FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4480, 497 aa 1>>>pF1KE4480 497 - 497 aa - 497 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9562+/-0.000358; mu= 19.9589+/- 0.022 mean_var=64.9095+/-12.714, 0's: 0 Z-trim(113.5): 151 B-trim: 0 in 0/52 Lambda= 0.159192 statistics sampled from 22673 (22832) to 22673 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.643), E-opt: 0.2 (0.268), width: 16 Scan time: 9.090 The best scores are: opt bits E(85289) NP_001159532 (OMIM: 138492,614619) glycine recepto ( 497) 3313 769.9 0 NP_000815 (OMIM: 138492,614619) glycine receptor s ( 497) 3313 769.9 0 XP_016863523 (OMIM: 138492,614619) PREDICTED: glyc ( 399) 2690 626.7 3.7e-179 XP_016863524 (OMIM: 138492,614619) PREDICTED: glyc ( 303) 2030 475.1 1.3e-133 NP_001159533 (OMIM: 138492,614619) glycine recepto ( 303) 2030 475.1 1.3e-133 NP_001112358 (OMIM: 305990) glycine receptor subun ( 452) 1221 289.4 1.5e-77 XP_016884916 (OMIM: 305990) PREDICTED: glycine rec ( 452) 1221 289.4 1.5e-77 XP_011543798 (OMIM: 305990) PREDICTED: glycine rec ( 436) 1220 289.1 1.7e-77 XP_011543797 (OMIM: 305990) PREDICTED: glycine rec ( 436) 1220 289.1 1.7e-77 XP_006724550 (OMIM: 305990) PREDICTED: glycine rec ( 436) 1220 289.1 1.7e-77 NP_001112357 (OMIM: 305990) glycine receptor subun ( 452) 1220 289.2 1.7e-77 NP_002054 (OMIM: 305990) glycine receptor subunit ( 452) 1220 289.2 1.7e-77 NP_006520 (OMIM: 600421) glycine receptor subunit ( 464) 1218 288.7 2.4e-77 NP_001036008 (OMIM: 600421) glycine receptor subun ( 449) 1216 288.2 3.2e-77 XP_016864119 (OMIM: 600421) PREDICTED: glycine rec ( 424) 1213 287.5 5e-77 NP_000162 (OMIM: 138491,149400) glycine receptor s ( 449) 1170 277.7 4.9e-74 XP_016864838 (OMIM: 138491,149400) PREDICTED: glyc ( 465) 1170 277.7 5e-74 NP_001139512 (OMIM: 138491,149400) glycine recepto ( 457) 1163 276.1 1.5e-73 XP_011530569 (OMIM: 600421) PREDICTED: glycine rec ( 313) 1084 257.8 3.3e-68 XP_016884917 (OMIM: 305990) PREDICTED: glycine rec ( 363) 1040 247.8 4e-65 XP_016884918 (OMIM: 305990) PREDICTED: glycine rec ( 363) 1040 247.8 4e-65 NP_001165413 (OMIM: 305990) glycine receptor subun ( 363) 1040 247.8 4e-65 NP_001278929 (OMIM: 138491,149400) glycine recepto ( 366) 991 236.5 9.9e-62 NP_000803 (OMIM: 137190,617153) gamma-aminobutyric ( 474) 957 228.8 2.7e-59 NP_000805 (OMIM: 137192,612269,617113) gamma-amino ( 473) 916 219.4 1.9e-56 NP_068712 (OMIM: 137192,612269,617113) gamma-amino ( 473) 914 218.9 2.6e-56 NP_000804 (OMIM: 600232) gamma-aminobutyric acid r ( 474) 894 214.3 6.2e-55 NP_068711 (OMIM: 600232) gamma-aminobutyric acid r ( 512) 822 197.8 6.2e-50 NP_002033 (OMIM: 137161) gamma-aminobutyric acid r ( 479) 820 197.3 8.1e-50 XP_011519730 (OMIM: 137192,612269,617113) PREDICTE ( 414) 817 196.6 1.2e-49 NP_001243632 (OMIM: 137161) gamma-aminobutyric aci ( 462) 816 196.4 1.5e-49 NP_001178250 (OMIM: 137192,612269,617113) gamma-am ( 402) 808 194.5 4.8e-49 NP_001254511 (OMIM: 137161) gamma-aminobutyric aci ( 392) 794 191.3 4.4e-48 XP_016866178 (OMIM: 137161) PREDICTED: gamma-amino ( 392) 794 191.3 4.4e-48 NP_001243633 (OMIM: 137161) gamma-aminobutyric aci ( 392) 794 191.3 4.4e-48 NP_002034 (OMIM: 137162) gamma-aminobutyric acid r ( 465) 792 190.9 6.9e-48 NP_001178249 (OMIM: 137192,612269,617113) gamma-am ( 388) 788 189.9 1.1e-47 NP_001265560 (OMIM: 137192,612269,617113) gamma-am ( 388) 788 189.9 1.1e-47 XP_011529486 (OMIM: 300349) PREDICTED: gamma-amino ( 406) 778 187.6 5.7e-47 NP_061028 (OMIM: 300349) gamma-aminobutyric acid r ( 632) 776 187.3 1.1e-46 XP_011534015 (OMIM: 137162) PREDICTED: gamma-amino ( 421) 759 183.3 1.2e-45 NP_055026 (OMIM: 602729) gamma-aminobutyric acid r ( 440) 737 178.2 4.2e-44 NP_000806 (OMIM: 137163,613060) gamma-aminobutyric ( 452) 728 176.2 1.8e-43 XP_011539496 (OMIM: 137163,613060) PREDICTED: gamm ( 465) 728 176.2 1.8e-43 NP_000807 (OMIM: 137164,607681,611277) gamma-amino ( 467) 728 176.2 1.8e-43 NP_944494 (OMIM: 137164,607681,611277) gamma-amino ( 475) 728 176.2 1.9e-43 NP_001317619 (OMIM: 103780,137140) gamma-aminobuty ( 511) 728 176.2 2e-43 XP_011511977 (OMIM: 103780,137140) PREDICTED: gamm ( 511) 728 176.2 2e-43 XP_016856425 (OMIM: 137163,613060) PREDICTED: gamm ( 687) 728 176.3 2.5e-43 NP_000798 (OMIM: 103780,137140) gamma-aminobutyric ( 451) 725 175.5 2.9e-43 >>NP_001159532 (OMIM: 138492,614619) glycine receptor su (497 aa) initn: 3313 init1: 3313 opt: 3313 Z-score: 4109.4 bits: 769.9 E(85289): 0 Smith-Waterman score: 3313; 100.0% identity (100.0% similar) in 497 aa overlap (1-497:1-497) 10 20 30 40 50 60 pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 EAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSNDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSNDF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 SIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARAL 430 440 450 460 470 480 490 pF1KE4 FPFCFLFFNVIYWSIYL ::::::::::::::::: NP_001 FPFCFLFFNVIYWSIYL 490 >>NP_000815 (OMIM: 138492,614619) glycine receptor subun (497 aa) initn: 3313 init1: 3313 opt: 3313 Z-score: 4109.4 bits: 769.9 E(85289): 0 Smith-Waterman score: 3313; 100.0% identity (100.0% similar) in 497 aa overlap (1-497:1-497) 10 20 30 40 50 60 pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 LGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 EAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSNDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 EAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSNDF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 SIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 SIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARAL 430 440 450 460 470 480 490 pF1KE4 FPFCFLFFNVIYWSIYL ::::::::::::::::: NP_000 FPFCFLFFNVIYWSIYL 490 >>XP_016863523 (OMIM: 138492,614619) PREDICTED: glycine (399 aa) initn: 2690 init1: 2690 opt: 2690 Z-score: 3337.5 bits: 626.7 E(85289): 3.7e-179 Smith-Waterman score: 2690; 100.0% identity (100.0% similar) in 399 aa overlap (99-497:1-399) 70 80 90 100 110 120 pF1KE4 PRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPSDFRGSDAL :::::::::::::::::::::::::::::: XP_016 MDYRVNIFLRQKWNDPRLKLPSDFRGSDAL 10 20 30 130 140 150 160 170 180 pF1KE4 TVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSITLSCPLDLT 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE4 LFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEYGNCTKYYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEYGNCTKYYK 100 110 120 130 140 150 250 260 270 280 290 300 pF1KE4 GTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGIFSVLS 160 170 180 190 200 210 310 320 330 340 350 360 pF1KE4 LASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRVEAEKARIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRVEAEKARIA 220 230 240 250 260 270 370 380 390 400 410 420 pF1KE4 KAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSNDFSIVGSLPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSNDFSIVGSLPR 280 290 300 310 320 330 430 440 450 460 470 480 pF1KE4 DFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARALFPFCFLFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARALFPFCFLFF 340 350 360 370 380 390 490 pF1KE4 NVIYWSIYL ::::::::: XP_016 NVIYWSIYL >>XP_016863524 (OMIM: 138492,614619) PREDICTED: glycine (303 aa) initn: 2030 init1: 2030 opt: 2030 Z-score: 2520.0 bits: 475.1 E(85289): 1.3e-133 Smith-Waterman score: 2030; 100.0% identity (100.0% similar) in 302 aa overlap (1-302:1-302) 10 20 30 40 50 60 pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRV :: XP_016 LGW >>NP_001159533 (OMIM: 138492,614619) glycine receptor su (303 aa) initn: 2030 init1: 2030 opt: 2030 Z-score: 2520.0 bits: 475.1 E(85289): 1.3e-133 Smith-Waterman score: 2030; 100.0% identity (100.0% similar) in 302 aa overlap (1-302:1-302) 10 20 30 40 50 60 pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQLEKIALPQFDIKKEDIEY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKRV :: NP_001 LGW >>NP_001112358 (OMIM: 305990) glycine receptor subunit a (452 aa) initn: 1262 init1: 479 opt: 1221 Z-score: 1513.4 bits: 289.4 E(85289): 1.5e-77 Smith-Waterman score: 1267; 45.7% identity (66.1% similar) in 495 aa overlap (4-496:8-441) 10 20 30 40 50 pF1KE4 MKFLLTTAF-LILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANS .::. : ..: . . :. :...:..:: ::: . :.. NP_001 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQ-------PSQTLS------PSDF 10 20 30 40 60 70 80 90 100 110 pF1KE4 TSNILNRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPR .....: .:: :::::::: ::.:. :::::::::: ::::::::::::::.::: : NP_001 LDKLMGRT-SGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE4 LKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSM : :.. .:.: .::.: .:::::::::::.::::::: .: :: : ..: :: :. NP_001 LAY-SEY-PDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE4 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK ::..:::::.:: ::::.: : ::::::::: .:: : : : :::. : ..:::: : NP_001 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF-IL 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE4 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA ::. : : :::.:. :: .::.:: : :.::.:.:.. .: :.::::.:::.::::: :: NP_001 KEEKELGYCTKHYN-TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDA 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE4 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVML . ::: ::: .::..... . : :::::::::.:.:. .:::: ::.:.:::.: NP_001 APARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAV---- 290 300 310 320 330 360 370 380 390 400 410 pF1KE4 NNPKRVEAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSD : .: . : :. . .. ..: .:.... : .: : .: .: NP_001 NFVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSG---------YGMGHCLQV------ 340 350 360 370 380 420 430 440 450 460 470 pF1KE4 LRSNDFSIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRID .: . : . : . :. . : : . ::::: NP_001 ---KDGTAVKATPAN-----------PLP----------QPPKDGDAIKKKFVDRAKRID 390 400 410 480 490 pF1KE4 LYARALFPFCFLFFNVIYWSIYL .:: ::. ::.::..:: : NP_001 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK 420 430 440 450 >>XP_016884916 (OMIM: 305990) PREDICTED: glycine recepto (452 aa) initn: 1262 init1: 479 opt: 1221 Z-score: 1513.4 bits: 289.4 E(85289): 1.5e-77 Smith-Waterman score: 1267; 45.7% identity (66.1% similar) in 495 aa overlap (4-496:8-441) 10 20 30 40 50 pF1KE4 MKFLLTTAF-LILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANS .::. : ..: . . :. :...:..:: ::: . :.. XP_016 MNRQLVNILTALFAFFLETNHFRTAFCKDHDSRSGKQ-------PSQTLS------PSDF 10 20 30 40 60 70 80 90 100 110 pF1KE4 TSNILNRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPR .....: .:: :::::::: ::.:. :::::::::: ::::::::::::::.::: : XP_016 LDKLMGRT-SGYDARIRPNFKGPPVNVTCNIFINSFGSIAETTMDYRVNIFLRQQWNDSR 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE4 LKLPSDFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSM : :.. .:.: .::.: .:::::::::::.::::::: .: :: : ..: :: :. XP_016 LAY-SEY-PDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSI 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE4 RLSITLSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIK ::..:::::.:: ::::.: : ::::::::: .:: : : : :::. : ..:::: : XP_016 RLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF-IL 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE4 KEDIEYGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDA ::. : : :::.:. :: .::.:: : :.::.:.:.. .: :.::::.:::.::::: :: XP_016 KEEKELGYCTKHYN-TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDA 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE4 SAARVPLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVML . ::: ::: .::..... . : :::::::::.:.:. .:::: ::.:.:::.: XP_016 APARVALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAV---- 290 300 310 320 330 360 370 380 390 400 410 pF1KE4 NNPKRVEAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSD : .: . : :. . .. ..: .:.... : .: : .: .: XP_016 NFVSRQHKEFLRLRRRQKRQNKEEDVTRESRFNFSG---------YGMGHCLQV------ 340 350 360 370 380 420 430 440 450 460 470 pF1KE4 LRSNDFSIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRID .: . : . : . :. . : : . ::::: XP_016 ---KDGTAVKATPAN-----------PLP----------QPPKDGDAIKKKFVDRAKRID 390 400 410 480 490 pF1KE4 LYARALFPFCFLFFNVIYWSIYL .:: ::. ::.::..:: : XP_016 TISRAAFPLAFLIFNIFYWITYKIIRHEDVHKK 420 430 440 450 >>XP_011543798 (OMIM: 305990) PREDICTED: glycine recepto (436 aa) initn: 1261 init1: 479 opt: 1220 Z-score: 1512.4 bits: 289.1 E(85289): 1.7e-77 Smith-Waterman score: 1265; 46.0% identity (66.5% similar) in 478 aa overlap (20-496:9-425) 10 20 30 40 50 60 pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL :. :...:..:: ::: . :.. .... XP_011 MNLHMRMTAFCKDHDSRSGKQ-------PSQTLS------PSDFLDKLM 10 20 30 70 80 90 100 110 120 pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS .: .:: :::::::: ::.:. :::::::::. ::::::::::::::.::: :: : XP_011 GRT-SGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAY-S 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT .. .:.: .::.: .:::::::::::.::::::: .: :: : ..: :: :.::..: XP_011 EY-PDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLT 100 110 120 130 140 150 190 200 210 220 230 pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIKKEDIE ::::.:: ::::.: : ::::::::: .:: : : : :::. : ..:::: : ::. : XP_011 LSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF-ILKEEKE 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE4 YGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARV : :::.:. :: .::.:: : :.::.:.:.. .: :.::::.:::.::::: ::. ::: XP_011 LGYCTKHYN-TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV 220 230 240 250 260 270 300 310 320 330 340 350 pF1KE4 PLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKR ::: .::..... . : :::::::::.:.:. .:::: ::.:.:::.:. . .: XP_011 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFV----SR 280 290 300 310 320 360 370 380 390 400 410 pF1KE4 VEAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSND . : :. . .. ..: .:.... : .: : .: .: .: XP_011 QHKEFLRLRRRQKRQNKEEDVTRESRFNFSG---------YGMGHCLQV---------KD 330 340 350 360 420 430 440 450 460 470 pF1KE4 FSIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARA . : . : . :. . : : . ::::: .:: XP_011 GTAVKATPAN-----------PLP----------QPPKDGDAIKKKFVDRAKRIDTISRA 370 380 390 400 480 490 pF1KE4 LFPFCFLFFNVIYWSIYL ::. ::.::..:: : XP_011 AFPLAFLIFNIFYWITYKIIRHEDVHKK 410 420 430 >>XP_011543797 (OMIM: 305990) PREDICTED: glycine recepto (436 aa) initn: 1261 init1: 479 opt: 1220 Z-score: 1512.4 bits: 289.1 E(85289): 1.7e-77 Smith-Waterman score: 1265; 46.0% identity (66.5% similar) in 478 aa overlap (20-496:9-425) 10 20 30 40 50 60 pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL :. :...:..:: ::: . :.. .... XP_011 MNLHMRMTAFCKDHDSRSGKQ-------PSQTLS------PSDFLDKLM 10 20 30 70 80 90 100 110 120 pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS .: .:: :::::::: ::.:. :::::::::. ::::::::::::::.::: :: : XP_011 GRT-SGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAY-S 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT .. .:.: .::.: .:::::::::::.::::::: .: :: : ..: :: :.::..: XP_011 EY-PDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLT 100 110 120 130 140 150 190 200 210 220 230 pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIKKEDIE ::::.:: ::::.: : ::::::::: .:: : : : :::. : ..:::: : ::. : XP_011 LSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF-ILKEEKE 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE4 YGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARV : :::.:. :: .::.:: : :.::.:.:.. .: :.::::.:::.::::: ::. ::: XP_011 LGYCTKHYN-TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV 220 230 240 250 260 270 300 310 320 330 340 350 pF1KE4 PLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKR ::: .::..... . : :::::::::.:.:. .:::: ::.:.:::.:. . .: XP_011 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFV----SR 280 290 300 310 320 360 370 380 390 400 410 pF1KE4 VEAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSND . : :. . .. ..: .:.... : .: : .: .: .: XP_011 QHKEFLRLRRRQKRQNKEEDVTRESRFNFSG---------YGMGHCLQV---------KD 330 340 350 360 420 430 440 450 460 470 pF1KE4 FSIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARA . : . : . :. . : : . ::::: .:: XP_011 GTAVKATPAN-----------PLP----------QPPKDGDAIKKKFVDRAKRIDTISRA 370 380 390 400 480 490 pF1KE4 LFPFCFLFFNVIYWSIYL ::. ::.::..:: : XP_011 AFPLAFLIFNIFYWITYKIIRHEDVHKK 410 420 430 >>XP_006724550 (OMIM: 305990) PREDICTED: glycine recepto (436 aa) initn: 1261 init1: 479 opt: 1220 Z-score: 1512.4 bits: 289.1 E(85289): 1.7e-77 Smith-Waterman score: 1265; 46.0% identity (66.5% similar) in 478 aa overlap (20-496:9-425) 10 20 30 40 50 60 pF1KE4 MKFLLTTAFLILISLWVEEAYSKEKSSKKGKGKKKQYLCPSQQSAEDLARVPANSTSNIL :. :...:..:: ::: . :.. .... XP_006 MNLHMRMTAFCKDHDSRSGKQ-------PSQTLS------PSDFLDKLM 10 20 30 70 80 90 100 110 120 pF1KE4 NRLLVSYDPRIRPNFKGIPVDVVVNIFINSFGSIQETTMDYRVNIFLRQKWNDPRLKLPS .: .:: :::::::: ::.:. :::::::::. ::::::::::::::.::: :: : XP_006 GRT-SGYDARIRPNFKGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQQWNDSRLAY-S 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE4 DFRGSDALTVDPTMYKCLWKPDLFFANEKSANFHDVTQENILLFIFRDGDVLVSMRLSIT .. .:.: .::.: .:::::::::::.::::::: .: :: : ..: :: :.::..: XP_006 EY-PDDSLDLDPSMLDSIWKPDLFFANEKGANFHDVTTDNKLLRISKNGKVLYSIRLTLT 100 110 120 130 140 150 190 200 210 220 230 pF1KE4 LSCPLDLTLFPMDTQRCKMQLESFGYTTDDLRFIWQSGDPVQL-EKIALPQFDIKKEDIE ::::.:: ::::.: : ::::::::: .:: : : : :::. : ..:::: : ::. : XP_006 LSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGPVQVAEGLTLPQF-ILKEEKE 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE4 YGNCTKYYKGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARV : :::.:. :: .::.:: : :.::.:.:.. .: :.::::.:::.::::: ::. ::: XP_006 LGYCTKHYN-TGKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARV 220 230 240 250 260 270 300 310 320 330 340 350 pF1KE4 PLGIFSVLSLASECTTLAAELPKVSYVKALDVWLIACLLFGFASLVEYAVVQVMLNNPKR ::: .::..... . : :::::::::.:.:. .:::: ::.:.:::.:. . .: XP_006 ALGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFV----SR 280 290 300 310 320 360 370 380 390 400 410 pF1KE4 VEAEKARIAKAEQADGKGGNVAKKNTVNGTGTPVHISTLQVGETRCKKVCTSKSDLRSND . : :. . .. ..: .:.... : .: : .: .: .: XP_006 QHKEFLRLRRRQKRQNKEEDVTRESRFNFSG---------YGMGHCLQV---------KD 330 340 350 360 420 430 440 450 460 470 pF1KE4 FSIVGSLPRDFELSNYDCYGKPIEVNNGLGKSQAKNNKKPPPAKPVIPTAAKRIDLYARA . : . : . :. . : : . ::::: .:: XP_006 GTAVKATPAN-----------PLP----------QPPKDGDAIKKKFVDRAKRIDTISRA 370 380 390 400 480 490 pF1KE4 LFPFCFLFFNVIYWSIYL ::. ::.::..:: : XP_006 AFPLAFLIFNIFYWITYKIIRHEDVHKK 410 420 430 497 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:52:16 2016 done: Sun Nov 6 00:52:18 2016 Total Scan time: 9.090 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]