FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4515, 547 aa 1>>>pF1KE4515 547 - 547 aa - 547 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3004+/-0.000461; mu= 18.7506+/- 0.029 mean_var=70.8342+/-14.578, 0's: 0 Z-trim(109.6): 50 B-trim: 159 in 1/49 Lambda= 0.152389 statistics sampled from 17824 (17837) to 17824 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.562), E-opt: 0.2 (0.209), width: 16 Scan time: 8.570 The best scores are: opt bits E(85289) NP_060882 (OMIM: 600833) suppressor of tumorigenic ( 554) 3622 806.1 0 NP_068708 (OMIM: 600833) suppressor of tumorigenic ( 585) 2049 460.3 7.4e-129 >>NP_060882 (OMIM: 600833) suppressor of tumorigenicity (554 aa) initn: 2897 init1: 2897 opt: 3622 Z-score: 4303.7 bits: 806.1 E(85289): 0 Smith-Waterman score: 3622; 98.7% identity (98.7% similar) in 554 aa overlap (1-547:1-554) 10 20 30 40 50 60 pF1KE4 MAEAATGFLEQLKSCIVWSWTYLWTVWFFIVLFLVYILRVPLKINDNLSTVSMFLNTLTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 MAEAATGFLEQLKSCIVWSWTYLWTVWFFIVLFLVYILRVPLKINDNLSTVSMFLNTLTP 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 KFYVALTGTSSLISGLILIFEWWYFRKYGTSFIEQVSVSHLRPLLGGVDNNSSNNS---- :::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 KFYVALTGTSSLISGLILIFEWWYFRKYGTSFIEQVSVSHLRPLLGGVDNNSSNNSNSSN 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 ---DSNRQSVSECKVWRNPLNLFRGAEYNRYTWVTGREPLTYYDMNLSAQDHQTFFTCDS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 GDSDSNRQSVSECKVWRNPLNLFRGAEYNRYTWVTGREPLTYYDMNLSAQDHQTFFTCDS 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 DHLRPADAIMQKAWRERNPQARISAAHEALEINECATAYILLAEEEATTIAEAEKLFKQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 DHLRPADAIMQKAWRERNPQARISAAHEALEINECATAYILLAEEEATTIAEAEKLFKQA 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 LKAGDGCYRRSQQLQHHGSQYEAQHRRDTNVLVYIKRRLAMCARRLGRTREAVKMMRDLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 LKAGDGCYRRSQQLQHHGSQYEAQHRRDTNVLVYIKRRLAMCARRLGRTREAVKMMRDLM 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 KEFPLLSMFNIHENLLEALLELQAYADVQAVLAKYDDISLPKSATICYTAALLKARAVSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 KEFPLLSMFNIHENLLEALLELQAYADVQAVLAKYDDISLPKSATICYTAALLKARAVSD 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE4 KFSPEAASRRGLSTAEMNAVEAIHRAVEFNPHVPKYLLEMKSLILPPEHILKRGDSEAIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 KFSPEAASRRGLSTAEMNAVEAIHRAVEFNPHVPKYLLEMKSLILPPEHILKRGDSEAIA 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE4 YAFFHLAHWKRVEGALNLLHCTWEGTFRMIPYPLEKGHLFYPYPICTETADRELLPSFHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 YAFFHLAHWKRVEGALNLLHCTWEGTFRMIPYPLEKGHLFYPYPICTETADRELLPSFHE 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE4 VSVYPKKELPFFILFTAGLCSFTAMLALLTHQFPELMGVFAKAFLSTLFAPLNFVMEKVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_060 VSVYPKKELPFFILFTAGLCSFTAMLALLTHQFPELMGVFAKAFLSTLFAPLNFVMEKVE 490 500 510 520 530 540 540 pF1KE4 SILPSSLWHQLTRI :::::::::::::: NP_060 SILPSSLWHQLTRI 550 >>NP_068708 (OMIM: 600833) suppressor of tumorigenicity (585 aa) initn: 2806 init1: 2042 opt: 2049 Z-score: 2434.4 bits: 460.3 E(85289): 7.4e-129 Smith-Waterman score: 3371; 91.9% identity (93.3% similar) in 566 aa overlap (1-536:1-565) 10 20 30 40 50 60 pF1KE4 MAEAATGFLEQLKSCIVWSWTYLWTVWFFIVLFLVYILRVPLKINDNLSTVSMFLNTLTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 MAEAATGFLEQLKSCIVWSWTYLWTVWFFIVLFLVYILRVPLKINDNLSTVSMFLNTLTP 10 20 30 40 50 60 70 80 90 100 110 pF1KE4 KFYVALTGTSSLISGLILIFEWWYFRKYGTSFIEQVSVSHLRPLLGGVDNNSSNNS---- :::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 KFYVALTGTSSLISGLILIFEWWYFRKYGTSFIEQVSVSHLRPLLGGVDNNSSNNSNSSN 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 ---DSNRQSVSECKVWRNPLNLFRGAEYNRYTWVTGREPLTYYDMNLSAQDHQTFFTCDS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 GDSDSNRQSVSECKVWRNPLNLFRGAEYNRYTWVTGREPLTYYDMNLSAQDHQTFFTCDS 130 140 150 160 170 180 180 190 200 210 pF1KE4 DHLRPADAIMQKAWRERNPQARISAAHEALEINE-----------------------CAT :::::::::::::::::::::::::::::::::: ::: NP_068 DHLRPADAIMQKAWRERNPQARISAAHEALEINEIRSRVEVPLIASSTIWEIKLLPKCAT 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE4 AYILLAEEEATTIAEAEKLFKQALKAGDGCYRRSQQLQHHGSQYEAQHRRDTNVLVYIKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 AYILLAEEEATTIAEAEKLFKQALKAGDGCYRRSQQLQHHGSQYEAQHRRDTNVLVYIKR 250 260 270 280 290 300 280 290 300 310 320 330 pF1KE4 RLAMCARRLGRTREAVKMMRDLMKEFPLLSMFNIHENLLEALLELQAYADVQAVLAKYDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 RLAMCARRLGRTREAVKMMRDLMKEFPLLSMFNIHENLLEALLELQAYADVQAVLAKYDD 310 320 330 340 350 360 340 350 360 370 380 390 pF1KE4 ISLPKSATICYTAALLKARAVSDKFSPEAASRRGLSTAEMNAVEAIHRAVEFNPHVPKYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 ISLPKSATICYTAALLKARAVSDKFSPEAASRRGLSTAEMNAVEAIHRAVEFNPHVPKYL 370 380 390 400 410 420 400 410 420 430 440 450 pF1KE4 LEMKSLILPPEHILKRGDSEAIAYAFFHLAHWKRVEGALNLLHCTWEGTFRMIPYPLEKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 LEMKSLILPPEHILKRGDSEAIAYAFFHLAHWKRVEGALNLLHCTWEGTFRMIPYPLEKG 430 440 450 460 470 480 460 470 480 490 500 510 pF1KE4 HLFYPYPICTETADRELLPSFHEVSVYPKKELPFFILFTAGLCSFTAMLALLTHQFPELM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 HLFYPYPICTETADRELLPSFHEVSVYPKKELPFFILFTAGLCSFTAMLALLTHQFPELM 490 500 510 520 530 540 520 530 540 pF1KE4 GVFAKAFLSTLFAPLNFVMEKVESILPSSLWHQLTRI ::::::... .: .: . .::. NP_068 GVFAKAMID-IFCSAEFRDWNCKSIFMRVEDELEIPPAPQSQHFQN 550 560 570 580 547 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:19:21 2016 done: Sun Nov 6 00:19:22 2016 Total Scan time: 8.570 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]