/-0.00111; mu= 10.4070+/- 0.066 mean_var=121.5493+/-23.795, 0's: 0 Z-trim(106.7): 24 B-trim: 15 in 1/49 Lambda= 0.116332 statistics sampled from 9135 (9151) to 9135 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.651), E-opt: 0.2 (0.281), width: 16 Scan time: 3.070 The best scores are: opt bits E(32554) CCDS12192.1 TIMM44 gene_id:10469|Hs108|chr19 ( 452) 2956 507.5 1.1e-143 >>CCDS12192.1 TIMM44 gene_id:10469|Hs108|chr19 (452 aa) initn: 2956 init1: 2956 opt: 2956 Z-score: 2693.2 bits: 507.5 E(32554): 1.1e-143 Smith-Waterman score: 2956; 100.0% identity (100.0% similar) in 452 aa overlap (1-452:1-452) 10 20 30 40 50 60 pF1KE2 MAAAALRSGWCRCPRRCLGSGIQFLSSHNLPHGSTYQMRRPGGELPLSKSYSSGNRKGFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MAAAALRSGWCRCPRRCLGSGIQFLSSHNLPHGSTYQMRRPGGELPLSKSYSSGNRKGFL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 SGLLDNVKQELAKNKEMKESIKKFRDEARRLEESDVLQEARRKYKTIESETVRTSEVLRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 SGLLDNVKQELAKNKEMKESIKKFRDEARRLEESDVLQEARRKYKTIESETVRTSEVLRK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 KLGELTGTVKESLHEVSKSDLGRKIKEGVEEAAKTAKQSAESVSKGGEKLGRTAAFRALS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 KLGELTGTVKESLHEVSKSDLGRKIKEGVEEAAKTAKQSAESVSKGGEKLGRTAAFRALS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 QGVESVKKEIDDSVLGQTGPYRRPQRLRKRTEFAGDKFKEEKVFEPNEEALGVVLHKDSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 QGVESVKKEIDDSVLGQTGPYRRPQRLRKRTEFAGDKFKEEKVFEPNEEALGVVLHKDSK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 WYQQWKDFKENNVVFNRFFEMKMKYDESDNAFIRASRALTDKVTDLLGGLFSKTEMSEVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 WYQQWKDFKENNVVFNRFFEMKMKYDESDNAFIRASRALTDKVTDLLGGLFSKTEMSEVL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 TEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 TEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 LGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEGDPDKVLRML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 LGLQFHSRILDIDNVDLAMGKMMEQGPVLIITFQAQLVMVVRNPKGEVVEGDPDKVLRML 370 380 390 400 410 420 430 440 450 pF1KE2 YVWALCRDQDELNPYAAWRLLDISASSTEQIL :::::::::::::::::::::::::::::::: CCDS12 YVWALCRDQDELNPYAAWRLLDISASSTEQIL 430 440 450 452 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:59:42 2016 done: Sun Nov 6 23:59:42 2016 Total Scan time: 3.070 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]