Result of FASTA (ccds) for
pFN21AE1412
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1412, 149 aa
1>>>pF1KE1412 149 - 149 aa - 149 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6517+/-0.000947; mu= 10.5877+/- 0.057
mean_var=103.7743+/-20.573, 0's: 0 Z-trim(107.8): 143 B-trim: 5 in 1/51
Lambda= 0.125901
statistics sampled from 9609 (9781) to 9609 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.682), E-opt: 0.2 (0.3), width: 16
Scan time: 1.750
The best scores are: opt bits E(32554)
CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 ( 149) 970 186.1 6.7e-48
CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 ( 149) 855 165.2 1.3e-41
CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 ( 149) 855 165.2 1.3e-41
CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 ( 149) 855 165.2 1.3e-41
CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 ( 172) 494 99.7 7.9e-22
CCDS2857.1 TNNC1 gene_id:7134|Hs108|chr3 ( 161) 488 98.6 1.6e-21
CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20 ( 160) 485 98.1 2.3e-21
CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX ( 172) 478 96.8 5.9e-21
CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10 ( 146) 465 94.4 2.7e-20
CCDS31834.1 MYL6 gene_id:4637|Hs108|chr12 ( 151) 430 88.1 2.3e-18
CCDS8906.1 MYL6 gene_id:4637|Hs108|chr12 ( 151) 430 88.1 2.3e-18
CCDS30566.1 CALML6 gene_id:163688|Hs108|chr1 ( 181) 411 84.7 2.8e-17
CCDS9204.1 CABP1 gene_id:9478|Hs108|chr12 ( 167) 409 84.3 3.4e-17
CCDS9205.1 CABP1 gene_id:9478|Hs108|chr12 ( 227) 409 84.4 4.3e-17
CCDS81255.1 CALML6 gene_id:163688|Hs108|chr1 ( 164) 407 83.9 4.4e-17
CCDS8905.1 MYL6B gene_id:140465|Hs108|chr12 ( 208) 406 83.8 5.9e-17
CCDS2391.1 MYL1 gene_id:4632|Hs108|chr2 ( 150) 404 83.3 6e-17
CCDS31913.1 CABP1 gene_id:9478|Hs108|chr12 ( 370) 409 84.6 6.1e-17
CCDS2390.1 MYL1 gene_id:4632|Hs108|chr2 ( 194) 404 83.4 7.2e-17
CCDS13276.1 MYL9 gene_id:10398|Hs108|chr20 ( 172) 402 83.0 8.5e-17
CCDS12709.1 CABP5 gene_id:56344|Hs108|chr19 ( 173) 398 82.3 1.4e-16
CCDS8170.1 CABP2 gene_id:51475|Hs108|chr11 ( 220) 391 81.1 4e-16
CCDS10226.2 CALML4 gene_id:91860|Hs108|chr15 ( 196) 388 80.5 5.4e-16
CCDS2746.1 MYL3 gene_id:4634|Hs108|chr3 ( 195) 387 80.4 6.1e-16
CCDS11831.1 MYL12B gene_id:103910|Hs108|chr18 ( 172) 384 79.8 8.2e-16
CCDS73333.1 CABP4 gene_id:57010|Hs108|chr11 ( 170) 378 78.7 1.7e-15
CCDS11830.1 MYL12A gene_id:10627|Hs108|chr18 ( 171) 378 78.7 1.7e-15
CCDS77145.1 MYL12A gene_id:10627|Hs108|chr18 ( 177) 378 78.7 1.8e-15
CCDS4066.1 CETN3 gene_id:1070|Hs108|chr5 ( 167) 376 78.3 2.2e-15
CCDS8166.1 CABP4 gene_id:57010|Hs108|chr11 ( 275) 378 78.9 2.4e-15
CCDS11510.1 MYL4 gene_id:4635|Hs108|chr17 ( 197) 364 76.2 1.1e-14
CCDS75274.1 CETN3 gene_id:1070|Hs108|chr5 ( 191) 341 72.0 2e-13
CCDS31082.1 EFCAB2 gene_id:84288|Hs108|chr1 ( 162) 321 68.3 2.2e-12
CCDS31901.1 MYL2 gene_id:4633|Hs108|chr12 ( 166) 306 65.6 1.5e-11
CCDS66808.1 CALML4 gene_id:91860|Hs108|chr15 ( 120) 294 63.3 5.3e-11
CCDS43197.1 MYL5 gene_id:4636|Hs108|chr4 ( 173) 293 63.2 7.8e-11
>>CCDS7069.1 CALML3 gene_id:810|Hs108|chr10 (149 aa)
initn: 970 init1: 970 opt: 970 Z-score: 973.4 bits: 186.1 E(32554): 6.7e-48
Smith-Waterman score: 970; 100.0% identity (100.0% similar) in 149 aa overlap (1-149:1-149)
10 20 30 40 50 60
pF1KE1 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS70 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS70 NGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE
70 80 90 100 110 120
130 140
pF1KE1 EVDEMIRAADTDGDGQVNYEEFVRVLVSK
:::::::::::::::::::::::::::::
CCDS70 EVDEMIRAADTDGDGQVNYEEFVRVLVSK
130 140
>>CCDS33061.1 CALM3 gene_id:808|Hs108|chr19 (149 aa)
initn: 1125 init1: 855 opt: 855 Z-score: 860.5 bits: 165.2 E(32554): 1.3e-41
Smith-Waterman score: 855; 84.6% identity (96.0% similar) in 149 aa overlap (1-149:1-149)
10 20 30 40 50 60
pF1KE1 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDG
:::::::::..::::::::::::::: :::.::::::::::::::::::.::..:.: ::
CCDS33 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE
:::.:::::: ::::::::::.:::::::::::::::::..:::::::::: :::::.::
CCDS33 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
70 80 90 100 110 120
130 140
pF1KE1 EVDEMIRAADTDGDGQVNYEEFVRVLVSK
::::::: :: ::::::::::::.....:
CCDS33 EVDEMIREADIDGDGQVNYEEFVQMMTAK
130 140
>>CCDS9892.1 CALM1 gene_id:801|Hs108|chr14 (149 aa)
initn: 1125 init1: 855 opt: 855 Z-score: 860.5 bits: 165.2 E(32554): 1.3e-41
Smith-Waterman score: 855; 84.6% identity (96.0% similar) in 149 aa overlap (1-149:1-149)
10 20 30 40 50 60
pF1KE1 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDG
:::::::::..::::::::::::::: :::.::::::::::::::::::.::..:.: ::
CCDS98 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE
:::.:::::: ::::::::::.:::::::::::::::::..:::::::::: :::::.::
CCDS98 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
70 80 90 100 110 120
130 140
pF1KE1 EVDEMIRAADTDGDGQVNYEEFVRVLVSK
::::::: :: ::::::::::::.....:
CCDS98 EVDEMIREADIDGDGQVNYEEFVQMMTAK
130 140
>>CCDS1832.1 CALM2 gene_id:805|Hs108|chr2 (149 aa)
initn: 1125 init1: 855 opt: 855 Z-score: 860.5 bits: 165.2 E(32554): 1.3e-41
Smith-Waterman score: 855; 84.6% identity (96.0% similar) in 149 aa overlap (1-149:1-149)
10 20 30 40 50 60
pF1KE1 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDG
:::::::::..::::::::::::::: :::.::::::::::::::::::.::..:.: ::
CCDS18 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE
:::.:::::: ::::::::::.:::::::::::::::::..:::::::::: :::::.::
CCDS18 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE
70 80 90 100 110 120
130 140
pF1KE1 EVDEMIRAADTDGDGQVNYEEFVRVLVSK
::::::: :: ::::::::::::.....:
CCDS18 EVDEMIREADIDGDGQVNYEEFVQMMTAK
130 140
>>CCDS11820.1 CETN1 gene_id:1068|Hs108|chr18 (172 aa)
initn: 647 init1: 492 opt: 494 Z-score: 505.4 bits: 99.7 E(32554): 7.9e-22
Smith-Waterman score: 494; 50.3% identity (82.5% similar) in 143 aa overlap (4-146:24-166)
10 20 30 40
pF1KE1 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSL
.:::.: : .:::.::: ::.: : ..:: ..::.:
CCDS11 MASGFKKPSAASTGQKRKVAPKPELTEDQKQEVREAFDLFDVDGSGTIDAKELKVAMRAL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 GQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGF
: .: . :.. :.::.::.:.: ..: .::..:..::.. :..::: .:::.:: : .:
CCDS11 GFEPRKEEMKKMISEVDREGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGK
70 80 90 100 110 120
110 120 130 140
pF1KE1 VSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK
.: .:..: ..:::.:.:::..::: :: ::::.:: :::.:..
CCDS11 ISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIMKKTSLY
130 140 150 160 170
>>CCDS2857.1 TNNC1 gene_id:7134|Hs108|chr3 (161 aa)
initn: 496 init1: 264 opt: 488 Z-score: 499.8 bits: 98.6 E(32554): 1.6e-21
Smith-Waterman score: 488; 47.3% identity (80.4% similar) in 148 aa overlap (3-146:10-157)
10 20 30 40 50
pF1KE1 MADQLTEEQVTEFKEAFSLFDKDG-DGCITTRELGTVMRSLGQNPTEAELRDM
.:::::: .::: ::..: . ::::.:.::: ::: :::::: ::..:
CCDS28 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM
10 20 30 40 50 60
60 70 80 90 100
pF1KE1 MSEIDRDGNGTVDFPEFLGMMARKMKDTD---NEEEIREAFRVFDKDGNGFVSAAELRHV
..:.:.::.::::: ::: ::.: ::: . .:::. . ::.:::...:... ::. .
CCDS28 IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIM
70 80 90 100 110 120
110 120 130 140
pF1KE1 MTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK
. :: .......:... .: ..::...:.::.. .
CCDS28 LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE
130 140 150 160
>>CCDS13375.1 TNNC2 gene_id:7125|Hs108|chr20 (160 aa)
initn: 530 init1: 301 opt: 485 Z-score: 496.9 bits: 98.1 E(32554): 2.3e-21
Smith-Waterman score: 485; 44.8% identity (81.4% similar) in 145 aa overlap (5-146:12-156)
10 20 30 40 50
pF1KE1 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMM
:.::...::: ::..:: :: : :...::::::: :::.::. :: ..
CCDS13 MTDQQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAII
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE1 SEIDRDGNGTVDFPEFLGMMARKMKDT---DNEEEIREAFRVFDKDGNGFVSAAELRHVM
:.:.::.::.:: ::: ::.:.::. .:::. : ::.::....:... :: ...
CCDS13 EEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIF
70 80 90 100 110 120
120 130 140
pF1KE1 TRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK
::...:::.. ... .: ..::.....::....
CCDS13 RASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEGVQ
130 140 150 160
>>CCDS14716.1 CETN2 gene_id:1069|Hs108|chrX (172 aa)
initn: 703 init1: 476 opt: 478 Z-score: 489.7 bits: 96.8 E(32554): 5.9e-21
Smith-Waterman score: 478; 49.0% identity (81.1% similar) in 143 aa overlap (4-146:24-166)
10 20 30 40
pF1KE1 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSL
.::::: :..:::.::: :: : : ..:: ..::.:
CCDS14 MASNFKKANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE1 GQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGF
: .: . :.. :.::::..:.: ..: .:: .:..::.. :..::: .::..:: : .:
CCDS14 GFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGK
70 80 90 100 110 120
110 120 130 140
pF1KE1 VSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK
.: .:..: .:::.:.:::..::: :: ::::.:. .::.:..
CCDS14 ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMKKTSLY
130 140 150 160 170
>>CCDS7068.1 CALML5 gene_id:51806|Hs108|chr10 (146 aa)
initn: 531 init1: 240 opt: 465 Z-score: 477.8 bits: 94.4 E(32554): 2.7e-20
Smith-Waterman score: 465; 47.0% identity (79.9% similar) in 149 aa overlap (1-149:1-146)
10 20 30 40 50 60
pF1KE1 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDG
:: .:: :. ...:.::: : ::.: :...:::..... :.: .::.:: ..::.: ::
CCDS70 MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 NGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDE
.: ..: ::: :.: . . :... :::.::.::.: ... :::..:. ::. : .:
CCDS70 DGEISFQEFL-TAAKKAR--AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQE
70 80 90 100 110
130 140
pF1KE1 EVDEMIRAADTDGDGQVNYEEFVRVLVSK
:.: ::: ::.: ::.::::::.:.:...
CCDS70 ELDAMIREADVDQDGRVNYEEFARMLAQE
120 130 140
>>CCDS31834.1 MYL6 gene_id:4637|Hs108|chr12 (151 aa)
initn: 440 init1: 185 opt: 430 Z-score: 443.3 bits: 88.1 E(32554): 2.3e-18
Smith-Waterman score: 430; 48.0% identity (75.0% similar) in 152 aa overlap (1-148:1-150)
10 20 30 40 50 60
pF1KE1 MADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDG
: : .::.:..::::::.:::. ::: : . : :::.::::::.::. .... :
CCDS31 MCD-FTEDQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDE
10 20 30 40 50
70 80 90 100 110
pF1KE1 NGT--VDFPEFLGMMAR--KMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEK
.. .:: .:: :. : :: . :. :..:::::.::: : .::.:::.. ::::
CCDS31 MNVKVLDFEHFLPMLQTVAKNKDQGTYEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEK
60 70 80 90 100 110
120 130 140
pF1KE1 LSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK
...::: ::. :. :..: .::::.::....
CCDS31 MTEEEV-EMLVAGHEDSNGCINYEELVRMVLNG
120 130 140 150
149 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 00:07:58 2016 done: Mon Nov 7 00:07:58 2016
Total Scan time: 1.750 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]